BAG1

General Information

Gene Name       : BAG1
Gene ID             : ENSG00000107262.21
Essential Gene : No

Functions

Localization

Domains (AlphaFold: BAG1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878BAG1ENSG00000107262.2138.3744.6741.52ENCSR000AEF
HepG2BAG1ENSG00000107262.2127.4231.3629.39ENCSR985KAT
K562BAG1ENSG00000107262.2143.3838.3040.84ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for BAG1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • BAG1 RNA is bound by 11 proteins.  







eCLIP assay for BAG1 is not avaliable on ENCORE database.





11 proteins are bound to BAG1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr93325524933255318-3'-UTR,CDS,intron-Distal3.749645.78807K562BUD13
chr93325685433256905-3'-UTR,CDS,intron-Distal,intron-Proximal4.347074.07072K562UCHL5
chr93325679833256871-3'-UTR,CDS,intron-Distal,intron-Proximal3.302113.31745K562ZNF622
chr93325685533256956-3'-UTR,CDS,intron-Distal,intron-Proximal4.699469.56916K562SF3B4
chr93325891633259033-3'-UTR,CDS,intron-Distal,intron-Proximal3.196137.93618K562UCHL5
chr93325892133259001-3'-UTR,CDS,intron-Distal3.463117.13168HepG2BCLAF1
chr93325525733255364-3'-UTR,CDS,intron-Distal3.7472710.38328K562SF3B4
chr93325679833256847-3'-UTR,CDS,intron-Distal,intron-Proximal3.991343.06595HepG2BCLAF1
chr93325680733256905-3'-UTR,CDS,intron-Distal,intron-Proximal3.690134.14074K562UPF1
chr93326460233264674-5'-UTR,CDS,intron-Distal,intron-Proximal6.190238.23278HepG2DDX3X
chr93326426533264425-5'-UTR,CDS,intron-Distal3.7613011.14477K562ZNF622
chr93326433633264442-5'-UTR,CDS,intron-Distal4.625565.59408HepG2GRWD1
chr93326425133264438-5'-UTR,CDS,intron-Distal3.5837512.36038K562ZNF800
chr93326451033264621-5'-UTR,CDS,intron-Distal,intron-Proximal4.026863.79347HepG2GRWD1
chr93326422033264429-5'-UTR,CDS,intron-Distal3.539694.27354HepG2UPF1
chr93326105633261118-CDS,intron-Distal,intron-Proximal3.492354.17944K562BUD13
chr93326106833261166-CDS,intron-Distal,intron-Proximal4.913306.23323K562UCHL5
chr93326270933262835-CDS,intron-Distal,intron-Proximal4.310034.23295HepG2GRWD1
chr93326274333262767-CDS,intron-Distal4.138084.51688K562YBX3
chr93326276733262782-CDS,intron-Distal3.434015.15749K562YBX3
chr93326205833262105-CDS,intron-Distal,intron-Proximal5.082406.04760K562AQR
chr93326417433264230-CDS,intron-Distal5.060865.69951K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for BAG1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for BAG1 is not available on ENCORE database.

  • 71 RBPs can affect the levels of BAG1.  








The Knockdown/knockout RNA-Seq assay for BAG1 is not available on ENCORE database.





71 RBPs can affect the gene expression of BAG1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
BAG1ENSG00000107262.12344.38230809.60950-1.2332014.0524012.95000HepG2AKAP1
BAG1ENSG00000107262.12349.29160506.49170-0.536102.736101.76650HepG2CCAR1
BAG1ENSG00000107262.12585.55570714.55420-0.287202.477801.77100HepG2DAZAP1
BAG1ENSG00000107262.12296.87460416.18710-0.487402.909602.21580HepG2DDX21
BAG1ENSG00000107262.12487.25040666.28680-0.451502.472601.88650HepG2DDX6
BAG1ENSG00000107262.12601.17610461.518200.381302.002701.41180HepG2DKC1
BAG1ENSG00000107262.12220.20530283.83480-0.366201.958901.39230HepG2DNAJC2
BAG1ENSG00000107262.12300.15410640.39600-1.0933011.6611010.49570HepG2EIF2S1
BAG1ENSG00000107262.12464.90390689.11280-0.567803.122502.39440HepG2EIF4B
BAG1ENSG00000107262.121029.73310704.943300.546607.540906.28330HepG2EIF4G1
BAG1ENSG00000107262.12443.92870675.29200-0.605205.066703.98390HepG2EIF4G2
BAG1ENSG00000107262.121137.33360846.188200.426505.116604.34460HepG2ETF1
BAG1ENSG00000107262.12541.89610714.17140-0.398302.343801.70510HepG2FXR1
BAG1ENSG00000107262.12408.51180662.40490-0.697305.535104.60750HepG2G3BP1
BAG1ENSG00000107262.12416.24540670.96380-0.688805.941204.94800HepG2HNRNPK
BAG1ENSG00000107262.12498.72280350.644000.508102.966402.31790HepG2HNRNPLL
BAG1ENSG00000107262.12945.52640714.421500.404202.607301.96990HepG2MAGOH
BAG1ENSG00000107262.12572.01090735.28960-0.362301.922901.38970HepG2NCBP2
BAG1ENSG00000107262.12567.15080708.55000-0.321102.339601.63890HepG2NOL12
BAG1ENSG00000107262.12535.02120726.59890-0.441603.965803.33720HepG2PTBP1
BAG1ENSG00000107262.12582.15280717.47120-0.301501.992301.41730HepG2PUM2
BAG1ENSG00000107262.12436.40630786.88850-0.8505011.8159010.65800HepG2QKI
BAG1ENSG00000107262.12561.68730707.27230-0.332502.049501.58570HepG2RBM22
BAG1ENSG00000107262.12415.70790714.16550-0.780708.873007.71730HepG2RBM25
BAG1ENSG00000107262.12663.42860808.62080-0.285502.140601.65270HepG2NELFE
BAG1ENSG00000107262.12615.60900753.14580-0.290902.171101.61620HepG2RECQL
BAG1ENSG00000107262.12187.19230279.90340-0.580402.741901.80750HepG2SERBP1
BAG1ENSG00000107262.121246.87620546.555501.1898012.9636011.44100HepG2SF3A3
BAG1ENSG00000107262.12580.15680756.45290-0.382803.330002.68880HepG2SF3B4
BAG1ENSG00000107262.12435.29150642.38050-0.561406.524105.74020HepG2SRSF9
BAG1ENSG00000107262.12991.01380693.652300.514606.872106.13320HepG2SSB
BAG1ENSG00000107262.12501.95130709.74450-0.499804.997204.28020HepG2TAF15
BAG1ENSG00000107262.12542.08860310.446000.804108.559507.76810HepG2TIAL1
BAG1ENSG00000107262.12628.00240382.498900.715205.854004.95650HepG2U2AF1
BAG1ENSG00000107262.12327.61110484.71000-0.565105.266704.35200HepG2UPF1
BAG1ENSG00000107262.12972.46140524.346900.8910017.1140015.82580K562AGGF1
BAG1ENSG00000107262.12812.30660576.154100.495504.184802.92140K562AKAP8
BAG1ENSG00000107262.12970.42860545.600800.830709.274707.99790K562AKAP8L
BAG1ENSG00000107262.122061.725001340.847000.620607.733106.83360K562AQR
BAG1ENSG00000107262.12846.99050572.455500.565106.730105.22160K562ATP5C1
BAG1ENSG00000107262.12356.89000608.38400-0.769506.645105.27620K562BOP1
BAG1ENSG00000107262.12454.67960646.85410-0.508604.053403.10420K562CPSF6
BAG1ENSG00000107262.12688.07290924.62900-0.426304.343102.80490K562DDX21
BAG1ENSG00000107262.12524.45900766.08110-0.546706.947004.85380K562DDX27
BAG1ENSG00000107262.12784.11540542.693800.530805.189803.70060K562DDX3X
BAG1ENSG00000107262.121219.311901042.533200.225902.058301.48230K562DDX47
BAG1ENSG00000107262.12785.314001210.64310-0.6244010.206708.95940K562EIF2S2
BAG1ENSG00000107262.12755.74100542.472900.478204.572703.56100K562EIF3G
BAG1ENSG00000107262.121027.23560566.983500.8573012.0538010.29950K562EIF4A3
BAG1ENSG00000107262.12988.334001547.66050-0.6470011.120309.29260K562EIF4G2
BAG1ENSG00000107262.12380.09510557.92990-0.553703.756402.67600K562FTO
BAG1ENSG00000107262.12970.00850589.639400.7181011.3782010.23800K562FXR1
BAG1ENSG00000107262.12983.06420712.443100.464403.376301.78400K562GEMIN5
BAG1ENSG00000107262.12447.90500617.56040-0.463403.208602.35580K562GPKOW
BAG1ENSG00000107262.121953.549301613.318600.276002.283801.59410K562GRSF1
BAG1ENSG00000107262.12818.313401073.93310-0.392203.593102.36430K562HNRNPA1
BAG1ENSG00000107262.12786.59260576.533300.448103.590502.92220K562HNRNPC
BAG1ENSG00000107262.12439.69870589.04890-0.421902.468501.30840K562HNRNPK
BAG1ENSG00000107262.12840.63910579.039400.537705.056103.87680K562KIF1C
BAG1ENSG00000107262.12372.27980527.38800-0.502502.509201.62320K562KRR1
BAG1ENSG00000107262.121244.72600619.835701.0058013.0122011.08570K562MAGOH
BAG1ENSG00000107262.12804.40050618.579000.378903.033402.06410K562MATR3
BAG1ENSG00000107262.12842.06780454.667200.889007.549605.81440K562NAA15
BAG1ENSG00000107262.12524.30390736.89140-0.491003.269402.36470K562PCBP3
BAG1ENSG00000107262.12417.66920565.22400-0.436503.057302.21370K562POLR2G
BAG1ENSG00000107262.121206.82970925.509900.382803.017702.15670K562PPIG
BAG1ENSG00000107262.12977.71710602.208800.699109.471808.29440K562PTBP1
BAG1ENSG00000107262.121457.452001759.88520-0.272002.342101.45730K562PUM2
BAG1ENSG00000107262.121384.60640541.128301.3553013.2680012.12460K562PUS1
BAG1ENSG00000107262.12920.81940527.213200.8044012.2725011.02710K562RBM15
BAG1ENSG00000107262.12319.06170471.62080-0.563803.888202.71080K562RCC2
BAG1ENSG00000107262.12421.93750587.41700-0.477402.712101.74770K562SF3B1
BAG1ENSG00000107262.12786.27480590.364900.413303.349202.57640K562SRSF1
BAG1ENSG00000107262.12755.77000566.930000.414703.490702.56900K562SYNCRIP
BAG1ENSG00000107262.12618.31740453.782000.446202.565901.51890K562U2AF1
BAG1ENSG00000107262.121021.55910548.605300.896804.552302.74140K562UTP18
BAG1ENSG00000107262.12650.83630857.97460-0.398603.209202.27120K562WDR3
BAG1ENSG00000107262.12619.91480892.25960-0.525407.430106.10700K562WDR43
BAG1ENSG00000107262.121181.44810550.190601.102507.814704.81320K562XRCC6
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for BAG1 is not available on ENCORE database.





7 RBPs can affect the splicing of BAG1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEBAG1ENSG00000107262.12chr9-332621023326224433261084332611673326269933262828-0.068000.001420.02773excludedK562SRSF1
SEBAG1ENSG00000107262.12chr9-3326210233262244332610843326116733262699332628280.233000.000000.00000includedK562SF3B4
SEBAG1ENSG00000107262.12chr9-3326210233262244332610843326116733262699332628280.210000.000000.00032includedK562WDR43
SEBAG1ENSG00000107262.12chr9-3326210233262244332610843326116733262699332628280.119000.000010.00048includedHepG2HNRNPK
SEBAG1ENSG00000107262.12chr9-332621023326224433261084332611673326269933262828-0.116000.000120.00282excludedK562PUS1
SEBAG1ENSG00000107262.12chr9-3326210233262244332610843326116733262699332628280.155000.000540.07828includedHepG2RBM15
SEBAG1ENSG00000107262.12chr9-332621023326224433261084332611673326269933262828-0.053000.000070.00292excludedHepG2SRSF1
SEBAG1ENSG00000107262.12chr9-3326210233262233332610843326116733262699332628280.055000.002120.08098includedHepG2SF3B4
SEBAG1ENSG00000107262.12chr9-332621023326224433261084332611673326269933262828-0.112000.001280.03294excludedK562RBM15
SEBAG1ENSG00000107262.12chr9-3326210233262244332610843326116733262699332628280.115000.000990.04463includedK562HNRNPK
SEBAG1ENSG00000107262.12chr9-3326210233262244332610843326116733262699332628280.139000.000140.00356includedK562HNRNPC

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for BAG1 is not avaliable on ENCORE database.