ASB6

General Information

Gene Name       : ASB6
Gene ID             : ENSG00000148331.11
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ASB6)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ASB6ENSG00000148331.112.285.653.96ENCSR000AEF
HepG2ASB6ENSG00000148331.118.924.456.69ENCSR985KAT
K562ASB6ENSG00000148331.119.458.599.02ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ASB6 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ASB6 RNA is bound by 4 proteins.  







eCLIP assay for ASB6 is not avaliable on ENCORE database.





4 proteins are bound to ASB6 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr9132399837132399966-3'-UTR,intron-Distal,intron-Proximal3.788263.07786HepG2UPF1
chr9132402768132402826-CDS,intron-Distal,intron-Proximal5.072515.35117HepG2PRPF8
chr9132401420132401483-CDS,intron-Distal,intron-Proximal5.037537.09786HepG2AQR
chr9132400885132400957-CDS,intron-Distal,intron-Proximal3.696576.34662HepG2PRPF8
chr9132400891132400967-CDS,intron-Distal,intron-Proximal5.002796.03362HepG2AQR
chr9132401431132401482-CDS,intron-Distal,intron-Proximal3.7048311.40635HepG2PRPF8
chr9132402743132402823-CDS,intron-Distal,intron-Proximal4.049855.47926K562AQR
chr9132401443132401501-CDS,intron-Distal,intron-Proximal3.419603.64266HepG2PPIG
chr9132400899132400963-CDS,intron-Distal,intron-Proximal3.427895.87115K562AQR
chr9132400888132400953-CDS,intron-Distal,intron-Proximal4.656594.58968K562PRPF8
chr9132401463132401481-intron-Distal,intron-Proximal4.0663111.58353K562AQR
chr9132401394132401463-intron-Distal,intron-Proximal5.5304823.89296K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ASB6 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ASB6 is not available on ENCORE database.

  • 66 RBPs can affect the levels of ASB6.  








The Knockdown/knockout RNA-Seq assay for ASB6 is not available on ENCORE database.





66 RBPs can affect the gene expression of ASB6 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ASB6ENSG00000148331.7259.54840193.774500.421502.128601.58090HepG2ACO1
ASB6ENSG00000148331.7375.62600180.891501.054106.843306.04840HepG2AKAP1
ASB6ENSG00000148331.7193.46560100.042300.951404.859804.09510HepG2BOP1
ASB6ENSG00000148331.7223.53710142.196200.652502.791102.01520HepG2CIRBP
ASB6ENSG00000148331.7205.37720115.187100.834203.182602.35860HepG2CNOT7
ASB6ENSG00000148331.7255.93290164.589700.636804.367503.59260HepG2CELF1
ASB6ENSG00000148331.7175.99410118.481700.570802.101601.50140HepG2DDX21
ASB6ENSG00000148331.7357.36260173.270201.044307.599206.60940HepG2DDX3X
ASB6ENSG00000148331.7250.87940154.950400.695102.331901.61580HepG2DDX55
ASB6ENSG00000148331.7194.80380129.386100.590202.357501.42500HepG2DDX5
ASB6ENSG00000148331.7220.63340148.866700.567502.071201.52960HepG2DDX6
ASB6ENSG00000148331.7145.0225098.847100.552901.982401.41350HepG2DNAJC2
ASB6ENSG00000148331.7207.34950143.085300.535101.943001.43600HepG2EIF2S1
ASB6ENSG00000148331.7309.53730158.114600.969006.227205.27370HepG2EIF4A3
ASB6ENSG00000148331.7485.97510316.949300.616505.414004.62150HepG2ETF1
ASB6ENSG00000148331.7284.84430159.565900.835904.743003.85350HepG2FXR1
ASB6ENSG00000148331.7232.21710148.002400.649802.852302.17750HepG2G3BP1
ASB6ENSG00000148331.7162.54970101.311900.682002.221301.31380HepG2GNB2L1
ASB6ENSG00000148331.7183.96620104.120100.821103.327402.63010HepG2GPKOW
ASB6ENSG00000148331.7151.21910100.682600.586701.846301.30560HepG2HNRNPA1
ASB6ENSG00000148331.7253.99000150.434700.755503.828903.04610HepG2IGF2BP2
ASB6ENSG00000148331.7271.48610186.766500.539502.098401.38320HepG2LARP4
ASB6ENSG00000148331.7314.82470159.621700.979806.514305.51840HepG2MAGOH
ASB6ENSG00000148331.7238.20930160.509400.569502.121901.56470HepG2MATR3
ASB6ENSG00000148331.7352.59230164.285701.101708.097407.04040HepG2NCBP2
ASB6ENSG00000148331.7218.38940146.286000.578002.319801.65400HepG2PABPC4
ASB6ENSG00000148331.7221.81890156.102300.506802.477701.89630HepG2PCBP1
ASB6ENSG00000148331.7252.63590158.853800.669303.843503.22200HepG2PTBP1
ASB6ENSG00000148331.7244.91190177.799900.461902.051301.52540HepG2PUM1
ASB6ENSG00000148331.7310.56030177.653100.805702.626501.97210HepG2PUM2
ASB6ENSG00000148331.7261.89290197.374700.407902.000701.45800HepG2PUS1
ASB6ENSG00000148331.7398.51990264.909300.589104.283103.67480HepG2RBM22
ASB6ENSG00000148331.7216.68480119.738200.855603.563802.42950HepG2RBM27
ASB6ENSG00000148331.7239.02460176.777500.435101.900601.43320HepG2NELFE
ASB6ENSG00000148331.7149.3732090.111500.729002.639202.03750HepG2RPS19
ASB6ENSG00000148331.7224.82950110.418901.025705.145704.07520HepG2RPS2
ASB6ENSG00000148331.7373.66740191.062400.967606.767205.67990HepG2SF3A3
ASB6ENSG00000148331.7187.9387098.353000.934104.139903.29380HepG2SF3B1
ASB6ENSG00000148331.7247.88380165.362500.583903.057502.43970HepG2SF3B4
ASB6ENSG00000148331.7191.81220115.536100.731303.856103.11770HepG2SMN1
ASB6ENSG00000148331.7228.66110109.433901.063104.721103.68850HepG2SNRNP70
ASB6ENSG00000148331.7444.01290299.202400.569404.745404.14040HepG2SRFBP1
ASB6ENSG00000148331.7263.51890165.381100.672004.857604.06590HepG2SRSF5
ASB6ENSG00000148331.7222.06960140.438400.661003.557902.94920HepG2SRSF9
ASB6ENSG00000148331.7270.44600188.055800.524103.226202.56540HepG2SUCLG1
ASB6ENSG00000148331.7178.94970113.011200.663002.565101.65920HepG2SUPT6H
ASB6ENSG00000148331.7206.67870108.100000.934904.975404.34510HepG2TIAL1
ASB6ENSG00000148331.7154.55140109.067100.502801.950501.46090HepG2TRIM56
ASB6ENSG00000148331.7297.67920163.651900.863003.861502.80950HepG2TUFM
ASB6ENSG00000148331.7226.56180143.194800.661802.544901.94000HepG2U2AF1
ASB6ENSG00000148331.7271.38780173.252200.647402.999002.12880HepG2UBE2L3
ASB6ENSG00000148331.7148.2463091.089700.702502.292201.60060HepG2UCHL5
ASB6ENSG00000148331.7245.37740163.590500.584803.125002.49480HepG2UTP3
ASB6ENSG00000148331.7268.60130186.354900.527303.205602.63050HepG2ZNF622
ASB6ENSG00000148331.71312.76660424.426901.6289017.0963015.80050K562AQR
ASB6ENSG00000148331.7570.37690345.974700.721107.947006.92000K562DDX47
ASB6ENSG00000148331.7211.94460113.320000.903205.191204.11740K562EIF3G
ASB6ENSG00000148331.7345.51760165.532201.061509.429007.90520K562EIF4A3
ASB6ENSG00000148331.7624.11620489.364700.350802.388501.51240K562EIF4G2
ASB6ENSG00000148331.7119.76360186.49470-0.638902.459001.40610K562FKBP4
ASB6ENSG00000148331.7407.12080172.146101.2417015.0839013.78330K562FXR1
ASB6ENSG00000148331.728.2566072.32400-1.355903.734602.88580K562G3BP2
ASB6ENSG00000148331.7216.17700136.594300.662202.673201.67000K562IGF2BP2
ASB6ENSG00000148331.7286.67240143.522000.998005.943104.69480K562MAGOH
ASB6ENSG00000148331.7222.96420143.225800.638403.279002.26550K562MATR3
ASB6ENSG00000148331.7191.69120127.693000.586002.302801.41450K562PCBP2
ASB6ENSG00000148331.7418.93460213.069000.975307.476906.24420K562PRPF8
ASB6ENSG00000148331.7307.97010139.443101.1430010.847109.59480K562PTBP1
ASB6ENSG00000148331.7685.14250533.927000.359702.328901.58010K562PUF60
ASB6ENSG00000148331.7322.18110133.691201.2689012.2751010.31290K562RBM22
ASB6ENSG00000148331.7359.37110216.975100.727803.818202.85500K562RPS19
ASB6ENSG00000148331.7417.40610313.896500.411102.491201.71430K562SF3A3
ASB6ENSG00000148331.7122.9354075.182300.709302.548001.72910K562SF3B4
ASB6ENSG00000148331.7290.75150136.704501.088608.487507.25420K562SRSF1
ASB6ENSG00000148331.7303.49410138.345801.133309.238107.84150K562TARDBP
ASB6ENSG00000148331.7209.91930133.452300.653403.115002.23810K562TIA1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ASB6 is not available on ENCORE database.





1 RBPs can affect the splicing of ASB6 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A3SSASB6ENSG00000148331.7chr9-1324016801324019061324016801324017871324028191324030180.340000.000000.00000longerK562AQR
A3SSASB6ENSG00000148331.7chr9-1324028191324030591324028191324030011324041651324044440.334000.000000.00000longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ASB6 is not avaliable on ENCORE database.