ATG7

General Information

Gene Name       : ATG7
Gene ID             : ENSG00000197548.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ATG7)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ATG7ENSG00000197548.1229.3228.1328.73ENCSR000AEF
HepG2ATG7ENSG00000197548.129.0012.3910.70ENCSR985KAT
K562ATG7ENSG00000197548.1226.5930.4728.53ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ATG7 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ATG7 RNA is bound by 15 proteins.  







eCLIP assay for ATG7 is not avaliable on ENCORE database.





15 proteins are bound to ATG7 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr31135681611356888+3'-UTR,CDS,intron-Distal,intron-Proximal4.378234.96063K562LIN28B
chr31138211811382210+3'-UTR,CDS,intron-Proximal3.358294.99842HepG2PPIG
chr31138949111389548+3'-UTR,CDS,intron-Proximal4.325025.46313K562KHSRP
chr31138212311382209+3'-UTR,CDS4.220583.01428K562UCHL5
chr31139989511400085+3'-UTR,CDS3.057413.40321HepG2GRWD1
chr31135051011350606+3'-UTR,CDS,intron-Proximal5.302234.35676HepG2PRPF8
chr31140002111400085+3'-UTR,CDS3.742723.59112HepG2PPIG
chr31135052511350635+3'-UTR,CDS,intron-Proximal4.328197.44508K562PRPF8
chr31138211411382210+3'-UTR,CDS,intron-Proximal3.872824.09885HepG2BCLAF1
chr31134082111340889+CDS,intron-Proximal4.341504.67744K562BUD13
chr31140430611404407+CDS,intron-Proximal4.437704.97342HepG2PPIG
chr31134839111348471+CDS,intron-Distal,intron-Proximal3.372203.75245K562BUD13
chr31136027011360341+intron-Distal3.991284.22415K562PTBP1
chr31149346711493589+intron-Distal5.256487.88608K562AGGF1
chr31149345111493592+intron-Distal4.550166.76480K562HNRNPL
chr31137291311373012+intron-Distal,intron-Proximal3.874363.45805K562KHSRP
chr31136037211360442+intron-Distal4.154866.11515K562PTBP1
chr31149350511493604+intron-Distal4.152383.85148K562GTF2F1
chr31150656811506627+intron-Distal5.029669.06027K562TARDBP
chr31138953911389717+intron-Distal,intron-Proximal4.5549510.39215K562PRPF8
chr31152051511520565+intron-Distal4.210606.16837K562AGGF1
chr31136020711360327+intron-Distal4.107483.62025K562MATR3
chr31135793811358001+intron-Distal4.001244.31512K562KHSRP
chr31134902011349111+intron-Distal4.685564.40618K562PTBP1
chr31149330911493372+intron-Distal3.513583.56605HepG2HNRNPL
chr31135801311358154+intron-Distal6.4638920.39116K562CPSF6
chr31152050011520582+intron-Distal4.328674.50052K562HNRNPL
chr31141893611419004+intron-Distal4.478053.91475K562PTBP1
chr31138954811389607+intron-Proximal4.730956.58261K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ATG7 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ATG7 is not available on ENCORE database.

  • 43 RBPs can affect the levels of ATG7.  








The Knockdown/knockout RNA-Seq assay for ATG7 is not available on ENCORE database.





43 RBPs can affect the gene expression of ATG7 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ATG7ENSG00000197548.8304.23290197.035000.626604.513503.77350HepG2ACO1
ATG7ENSG00000197548.8776.06390335.345201.2104013.0939012.02400HepG2AKAP1
ATG7ENSG00000197548.8220.26850146.213500.591102.529801.95430HepG2BOP1
ATG7ENSG00000197548.8418.93150263.617300.668204.274803.32700HepG2CIRBP
ATG7ENSG00000197548.8204.01510293.33990-0.523903.178702.49940HepG2CELF1
ATG7ENSG00000197548.8220.00880315.46460-0.519903.641702.81070HepG2DAZAP1
ATG7ENSG00000197548.8244.16630182.241000.421902.223301.46940HepG2DDX19B
ATG7ENSG00000197548.8292.91180189.525900.628002.410801.68370HepG2DDX55
ATG7ENSG00000197548.8272.71270188.515800.532602.879002.18880HepG2DKC1
ATG7ENSG00000197548.8137.78830212.07690-0.622102.185601.64010HepG2HNRNPU
ATG7ENSG00000197548.8204.03160297.54150-0.544302.267601.69240HepG2MATR3
ATG7ENSG00000197548.8247.06000329.63690-0.416002.032901.55120HepG2PTBP1
ATG7ENSG00000197548.8134.72360214.58630-0.671602.017801.40640HepG2RAVER1
ATG7ENSG00000197548.8414.83670327.504600.340901.806601.36470HepG2RBM22
ATG7ENSG00000197548.8181.09630324.01600-0.839306.149305.17990HepG2RBM25
ATG7ENSG00000197548.8225.86620343.21220-0.603604.173503.47100HepG2SF3B4
ATG7ENSG00000197548.8580.57000369.898100.650207.164106.46130HepG2SRFBP1
ATG7ENSG00000197548.8209.70080358.23210-0.772606.214405.57550HepG2SRSF1
ATG7ENSG00000197548.8176.48340244.00610-0.467402.412101.75930HepG2SRSF7
ATG7ENSG00000197548.8403.63830321.148300.329701.870501.42730HepG2SSB
ATG7ENSG00000197548.8221.40130321.97300-0.540303.272802.67010HepG2TAF15
ATG7ENSG00000197548.8208.25170295.87050-0.506602.826501.98200HepG2TIA1
ATG7ENSG00000197548.8293.35620206.671000.505203.200602.62600HepG2ZNF622
ATG7ENSG00000197548.8394.78680519.28620-0.395502.477601.85900K562AKAP8L
ATG7ENSG00000197548.8410.72170544.83000-0.407603.256402.25990K562ATP5C1
ATG7ENSG00000197548.8300.88070208.589700.528402.417301.60780K562BOP1
ATG7ENSG00000197548.8146.72990223.88920-0.609602.825901.75730K562CCAR1
ATG7ENSG00000197548.8841.262501042.28970-0.309102.447501.53160K562CELF1
ATG7ENSG00000197548.8317.19410427.93890-0.432003.050801.65530K562DDX27
ATG7ENSG00000197548.8403.82950510.09440-0.337002.352001.74400K562DDX47
ATG7ENSG00000197548.8753.86470517.372900.543005.931104.93750K562EIF2S2
ATG7ENSG00000197548.8302.39030458.36920-0.600103.497402.32210K562EIF3D
ATG7ENSG00000197548.8543.79540689.36830-0.342202.095401.43150K562GRSF1
ATG7ENSG00000197548.8349.14920628.21860-0.8474011.120609.36130K562HNRNPU
ATG7ENSG00000197548.8400.12130551.14120-0.462003.030002.16320K562KIF1C
ATG7ENSG00000197548.8425.81690578.70930-0.442603.247302.32940K562MAGOH
ATG7ENSG00000197548.8362.71600577.50870-0.671006.597805.08800K562MATR3
ATG7ENSG00000197548.8445.37970617.41060-0.471203.590502.53420K562MBNL1
ATG7ENSG00000197548.8323.97590435.53300-0.426902.914802.08420K562MTPAP
ATG7ENSG00000197548.8473.22700354.653700.416002.381601.62240K562PPIG
ATG7ENSG00000197548.8409.84620562.26540-0.456203.485602.75080K562PTBP1
ATG7ENSG00000197548.8707.68520924.82230-0.386102.561701.77720K562PUF60
ATG7ENSG00000197548.8328.47820501.79410-0.611305.058404.27860K562RBM15
ATG7ENSG00000197548.8288.61910424.35740-0.556102.975402.12800K562RPS19
ATG7ENSG00000197548.8254.36640396.50880-0.640404.978903.81750K562SF3B4
ATG7ENSG00000197548.8391.87070489.20990-0.320102.136001.30440K562SRPK2
ATG7ENSG00000197548.8380.02130551.22720-0.536604.217403.35210K562SRSF1
ATG7ENSG00000197548.8300.25300414.83510-0.466403.085401.48130K562SRSF9
ATG7ENSG00000197548.8285.26510403.33670-0.499702.540201.57150K562SUPV3L1
ATG7ENSG00000197548.8358.12570456.56040-0.350302.404401.61130K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ATG7 is not available on ENCORE database.





9 RBPs can affect the splicing of ATG7 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEATG7ENSG00000197548.8chr3+1132267911322788113140331131411611340159113403290.178000.000440.01067includedK562SRSF1
SEATG7ENSG00000197548.8chr3+113728131137290211356817113569671138211811382209-0.348000.000670.01510excludedK562SF3B4
SEATG7ENSG00000197548.8chr3+113238781132412411314088113141161134015911340329-0.262000.000050.00338excludedK562PRPF8
SEATG7ENSG00000197548.8chr3+113893501138950911383608113837531139989111400086-0.093000.006140.05508excludedK562AQR
SEATG7ENSG00000197548.8chr3+1134083511340890113401591134032911348416113485340.234000.000130.05754includedK562KHSRP
SEATG7ENSG00000197548.8chr3+113408351134089011340159113403291134841611348534-0.283000.000090.00579excludedK562SF3B1
SEATG7ENSG00000197548.8chr3+1134083511340890113401591134032911348416113485340.193000.003220.09536includedK562PTBP1
A3SSATG7ENSG00000197548.8chr3+1142137211421526114214451142152611406132114062080.077000.013660.06909longerK562AQR
MXEATG7ENSG00000197548.8chr3+11340835113408901134841611348534113401591134032911350457113505350.351000.002190.026771includedHepG2SFPQ
MXEATG7ENSG00000197548.8chr3+11340835113408901134841611348534113401591134032911350457113505350.307000.001420.010901includedHepG2U2AF2
MXEATG7ENSG00000197548.8chr3+1135477711354894113568171135696711350457113505351138211811382209-0.429000.000440.010152includedK562SF3B4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ATG7 is not avaliable on ENCORE database.