LPPR3

General Information

Gene Name       : LPPR3
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: LPPR3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for LPPR3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • LPPR3 RNA is bound by 6 proteins.  







eCLIP assay for LPPR3 is not avaliable on ENCORE database.





6 proteins are bound to LPPR3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr19821912821947-5'-UTR,intron-Distal4.911403.28019K562DDX3X
chr19814504814605-CDS,intron-Distal,intron-Proximal3.712478.50021K562YBX3
chr19815076815174-CDS,intron-Distal,intron-Proximal3.986075.26367K562AQR
chr19821109821160-intron-Distal4.390963.26170K562EIF4G2
chr19816010816103-intron-Distal4.402215.62460K562CSTF2T
chr19816029816071-intron-Distal4.840964.67055K562EIF4G2
chr19816481816569-intron-Distal5.988698.53131K562EIF4G2
chr19821017821139-intron-Distal4.776095.20271K562FAM120A
chr19815918816008-intron-Distal,intron-Proximal4.187793.80512K562CSTF2T
chr19815916816078-intron-Distal,intron-Proximal4.7780212.02341K562FAM120A
chr19816658816764-intron-Distal5.3816412.41769K562EIF4G2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for LPPR3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for LPPR3 is not available on ENCORE database.

  • 46 RBPs can affect the levels of LPPR3.  








The Knockdown/knockout RNA-Seq assay for LPPR3 is not available on ENCORE database.





46 RBPs can affect the gene expression of LPPR3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
LPPR3ENSG00000129951.1411.459600.625804.194602.084201.61510HepG2AKAP1
LPPR3ENSG00000129951.1415.253600.513804.891703.534902.84460HepG2DDX6
LPPR3ENSG00000129951.1412.719500.551004.528802.851702.14940HepG2FXR1
LPPR3ENSG00000129951.141.6894012.74300-2.915102.106601.47430HepG2HNRNPF
LPPR3ENSG00000129951.1424.548800.554705.467705.573904.70390HepG2MATR3
LPPR3ENSG00000129951.1435.035906.304402.474304.270803.66340HepG2RBM22
LPPR3ENSG00000129951.1458.162703.537104.0393010.836309.71510HepG2RPS19
LPPR3ENSG00000129951.1421.413506.528901.713501.965801.40870HepG2SMN1
LPPR3ENSG00000129951.1432.873506.107002.428304.257103.66480HepG2TIAL1
LPPR3ENSG00000129951.14394.33200304.930100.370802.289401.76530K562AGGF1
LPPR3ENSG00000129951.14518.83790335.096600.630605.449603.95990K562AKAP8
LPPR3ENSG00000129951.1497.67520259.89430-1.411909.609808.62050K562AQR
LPPR3ENSG00000129951.14489.32670332.935100.555505.038103.76440K562ATP5C1
LPPR3ENSG00000129951.14529.39530364.388600.538804.615603.05450K562CCDC124
LPPR3ENSG00000129951.14558.55230316.299500.820309.622607.56040K562CPEB4
LPPR3ENSG00000129951.14169.1427080.331701.074103.074301.95470K562CSTF2
LPPR3ENSG00000129951.14289.69720442.66240-0.611704.623503.35250K562CELF1
LPPR3ENSG00000129951.14535.91040167.298901.6795030.1278028.21720K562EIF2S2
LPPR3ENSG00000129951.1420.8619057.44770-1.461404.026602.37530K562FUS
LPPR3ENSG00000129951.14148.43290218.41920-0.557302.683902.08670K562FXR1
LPPR3ENSG00000129951.1410.5237033.98600-1.691302.300801.66370K562G3BP2
LPPR3ENSG00000129951.14248.95340339.57080-0.447802.594501.49150K562GLRX3
LPPR3ENSG00000129951.14100.17730180.71920-0.851203.603302.93350K562HNRNPC
LPPR3ENSG00000129951.14415.41910221.333300.908207.438606.14990K562HSPD1
LPPR3ENSG00000129951.14134.8135078.203100.785602.779701.58700K562IGF2BP3
LPPR3ENSG00000129951.14186.9632080.746301.211207.991206.52980K562MAGOH
LPPR3ENSG00000129951.14223.34010383.65290-0.780605.864804.22960K562MSI2
LPPR3ENSG00000129951.14259.11280357.01520-0.462402.825302.00770K562MTPAP
LPPR3ENSG00000129951.14125.31100209.74040-0.743103.653402.22120K562NCBP2
LPPR3ENSG00000129951.14256.3131099.470401.365503.272901.83910K562NONO
LPPR3ENSG00000129951.14104.01370260.37460-1.323805.856704.64090K562PCBP3
LPPR3ENSG00000129951.14540.15110369.859900.546303.409901.82000K562PNPT1
LPPR3ENSG00000129951.1480.99750199.70260-1.301908.747607.35590K562POLR2G
LPPR3ENSG00000129951.14262.20910185.325600.500602.262501.52190K562PPIG
LPPR3ENSG00000129951.14252.81750392.71710-0.635403.814002.86040K562PUF60
LPPR3ENSG00000129951.14567.97510409.276100.472703.391802.32740K562PUM2
LPPR3ENSG00000129951.14157.46600314.63100-0.998606.359605.57490K562PUS1
LPPR3ENSG00000129951.14141.9431079.124900.843003.080401.91960K562NELFE
LPPR3ENSG00000129951.14113.42180183.99430-0.698002.894701.41250K562SDAD1
LPPR3ENSG00000129951.14243.74210140.248100.797304.223602.87880K562SRFBP1
LPPR3ENSG00000129951.14228.48460401.01880-0.811608.167706.65850K562SRPK2
LPPR3ENSG00000129951.14239.60390111.772901.100006.575004.83040K562SRSF4
LPPR3ENSG00000129951.14147.5587072.677801.021603.972002.67320K562SRSF5
LPPR3ENSG00000129951.14127.4639077.829800.711602.414201.75080K562TARDBP
LPPR3ENSG00000129951.14201.8832075.081901.426904.111903.08530K562TIA1
LPPR3ENSG00000129951.14153.1526073.734201.054502.316001.33590K562TRA2A
LPPR3ENSG00000129951.14198.34910307.97960-0.634803.899802.35730K562WRN
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for LPPR3 is not available on ENCORE database.





3 RBPs can affect the splicing of LPPR3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
RILPPR3ENSG00000129951.14chr19-8144338147498144338146078146918147490.294000.000010.00040includedK562PRPF8
RILPPR3ENSG00000129951.14chr19-8144338147498144338146078146918147490.229000.000850.03873includedK562SUPV3L1
RILPPR3ENSG00000129951.14chr19-8144338147498144338146078146918147490.247000.000410.00589includedK562EFTUD2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for LPPR3 is not avaliable on ENCORE database.