PNPLA7

General Information

Gene Name       : PNPLA7
Gene ID             : ENSG00000130653.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PNPLA7)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PNPLA7ENSG00000130653.150.200.280.24ENCSR000AEF
HepG2PNPLA7ENSG00000130653.150.720.330.53ENCSR985KAT
K562PNPLA7ENSG00000130653.150.320.210.27ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PNPLA7 is not avaliable on ENCORE database.



Proteins bound to RNA
  • PNPLA7 RNA is bound by 13 proteins.  







eCLIP assay for PNPLA7 is not avaliable on ENCORE database.





13 proteins are bound to PNPLA7 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr9140403865140403965-intron-Distal4.9428310.58655HepG2QKI
chr9140403750140403793-intron-Distal5.142554.55788HepG2QKI
chr9140411185140411267-intron-Distal5.578367.46998K562DDX52
chr9140411420140411530-intron-Distal4.949785.19708K562TBRG4
chr9140403545140403741-intron-Distal3.419353.84589K562HNRNPL
chr9140403570140403750-intron-Distal7.2247924.70513HepG2QKI
chr9140410138140410194-intron-Distal4.457765.60609HepG2CSTF2T
chr9140410134140410216-intron-Distal6.1066614.31554HepG2FAM120A
chr9140410715140410785-intron-Distal3.009613.27222HepG2CSTF2T
chr9140410018140410119-intron-Distal,intron-Proximal3.034563.41236HepG2CSTF2T
chr9140410131140410216-intron-Distal3.873053.14375HepG2RBFOX2
chr9140411370140411494-intron-Distal5.9088710.78898HepG2DKC1
chr9140411387140411508-intron-Distal3.640224.32275HepG2FAM120A
chr9140411371140411489-intron-Distal5.985425.60708K562DDX52
chr9140410799140410896-intron-Distal3.790555.08839HepG2CSTF2T
chr9140403509140403570-intron-Distal5.421298.71243HepG2QKI
chr9140403515140403664-intron-Distal3.951904.01234HepG2HNRNPL
chr9140411380140411468-intron-Distal3.135383.48399HepG2CSTF2T
chr9140411393140411505-intron-Distal6.2802313.45380K562EIF4G2
chr9140414106140414351-intron-Distal,intron-Proximal3.116735.14763HepG2HNRNPK
chr9140410129140410195-intron-Distal3.491294.25667K562CSTF2T
chr9140411397140411474-intron-Distal4.979956.58558K562DHX30
chr9140411380140411508-intron-Distal4.512824.71107K562CSTF2T
chr9140411374140411481-intron-Distal6.226679.65924K562GEMIN5
chr9140411386140411489-intron-Distal5.536187.49354K562DDX6
chr9140410126140410203-intron-Distal4.906326.77594K562FAM120A
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PNPLA7 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PNPLA7 is not available on ENCORE database.

  • 69 RBPs can affect the levels of PNPLA7.  








The Knockdown/knockout RNA-Seq assay for PNPLA7 is not available on ENCORE database.





69 RBPs can affect the gene expression of PNPLA7 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PNPLA7ENSG00000130653.1131.6968078.87920-1.315302.907101.81310HepG2AATF
PNPLA7ENSG00000130653.1170.59290170.41370-1.271408.484207.53810HepG2ACO1
PNPLA7ENSG00000130653.11135.8003057.654301.235904.315203.09920HepG2ADAR
PNPLA7ENSG00000130653.1146.69710199.02140-2.091505.031604.34060HepG2AKAP1
PNPLA7ENSG00000130653.11120.1548050.216001.258602.704601.81440HepG2BCLAF1
PNPLA7ENSG00000130653.1171.4503028.757901.312902.968902.35170HepG2BOP1
PNPLA7ENSG00000130653.11174.02110102.359400.765502.743801.77270HepG2CCAR1
PNPLA7ENSG00000130653.11118.51090170.34370-0.523402.186201.58410HepG2CKAP4
PNPLA7ENSG00000130653.1133.3093080.84580-1.279202.670901.35000HepG2CSTF2T
PNPLA7ENSG00000130653.11101.2319057.542500.814902.939002.26970HepG2DNAJC2
PNPLA7ENSG00000130653.11171.7789080.117801.100305.297704.19020HepG2EIF4G2
PNPLA7ENSG00000130653.1192.91460166.49540-0.841503.959102.96120HepG2EWSR1
PNPLA7ENSG00000130653.1185.57590139.33740-0.703302.243801.54650HepG2FIP1L1
PNPLA7ENSG00000130653.11146.1873029.909402.2890011.051109.83650HepG2GPKOW
PNPLA7ENSG00000130653.11147.6127065.194201.178904.100903.26900HepG2HNRNPC
PNPLA7ENSG00000130653.11101.2082034.209501.564806.195005.18000HepG2HNRNPF
PNPLA7ENSG00000130653.1147.3296096.10720-1.021903.462402.40730HepG2HNRNPM
PNPLA7ENSG00000130653.11137.1733033.684402.0257011.5387010.15860HepG2IGF2BP1
PNPLA7ENSG00000130653.1136.97000155.41250-2.071704.566503.31340HepG2IGF2BP3
PNPLA7ENSG00000130653.1160.55640112.72350-0.896403.111402.25590HepG2MSI2
PNPLA7ENSG00000130653.1182.7506029.140101.505703.042802.02430HepG2MTPAP
PNPLA7ENSG00000130653.1162.3866025.319501.300902.508501.79510HepG2NSUN2
PNPLA7ENSG00000130653.11126.2329055.377301.188604.157503.05380HepG2PABPC1
PNPLA7ENSG00000130653.1162.50890184.92180-1.5648011.4277010.33070HepG2PCBP1
PNPLA7ENSG00000130653.11106.6368057.763600.884403.226402.43590HepG2PPIL4
PNPLA7ENSG00000130653.11108.4477068.861600.655102.118501.43370HepG2PRPF4
PNPLA7ENSG00000130653.1112.5326043.80290-1.805303.765502.84100HepG2PRPF8
PNPLA7ENSG00000130653.11119.41450188.18340-0.656203.166102.58850HepG2PTBP1
PNPLA7ENSG00000130653.11409.9500080.257402.3526035.0426033.21680HepG2PUF60
PNPLA7ENSG00000130653.1154.3360085.18540-0.648701.967101.45010HepG2PUM1
PNPLA7ENSG00000130653.1115.8231068.57100-2.115603.037902.30130HepG2RAVER1
PNPLA7ENSG00000130653.1141.90500158.25720-1.9171012.2463011.31590HepG2RBM22
PNPLA7ENSG00000130653.11114.51740184.94730-0.691502.863502.17970HepG2RBM25
PNPLA7ENSG00000130653.11140.3102077.226200.861402.353801.37910HepG2RCC2
PNPLA7ENSG00000130653.11145.05790209.41470-0.529702.105101.62010HepG2NELFE
PNPLA7ENSG00000130653.11124.25890195.06930-0.650602.824902.20240HepG2RECQL
PNPLA7ENSG00000130653.11132.0573067.458600.969002.514101.61110HepG2RPS10
PNPLA7ENSG00000130653.11108.0403060.917900.826502.209401.49390HepG2RPS3A
PNPLA7ENSG00000130653.11117.5543057.674501.027204.330703.55620HepG2SAFB2
PNPLA7ENSG00000130653.1153.83470203.05800-1.9153014.0196012.43750HepG2SF3A3
PNPLA7ENSG00000130653.1179.47680195.89000-1.301408.342507.40220HepG2SF3B4
PNPLA7ENSG00000130653.11160.8416076.931001.063905.572604.63480HepG2SLBP
PNPLA7ENSG00000130653.11138.6112067.007201.048603.685201.81480HepG2SND1
PNPLA7ENSG00000130653.1182.6870031.430901.395403.193102.35230HepG2SNRNP70
PNPLA7ENSG00000130653.11105.35730178.74420-0.762603.899003.33440HepG2SRFBP1
PNPLA7ENSG00000130653.1129.14140204.48030-2.8108025.7421024.61820HepG2SRSF1
PNPLA7ENSG00000130653.11182.9487079.228801.207205.750304.89580HepG2SRSF5
PNPLA7ENSG00000130653.1196.9793033.617101.528405.813404.86510HepG2SRSF7
PNPLA7ENSG00000130653.11287.68000155.189700.890307.357306.59840HepG2SSB
PNPLA7ENSG00000130653.1197.1198053.033800.872802.499601.46270HepG2STIP1
PNPLA7ENSG00000130653.11121.72800183.83250-0.594702.334001.81210HepG2TAF15
PNPLA7ENSG00000130653.11109.08920168.87710-0.630502.504201.70670HepG2TIA1
PNPLA7ENSG00000130653.11118.3522062.929500.911203.401302.85780HepG2TIAL1
PNPLA7ENSG00000130653.11123.7617063.492100.962804.315003.64120HepG2TRIM56
PNPLA7ENSG00000130653.11132.0303078.389500.752002.345801.54840HepG2TUFM
PNPLA7ENSG00000130653.1141.82530119.16730-1.510506.606705.64920HepG2U2AF1
PNPLA7ENSG00000130653.11306.20600180.081300.765803.357502.60080HepG2UPF1
PNPLA7ENSG00000130653.1177.01650173.86160-1.174706.996306.11800HepG2UTP3
PNPLA7ENSG00000130653.11113.3706054.571101.054702.923401.79050HepG2XPO5
PNPLA7ENSG00000130653.11138.0629055.697601.309504.198103.31150HepG2XRN2
PNPLA7ENSG00000130653.1198.87420198.05510-1.002206.831206.07170HepG2ZNF622
PNPLA7ENSG00000130653.1177.8202031.655601.297603.726202.60460K562BCLAF1
PNPLA7ENSG00000130653.11132.0809082.564800.677702.408201.32210K562CCDC124
PNPLA7ENSG00000130653.1152.9606022.763601.218102.449801.70820K562CPSF6
PNPLA7ENSG00000130653.1148.2173019.642901.295402.566201.68890K562FTO
PNPLA7ENSG00000130653.111.1235010.82540-3.268402.004901.41550K562G3BP2
PNPLA7ENSG00000130653.1163.5630021.729901.548403.875002.94290K562GPKOW
PNPLA7ENSG00000130653.11138.2384037.174901.894709.867508.79600K562HNRNPC
PNPLA7ENSG00000130653.1140.9441085.46820-1.061703.067502.10140K562MBNL1
PNPLA7ENSG00000130653.11128.1739050.104501.355006.686205.59360K562NSUN2
PNPLA7ENSG00000130653.1187.2810041.680601.066202.520601.35550K562PABPC1
PNPLA7ENSG00000130653.11142.5650076.443500.899103.509302.59240K562PUF60
PNPLA7ENSG00000130653.11130.6089079.667400.713102.371501.48140K562PUM2
PNPLA7ENSG00000130653.1192.3234049.440900.900902.801501.98250K562SF3A3
PNPLA7ENSG00000130653.11116.0404053.126901.127004.758903.84300K562UPF1
PNPLA7ENSG00000130653.1195.4246045.458901.069703.722702.70710K562WDR3
PNPLA7ENSG00000130653.11106.0228054.494600.960103.529402.53370K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PNPLA7 is not available on ENCORE database.





1 RBPs can affect the splicing of PNPLA7 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
RIPNPLA7ENSG00000130653.11chr9-140358577140358908140358577140358647140358791140358908-0.758000.001510.07274excludedK562DROSHA

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for PNPLA7 is not avaliable on ENCORE database.