DALRD3

General Information

Gene Name       : DALRD3
Gene ID             : ENSG00000178149.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: DALRD3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878DALRD3ENSG00000178149.168.7210.709.71ENCSR000AEF
HepG2DALRD3ENSG00000178149.1616.0814.7815.43ENCSR985KAT
K562DALRD3ENSG00000178149.1611.489.6710.57ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for DALRD3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • DALRD3 RNA is bound by 5 proteins.  







eCLIP assay for DALRD3 is not avaliable on ENCORE database.





5 proteins are bound to DALRD3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr34905546849055499-3'-UTR,CDS,intron-Distal,intron-Proximal4.561066.75316K562YBX3
chr34905545449055468-3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal4.466836.30966K562YBX3
chr34905529149055302-3'-UTR,5'-UTR,CDS,intron-Distal3.140383.87559K562YBX3
chr34905842749058467-5'-UTR,intron-Distal6.5992827.99554HepG2DGCR8
chr34905850749058618-5'-UTR,intron-Distal,intron-Proximal4.9387423.03045HepG2DROSHA
chr34905824949058282-5'-UTR,intron-Distal5.278779.33094HepG2DROSHA
chr34905853249058584-5'-UTR,intron-Distal,intron-Proximal6.1358421.24413K562DROSHA
chr34905863349058672-5'-UTR,intron-Distal6.8299815.57081K562DGCR8
chr34905854049058613-5'-UTR,intron-Distal,intron-Proximal7.2597440.47942HepG2DGCR8
chr34905589349055957-5'-UTR,CDS,intron-Distal5.733077.16906K562DGCR8
chr34905844349058452-5'-UTR,intron-Distal6.3940410.58144K562DGCR8
chr34905593849056022-5'-UTR,CDS,intron-Distal,intron-Proximal5.244646.92775K562DROSHA
chr34905865149058670-5'-UTR,intron-Distal5.9592913.93835HepG2DGCR8
chr34905595749056029-5'-UTR,CDS,intron-Distal,intron-Proximal5.4922411.44248K562DGCR8
chr34905837649058474-5'-UTR,intron-Distal6.6499723.81687HepG2DROSHA
chr34905592049056030-5'-UTR,CDS,intron-Distal,intron-Proximal5.8575213.11190HepG2DGCR8
chr34905813049058253-intron-Distal7.2726832.55955K562DROSHA
chr34905733149057430-intron-Distal7.3079063.86625K562DGCR8
chr34905611849056180-intron-Distal4.855097.33095HepG2DGCR8
chr34905620949056262-intron-Distal4.840325.51133HepG2DGCR8
chr34905776349057787-intron-Distal7.0393822.15066K562DGCR8
chr34905809049058118-intron-Distal7.8920768.57962HepG2DGCR8
chr34905790449057952-intron-Distal7.9700241.26602K562DGCR8
chr34905765649057709-intron-Distal6.8952238.58056K562DGCR8
chr34905805149058085-intron-Distal6.9402114.31890K562DROSHA
chr34905779149057904-intron-Distal9.10996100.18955K562DGCR8
chr34905759549057598-intron-Distal5.6328014.21251HepG2DGCR8
chr34905790349057952-intron-Distal6.5191241.79483HepG2DGCR8
chr34905774049057784-intron-Distal6.510538.47410K562DROSHA
chr34905801949058037-intron-Distal4.951106.55621HepG2DROSHA
chr34905729249057315-intron-Distal6.5885615.95649K562DGCR8
chr34905696249056985-intron-Distal3.791365.99272HepG2DROSHA
chr34905721049057226-intron-Distal5.009348.84364HepG2DROSHA
chr34905773649057793-intron-Distal6.7688734.24960HepG2DROSHA
chr34905726049057317-intron-Distal6.4058526.18316HepG2DROSHA
chr34905760349057622-intron-Distal5.0601015.77294HepG2DGCR8
chr34905780549057941-intron-Distal3.788544.95618K562SAFB2
chr34905737649057436-intron-Distal6.9942132.07916HepG2DROSHA
chr34905773649057763-intron-Distal6.4998328.15704K562DGCR8
chr34905621049056301-intron-Distal5.982059.05894K562DGCR8
chr34905767749057721-intron-Distal7.0371220.22593K562DROSHA
chr34905638049056432-intron-Distal4.560487.03732K562DGCR8
chr34905878049058808-intron-Distal,intron-Proximal6.8205418.66157K562DGCR8
chr34905731849057443-intron-Distal3.241185.36220K562SAFB2
chr34905814049058245-intron-Distal7.81717112.50940HepG2DGCR8
chr34905785749057943-intron-Distal7.5892446.01026HepG2DROSHA
chr34905765549057704-intron-Distal6.6997331.34875HepG2DROSHA
chr34905780349057837-intron-Distal6.4065847.01031HepG2DGCR8
chr34905825749058268-intron-Distal5.7887713.11190HepG2DGCR8
chr34905780449057906-intron-Distal7.7049242.70250K562DROSHA
chr34905806249058090-intron-Distal8.58930108.26061HepG2DGCR8
chr34905809549058128-intron-Distal9.3656689.17019K562DGCR8
chr34905870649058717-intron-Distal,intron-Proximal5.5964111.15844HepG2DGCR8
chr34905806449058092-intron-Distal9.97319151.01130K562DGCR8
chr34905795249057991-intron-Distal5.0119216.91180HepG2DGCR8
chr34905795549057994-intron-Distal7.3395424.87100K562DGCR8
chr34905803749058057-intron-Distal4.704975.41565HepG2DROSHA
chr34905813749058274-intron-Distal8.2118387.71781K562DGCR8
chr34905812849058249-intron-Distal7.7582948.13353HepG2DROSHA
chr34905759149057629-intron-Distal7.2007625.64911K562DGCR8
chr34905733749057432-intron-Distal5.5310533.55654HepG2DGCR8
chr34905878549058803-intron-Distal5.8901713.38807HepG2DGCR8
chr34905766049057698-intron-Distal5.7445320.11818HepG2DGCR8
chr34905811849058127-intron-Distal6.4642324.65588HepG2DGCR8
chr34905775149057773-intron-Distal6.3694416.38639HepG2DGCR8
chr34905877649058890-intron-Distal,intron-Proximal4.193013.36385K562UCHL5
chr34905731749057376-intron-Distal7.2573142.94238HepG2DROSHA
chr34905783749057903-intron-Distal7.5157496.38428HepG2DGCR8
chr34905813449058195-intron-Distal3.961473.54264K562SAFB2
chr34905732549057454-intron-Distal8.7618262.06380K562DROSHA
chr34905779349057857-intron-Distal6.6015254.51709HepG2DROSHA
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for DALRD3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for DALRD3 is not available on ENCORE database.

  • 33 RBPs can affect the levels of DALRD3.  








The Knockdown/knockout RNA-Seq assay for DALRD3 is not available on ENCORE database.





33 RBPs can affect the gene expression of DALRD3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
DALRD3ENSG00000178149.12299.87450200.329700.581902.369101.79970HepG2ACO1
DALRD3ENSG00000178149.12453.39220238.383800.927405.809905.07140HepG2AKAP1
DALRD3ENSG00000178149.1262.40980108.99910-0.804502.440801.71310HepG2CALR
DALRD3ENSG00000178149.12311.19020196.201500.665403.110802.45920HepG2DDX6
DALRD3ENSG00000178149.12112.95860208.33800-0.883104.214003.42950HepG2EIF4A3
DALRD3ENSG00000178149.12209.83770284.74830-0.440402.039401.30190HepG2EIF4G1
DALRD3ENSG00000178149.12296.37040458.10250-0.628305.510604.71140HepG2ETF1
DALRD3ENSG00000178149.12322.32990210.298100.616003.143502.40660HepG2FXR1
DALRD3ENSG00000178149.12290.62080195.033000.575302.675202.02050HepG2G3BP1
DALRD3ENSG00000178149.1279.32840137.09670-0.789302.626201.99450HepG2HNRNPA1
DALRD3ENSG00000178149.12157.79070221.59550-0.489902.173501.53270HepG2HNRNPF
DALRD3ENSG00000178149.12177.11880110.186200.684702.479301.57600HepG2HNRNPM
DALRD3ENSG00000178149.12151.72990213.28330-0.491302.178901.62980HepG2PCBP1
DALRD3ENSG00000178149.12370.84270289.793700.355701.864201.30820HepG2PUM2
DALRD3ENSG00000178149.12142.92260235.03500-0.717603.766403.05430HepG2QKI
DALRD3ENSG00000178149.12287.00830382.88660-0.415802.401301.90890HepG2RBM22
DALRD3ENSG00000178149.1296.35460213.31480-1.146607.228606.18100HepG2RBM25
DALRD3ENSG00000178149.12383.52780241.528400.667004.987004.29690HepG2NELFE
DALRD3ENSG00000178149.12286.57050432.45220-0.593705.231804.60320HepG2SRFBP1
DALRD3ENSG00000178149.12269.54510191.874400.490302.832702.27600HepG2SRSF9
DALRD3ENSG00000178149.12218.57650375.46380-0.780507.396506.63600HepG2SSB
DALRD3ENSG00000178149.1284.62180136.63680-0.691201.923201.38850HepG2U2AF1
DALRD3ENSG00000178149.12165.81280117.909000.491801.839401.32900HepG2UTP3
DALRD3ENSG00000178149.12286.03930167.216300.774405.387904.63790K562AGGF1
DALRD3ENSG00000178149.12261.07420183.745900.506602.468701.54850K562AKAP8
DALRD3ENSG00000178149.12272.45210173.996200.646803.551102.80730K562AKAP8L
DALRD3ENSG00000178149.12258.62210182.564200.502302.658101.76310K562ATP5C1
DALRD3ENSG00000178149.12260.11580179.554300.534602.809602.08580K562EIF2S2
DALRD3ENSG00000178149.1265.83890124.96300-0.924503.214602.44360K562G3BP2
DALRD3ENSG00000178149.12178.9742092.744400.948302.875401.86030K562PABPN1
DALRD3ENSG00000178149.12210.29640110.269700.931302.901401.40310K562PPP1R8
DALRD3ENSG00000178149.12224.20300103.412401.116304.095902.38400K562SFPQ
DALRD3ENSG00000178149.1273.61110125.00110-0.763902.873702.05530K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for DALRD3 is not available on ENCORE database.





19 RBPs can affect the splicing of DALRD3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEDALRD3ENSG00000178149.12chr3-490540444905410649053861490539444905420649054280-0.371000.003410.09211excludedK562PRPF8
SEDALRD3ENSG00000178149.12chr3-490540444905410649053861490539444905420649054280-0.355000.000000.00000excludedK562AQR
SEDALRD3ENSG00000178149.12chr3-490540444905410649053861490539444905420649054280-0.230000.001760.06068excludedK562FXR1
A3SSDALRD3ENSG00000178149.12chr3-4905420649054390490542064905428049054660490549460.102000.000000.00003longerK562AQR
RIDALRD3ENSG00000178149.12chr3-490532364905377349053236490533054905340549053773-0.545000.000760.04154excludedHepG2SFPQ
RIDALRD3ENSG00000178149.12chr3-4905466049054946490546604905478949054866490549460.319000.004210.05472includedK562SF3B4
RIDALRD3ENSG00000178149.12chr3-4905340549053773490534054905351949053590490537730.261000.007570.08742includedK562SF3B4
RIDALRD3ENSG00000178149.12chr3-4905340549053773490534054905351949053590490537730.136000.001420.07081includedK562DROSHA
RIDALRD3ENSG00000178149.12chr3-4905323649053773490532364905330549053405490537730.296000.004210.06648includedHepG2PCBP2
RIDALRD3ENSG00000178149.12chr3-4905340549053773490534054905351949053590490537730.288000.000030.00108includedHepG2PCBP2
RIDALRD3ENSG00000178149.12chr3-4905323649053773490532364905330549053405490537730.295000.008410.07552includedHepG2SF3A3
RIDALRD3ENSG00000178149.12chr3-4905340549053773490534054905351949053590490537730.266000.004650.04785includedHepG2SF3A3
RIDALRD3ENSG00000178149.12chr3-4905323649053773490532364905330549053405490537730.385000.003670.06830includedK562HNRNPC
RIDALRD3ENSG00000178149.12chr3-4905340549053773490534054905351949053590490537730.261000.000740.02917includedHepG2TIA1
RIDALRD3ENSG00000178149.12chr3-4905323649053773490532364905330549053405490537730.261000.001770.02373includedHepG2PRPF8
RIDALRD3ENSG00000178149.12chr3-4905340549053773490534054905351949053590490537730.361000.003540.04109includedHepG2PRPF8
RIDALRD3ENSG00000178149.12chr3-4905323649053773490532364905330549053405490537730.319000.001660.02183includedK562PRPF8
RIDALRD3ENSG00000178149.12chr3-4905340549053773490534054905351949053590490537730.416000.002410.02976includedK562PRPF8
RIDALRD3ENSG00000178149.12chr3-4905340549053773490534054905351949053590490537730.207000.003650.04318includedHepG2PCBP1
RIDALRD3ENSG00000178149.12chr3-4905323649053773490532364905330549053405490537730.302000.007320.06248includedHepG2U2AF1
RIDALRD3ENSG00000178149.12chr3-4905340549053773490534054905349349053590490537730.317000.003120.05523includedHepG2KHSRP
RIDALRD3ENSG00000178149.12chr3-4905340549053773490534054905351949053590490537730.135000.004980.04466includedHepG2RBM22
RIDALRD3ENSG00000178149.12chr3-490532364905377349053236490533054905340549053773-0.220000.000070.00244excludedHepG2SRSF9
RIDALRD3ENSG00000178149.12chr3-4905323649053773490532364905330549053405490537730.344000.000840.01082includedK562EFTUD2
RIDALRD3ENSG00000178149.12chr3-490532364905377349053236490533054905340549053773-0.463000.000530.05526excludedK562METAP2
RIDALRD3ENSG00000178149.12chr3-4905323649053773490532364905330549053405490537730.309000.006490.03645includedK562AQR
RIDALRD3ENSG00000178149.12chr3-4905340549053773490534054905351949053590490537730.373000.000300.00223includedK562AQR
RIDALRD3ENSG00000178149.12chr3-4905340549053773490534054905351949053590490537730.356000.000340.01680includedK562TARDBP
RIDALRD3ENSG00000178149.12chr3-4905340549053773490534054905351949053590490537730.329000.000090.00326includedK562PTBP1
RIDALRD3ENSG00000178149.12chr3-4905466049054946490546604905478949054866490549460.353000.000150.00393includedK562FXR1
RIDALRD3ENSG00000178149.12chr3-4905340549053773490534054905351949053590490537730.430000.001570.02645includedK562FXR1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for DALRD3 is not avaliable on ENCORE database.