HNF1A-AS1

General Information

Gene Name       : HNF1A-AS1
Gene ID             : ENSG00000241388.5
Essential Gene : No

Functions

Localization

Domains (AlphaFold: HNF1A-AS1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878HNF1A-AS1ENSG00000241388.50.000.000.00ENCSR000AEF
HepG2HNF1A-AS1ENSG00000241388.54.614.524.56ENCSR985KAT
K562HNF1A-AS1ENSG00000241388.50.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for HNF1A-AS1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • HNF1A-AS1 RNA is bound by 13 proteins.  







eCLIP assay for HNF1A-AS1 is not avaliable on ENCORE database.





13 proteins are bound to HNF1A-AS1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr12121409730121409864-5'-UTR,intron-Distal3.009647.63277HepG2HNRNPL
chr12121416118121416188-intron-Distal5.549768.08201HepG2CDC40
chr12121418148121418203-intron-Distal4.6662510.91534HepG2HNRNPK
chr12121418709121418754-intron-Distal,intron-Proximal3.424373.87702HepG2NCBP2
chr12121413144121413197-intron-Distal4.461199.80775HepG2HNRNPC
chr12121418179121418232-intron-Distal3.3195613.04662HepG2DDX59
chr12121418057121418098-intron-Distal4.077008.81820HepG2XRN2
chr12121416108121416176-intron-Distal3.3984514.03824HepG2DDX59
chr12121417130121417175-intron-Distal3.490189.34800HepG2HNRNPK
chr12121416373121416407-intron-Distal3.9138116.23273HepG2XRN2
chr12121417702121417742-intron-Distal3.464737.38089HepG2DDX59
chr12121416118121416196-intron-Distal3.163636.46594HepG2LARP4
chr12121418262121418355-intron-Distal3.8089420.10740HepG2HNRNPK
chr12121415388121415455-intron-Distal3.004264.26969HepG2HNRNPC
chr12121416142121416229-intron-Distal3.4374513.01536HepG2XRN2
chr12121408296121408437-3'-UTR,intron-Distal3.6287521.01665HepG2HNRNPK
chr12121416407121416441-intron-Distal3.3850115.54808HepG2XRN2
chr12121418482121418513-intron-Distal3.829867.20019HepG2DDX59
chr12121409890121409971-5'-UTR,intron-Distal3.2055616.98414HepG2QKI
chr12121416092121416142-intron-Distal3.0380011.65600HepG2XRN2
chr12121407646121407676-3'-UTR,intron-Distal5.9850123.36936HepG2XPO5
chr12121416375121416469-intron-Distal4.2318715.68997HepG2HNRNPK
chr12121418203121418262-intron-Distal5.2271819.91557HepG2HNRNPK
chr12121417323121417385-intron-Distal3.0283016.83773HepG2RBFOX2
chr12121417954121417995-intron-Distal3.245616.82210HepG2HNRNPK
chr12121418303121418391-intron-Distal3.7303316.88038HepG2XRN2
chr12121418645121418714-intron-Distal,intron-Proximal4.648896.63452HepG2PCBP1
chr12121418359121418410-intron-Distal4.127676.42478HepG2DDX59
chr12121418247121418359-intron-Distal3.8626140.48836HepG2DDX59
chr12121416158121416205-intron-Distal3.139589.72767HepG2PRPF4
chr12121418355121418428-intron-Distal4.1379615.50773HepG2HNRNPK
chr12121407676121407715-3'-UTR,intron-Distal5.1597524.74440HepG2XPO5
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for HNF1A-AS1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for HNF1A-AS1 is not available on ENCORE database.

  • 53 RBPs can affect the levels of HNF1A-AS1.  








The Knockdown/knockout RNA-Seq assay for HNF1A-AS1 is not available on ENCORE database.





53 RBPs can affect the gene expression of HNF1A-AS1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
HNF1A-AS1ENSG00000241388.310.2356036.76670-1.844803.182802.04200HepG2AATF
HNF1A-AS1ENSG00000241388.3150.2391082.571400.863402.315801.45090HepG2ABCF1
HNF1A-AS1ENSG00000241388.32.6995048.43010-4.1651011.5948010.53230HepG2ACO1
HNF1A-AS1ENSG00000241388.31.6436079.15960-5.5899013.6462012.55710HepG2AKAP1
HNF1A-AS1ENSG00000241388.336.2842083.25270-1.198203.453902.29740HepG2AKAP8
HNF1A-AS1ENSG00000241388.330.6489065.48870-1.095401.988601.31840HepG2ASCC1
HNF1A-AS1ENSG00000241388.317.4023068.29920-1.972606.280605.31260HepG2AUH
HNF1A-AS1ENSG00000241388.319.5589048.77750-1.318402.378401.65960HepG2CALR
HNF1A-AS1ENSG00000241388.3115.2759053.393401.110302.527101.86430HepG2CPSF6
HNF1A-AS1ENSG00000241388.39.0213040.71880-2.174304.679103.88240HepG2CELF1
HNF1A-AS1ENSG00000241388.396.7710040.627101.252004.167403.35090HepG2DDX21
HNF1A-AS1ENSG00000241388.324.9192075.80910-1.605103.954203.21800HepG2DDX3X
HNF1A-AS1ENSG00000241388.328.1432060.63270-1.107302.171501.30950HepG2DDX59
HNF1A-AS1ENSG00000241388.36.0052065.16830-3.439908.578807.54990HepG2DDX6
HNF1A-AS1ENSG00000241388.352.2081022.617101.206802.646001.68450HepG2DHX30
HNF1A-AS1ENSG00000241388.383.1291046.339700.843002.255001.63330HepG2DKC1
HNF1A-AS1ENSG00000241388.3139.6814062.601501.157804.661903.90330HepG2EIF2S1
HNF1A-AS1ENSG00000241388.3145.1996069.159501.069904.288803.49730HepG2EIF4A3
HNF1A-AS1ENSG00000241388.3127.9413071.495500.839502.544701.49730HepG2ESF1
HNF1A-AS1ENSG00000241388.314.6811083.36680-2.505508.426007.16420HepG2FIP1L1
HNF1A-AS1ENSG00000241388.3117.3360053.488401.133202.623501.63550HepG2FTO
HNF1A-AS1ENSG00000241388.3207.9889060.521001.780906.388005.44260HepG2GPKOW
HNF1A-AS1ENSG00000241388.3116.8184023.673002.3029010.986909.83080HepG2HNRNPA1
HNF1A-AS1ENSG00000241388.3164.1045026.333602.6395016.9553015.38260HepG2HNRNPC
HNF1A-AS1ENSG00000241388.399.1426027.287701.861208.221307.06800HepG2HNRNPF
HNF1A-AS1ENSG00000241388.315.8494065.65640-2.050504.622303.73890HepG2HNRNPK
HNF1A-AS1ENSG00000241388.373.6144039.910200.883102.074701.47990HepG2HNRNPL
HNF1A-AS1ENSG00000241388.3247.6898057.756702.1004017.8912016.49330HepG2HNRNPLL
HNF1A-AS1ENSG00000241388.378.4499026.159301.584305.651504.81030HepG2HNRNPU
HNF1A-AS1ENSG00000241388.391.7534026.869401.771706.011204.98440HepG2IGF2BP1
HNF1A-AS1ENSG00000241388.362.7985026.720601.232703.509102.69180HepG2ILF2
HNF1A-AS1ENSG00000241388.3188.3583090.566001.056303.437002.03960HepG2KRR1
HNF1A-AS1ENSG00000241388.3192.3847058.914301.707208.613306.87890HepG2MTPAP
HNF1A-AS1ENSG00000241388.3186.2571051.215701.8625011.9460010.49410HepG2NSUN2
HNF1A-AS1ENSG00000241388.36.5102032.94190-2.339203.914102.84460HepG2PABPC1
HNF1A-AS1ENSG00000241388.396.7755049.332100.972003.401902.73680HepG2PUS1
HNF1A-AS1ENSG00000241388.3103.5074053.507500.951803.098402.44450HepG2QKI
HNF1A-AS1ENSG00000241388.35.4361048.20210-3.148405.307104.34750HepG2RAVER1
HNF1A-AS1ENSG00000241388.380.8001022.976701.814103.388601.36450HepG2RBM17
HNF1A-AS1ENSG00000241388.320.3396065.54290-1.688204.664704.03720HepG2RBM22
HNF1A-AS1ENSG00000241388.385.9784029.413101.547404.687803.82960HepG2RPLP0
HNF1A-AS1ENSG00000241388.393.2169036.175901.365504.413303.40240HepG2RPS3A
HNF1A-AS1ENSG00000241388.375.8563026.571101.513304.412303.23600HepG2SERBP1
HNF1A-AS1ENSG00000241388.378.2581022.212201.816803.188501.70230HepG2SF1
HNF1A-AS1ENSG00000241388.340.7861097.85740-1.262602.289501.67520HepG2SF3A3
HNF1A-AS1ENSG00000241388.377.9531039.735900.972102.546501.87000HepG2SLBP
HNF1A-AS1ENSG00000241388.38.8917074.02770-3.0575011.6086010.77270HepG2SRFBP1
HNF1A-AS1ENSG00000241388.3107.1944026.813301.999109.754008.58400HepG2SRSF7
HNF1A-AS1ENSG00000241388.311.3196043.68940-1.948504.348903.68620HepG2SRSF9
HNF1A-AS1ENSG00000241388.316.8860046.54960-1.462903.316302.64790HepG2SUCLG1
HNF1A-AS1ENSG00000241388.3144.3509056.307001.358106.397605.35480HepG2TARDBP
HNF1A-AS1ENSG00000241388.382.4568044.346600.894702.698801.87210HepG2TIA1
HNF1A-AS1ENSG00000241388.393.1461052.817700.818402.474301.83400HepG2ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for HNF1A-AS1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of HNF1A-AS1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for HNF1A-AS1 is not avaliable on ENCORE database.