AP006621.5

General Information

Gene Name       : AP006621.5
Gene ID             : ENSG00000279672.1
Essential Gene : No

Functions

Localization

Domains (AlphaFold: AP006621.5)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878AP006621.5ENSG00000279672.10.111.400.76ENCSR000AEF
HepG2AP006621.5ENSG00000279672.17.242.474.86ENCSR985KAT
K562AP006621.5ENSG00000279672.14.742.223.48ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for AP006621.5 is not avaliable on ENCORE database.



Proteins bound to RNA
  • AP006621.5 RNA is bound by 22 proteins.  







eCLIP assay for AP006621.5 is not avaliable on ENCORE database.





22 proteins are bound to AP006621.5 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr11784045784095+3'-UTR,CDS3.778323.01428K562UCHL5
chr11783519783588+3'-UTR,intron-Proximal3.484863.16095HepG2U2AF2
chr11783999784100+3'-UTR,CDS,intron-Proximal3.284313.75706HepG2LSM11
chr11777584777637+5'-UTR3.095404.88713HepG2CSTF2T
chr11777581777638+5'-UTR4.596493.72434HepG2NCBP2
chr11777637777725+5'-UTR,intron-Proximal3.204136.79749HepG2CSTF2T
chr11777638777740+5'-UTR,intron-Proximal3.976864.77154HepG2NCBP2
chr11777940778033+intron-Distal,intron-Proximal3.682503.39884HepG2GRSF1
chr11782027782121+intron-Distal3.050983.05128K562NONO
chr11782029782104+intron-Distal5.001066.58779K562EWSR1
chr11782238782308+intron-Distal3.104774.51156HepG2CSTF2T
chr11777955778040+intron-Distal,intron-Proximal3.470863.80158K562NONO
chr11777956778068+intron-Distal,intron-Proximal4.232396.24469HepG2FKBP4
chr11779127779200+intron-Distal4.083674.00551K562DROSHA
chr11777956778041+intron-Distal,intron-Proximal3.242663.41960K562GTF2F1
chr11779110779181+intron-Distal3.925613.62582HepG2DGCR8
chr11782661782775+intron-Distal4.123025.70158K562EWSR1
chr11777944778050+intron-Distal,intron-Proximal3.295973.27682HepG2LARP4
chr11780570780622+intron-Distal3.226963.73413HepG2RBFOX2
chr11779136779208+intron-Distal3.345546.62443K562CSTF2T
chr11780481780530+intron-Distal4.222464.70168K562CSTF2T
chr11780090780150+intron-Distal3.569914.25110K562CSTF2T
chr11777960778047+intron-Distal,intron-Proximal3.638875.00766K562EWSR1
chr11779079779202+intron-Distal3.8611911.89943HepG2NKRF
chr11780091780164+intron-Distal,intron-Proximal3.526049.30094HepG2CSTF2T
chr11780197780239+intron-Distal3.531764.51839K562EWSR1
chr11779111779191+intron-Distal3.459447.25132K562EWSR1
chr11782650782725+intron-Distal4.574094.23759K562NONO
chr11779536779640+intron-Distal3.708574.95625K562EWSR1
chr11777779777899+intron-Distal,intron-Proximal4.580405.20041HepG2PRPF4
chr11782357782406+intron-Distal3.073423.99763K562SLTM
chr11777902777979+intron-Distal5.095566.75874HepG2PRPF4
chr11777925778048+intron-Distal,intron-Proximal3.207985.87066K562CSTF2T
chr11782584782633+intron-Distal3.357183.46580HepG2CSTF2T
chr11777947778012+intron-Distal5.237825.22630HepG2SLTM
chr11779191779284+intron-Distal3.134313.78503K562FUS
chr11782650782779+intron-Distal3.359753.61021HepG2HNRNPUL1
chr11780099780149+intron-Distal3.855034.71513K562NONO
chr11779126779185+intron-Distal3.786463.15719K562SMNDC1
chr11779972780058+intron-Distal3.351183.12788HepG2DGCR8
chr11779139779218+intron-Distal3.813103.24367K562DDX52
chr11780105780204+intron-Distal,intron-Proximal4.204944.96047K562SLTM
chr11777921778044+intron-Distal,intron-Proximal3.036735.13774K562SLTM
chr11779640779761+intron-Distal3.676514.67846K562EWSR1
chr11777979778032+intron-Distal,intron-Proximal3.726933.90917HepG2PRPF4
chr11780231780290+intron-Distal4.376133.53896K562NONO
chr11779235779316+intron-Distal3.134224.41495HepG2XPO5
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for AP006621.5 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for AP006621.5 is not available on ENCORE database.

  • 35 RBPs can affect the levels of AP006621.5.  








The Knockdown/knockout RNA-Seq assay for AP006621.5 is not available on ENCORE database.





35 RBPs can affect the gene expression of AP006621.5 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
AP006621.5ENSG00000255284.126.4804051.17040-0.950401.975901.44590HepG2ACO1
AP006621.5ENSG00000255284.186.2003043.043901.001802.515001.59120HepG2CCAR1
AP006621.5ENSG00000255284.156.3070025.003801.171102.335901.69660HepG2CPSF6
AP006621.5ENSG00000255284.158.3947024.183701.271702.684302.10040HepG2EIF2S1
AP006621.5ENSG00000255284.141.4187017.999401.202201.874701.33130HepG2HNRNPA1
AP006621.5ENSG00000255284.153.5884020.022601.420202.822002.12280HepG2HNRNPC
AP006621.5ENSG00000255284.163.8090026.992601.241102.822102.16110HepG2MAGOH
AP006621.5ENSG00000255284.124.5965071.36140-1.536704.296603.47100HepG2PUM2
AP006621.5ENSG00000255284.129.1038060.22690-1.049201.765001.32730HepG2RBM22
AP006621.5ENSG00000255284.138.3358017.712101.113901.871201.32430HepG2SAFB2
AP006621.5ENSG00000255284.117.3603058.39330-1.750003.515102.75170HepG2SF3A3
AP006621.5ENSG00000255284.130.2713068.01660-1.167902.075901.62210HepG2SRFBP1
AP006621.5ENSG00000255284.129.3923066.42820-1.176402.907102.26610HepG2SRSF5
AP006621.5ENSG00000255284.146.5677022.683301.037601.896201.30850HepG2SRSF7
AP006621.5ENSG00000255284.139.2570075.54040-0.944302.415401.82650HepG2SUCLG1
AP006621.5ENSG00000255284.146.0615019.320801.253302.442801.96780HepG2TIAL1
AP006621.5ENSG00000255284.135.6698016.715701.093402.144801.47640HepG2UCHL5
AP006621.5ENSG00000255284.158.3221027.840501.066802.492401.80140HepG2XRN2
AP006621.5ENSG00000255284.133.1854090.70310-1.450604.971404.24760K562AGGF1
AP006621.5ENSG00000255284.138.5675094.38010-1.291104.435103.60140K562AKAP8L
AP006621.5ENSG00000255284.177.6616028.178301.462502.948902.13920K562CPSF6
AP006621.5ENSG00000255284.163.9366025.391101.332203.652802.71320K562EIF4A3
AP006621.5ENSG00000255284.160.1106028.672701.067802.216201.44920K562FMR1
AP006621.5ENSG00000255284.1102.9510050.720701.021203.177102.54280K562HNRNPC
AP006621.5ENSG00000255284.142.91420100.16290-1.222803.543402.59700K562KIF1C
AP006621.5ENSG00000255284.154.1603024.852901.123702.590801.77630K562MAGOH
AP006621.5ENSG00000255284.150.6268024.799001.029502.166301.35970K562MATR3
AP006621.5ENSG00000255284.145.57470112.20750-1.299905.106903.79430K562MBNL1
AP006621.5ENSG00000255284.158.1009026.260201.145602.403101.59000K562METAP2
AP006621.5ENSG00000255284.134.8559078.64910-1.174002.713501.84000K562NAA15
AP006621.5ENSG00000255284.112.6538045.25660-1.838603.590902.73550K562PRPF8
AP006621.5ENSG00000255284.121.7324093.60330-2.106707.083406.26020K562PUS1
AP006621.5ENSG00000255284.126.8154091.19890-1.766006.630605.73840K562RBM15
AP006621.5ENSG00000255284.163.0124024.356601.371203.773702.47510K562NELFE
AP006621.5ENSG00000255284.115.3836036.54600-1.248302.091101.37650K562SYNCRIP
AP006621.5ENSG00000255284.169.6972023.955601.540604.244103.36160K562TARDBP
AP006621.5ENSG00000255284.161.7829023.109301.418603.758902.78420K562TIA1
AP006621.5ENSG00000255284.133.3931094.89980-1.506904.117502.43520K562UTP18
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for AP006621.5 is not available on ENCORE database.






No RBPs affect the alternative splcing events of AP006621.5 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for AP006621.5 is not avaliable on ENCORE database.