ACCS

General Information

Gene Name       : ACCS
Gene ID             : ENSG00000110455.13
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ACCS)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ACCSENSG00000110455.1310.6911.8811.29ENCSR000AEF
HepG2ACCSENSG00000110455.130.310.050.18ENCSR985KAT
K562ACCSENSG00000110455.1313.0013.5913.29ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ACCS is not avaliable on ENCORE database.



Proteins bound to RNA
  • ACCS RNA is bound by 10 proteins.  







eCLIP assay for ACCS is not avaliable on ENCORE database.





10 proteins are bound to ACCS RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr114409712944097178+3'-UTR,CDS,intron-Proximal4.946774.48364K562DDX24
chr114409893944098986+3'-UTR,intron-Proximal3.036266.16854K562TIA1
chr114409892544098982+3'-UTR,CDS,intron-Proximal4.805338.52787K562AQR
chr114410264244102811+CDS,intron-Proximal4.3436614.76150K562AQR
chr114409281344092866+CDS,intron-Proximal3.098873.02345K562ZNF622
chr114409280544092877+CDS,intron-Proximal3.981965.74135K562DDX24
chr114409947044099486+CDS,intron-Proximal5.9211011.25363K562AQR
chr114410253044102596+CDS,intron-Proximal3.732914.88100K562AQR
chr114410268344102739+CDS,intron-Proximal4.298916.11702K562SF3B4
chr114410266044102771+CDS,intron-Proximal5.954497.84667K562EFTUD2
chr114408941344089466+CDS,intron-Distal,intron-Proximal3.815254.14015K562DDX24
chr114409615644096221+CDS,intron-Proximal3.568363.99908K562BUD13
chr114410101144101084+CDS,intron-Proximal3.249154.50936K562SF3B4
chr114410041344100441+intron-Distal,intron-Proximal3.393474.71867K562TIA1
chr114410068244100757+intron-Distal6.5878724.47834K562HNRNPL
chr114410008144100137+intron-Distal,intron-Proximal3.111507.46934K562KHSRP
chr114410057444100682+intron-Distal5.1833725.10161K562HNRNPL
chr114410003844100108+intron-Distal4.7988114.46867K562TIA1
chr114410003744100082+intron-Distal3.752914.95247K562PRPF8
chr114410117044101216+intron-Proximal5.077074.65563K562AQR
chr114409948644099547+intron-Proximal4.8395518.73357K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ACCS is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ACCS is not available on ENCORE database.

  • 62 RBPs can affect the levels of ACCS.  








The Knockdown/knockout RNA-Seq assay for ACCS is not available on ENCORE database.





62 RBPs can affect the gene expression of ACCS :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ACCSENSG00000110455.939.320904.791003.036804.956804.27170HepG2AKAP1
ACCSENSG00000110455.938.325200.583606.037209.006007.65480HepG2CNOT7
ACCSENSG00000110455.919.307104.588002.073101.902401.37390HepG2DDX3X
ACCSENSG00000110455.918.146404.587301.983902.193201.60010HepG2DNAJC2
ACCSENSG00000110455.923.068903.919202.557203.165702.45580HepG2G3BP1
ACCSENSG00000110455.931.208600.541005.850008.085906.20080HepG2GRSF1
ACCSENSG00000110455.918.214605.168001.817301.890201.37960HepG2HNRNPU
ACCSENSG00000110455.922.455603.741502.585302.217801.34670HepG2IGF2BP3
ACCSENSG00000110455.923.305606.068201.941202.337501.82720HepG2PTBP1
ACCSENSG00000110455.925.838608.318301.635102.232201.66530HepG2PUS1
ACCSENSG00000110455.912.710900.590304.428402.836702.02740HepG2RPS3A
ACCSENSG00000110455.926.931505.029502.420703.589303.03530HepG2TIAL1
ACCSENSG00000110455.9377.12200526.08170-0.480303.083801.82970K562AARS
ACCSENSG00000110455.9979.76300727.240300.429903.246101.90740K562ABCF1
ACCSENSG00000110455.9895.505801335.26140-0.576309.878008.88910K562AGGF1
ACCSENSG00000110455.91126.533501467.20750-0.381203.369602.26120K562AKAP8
ACCSENSG00000110455.9544.177301072.91340-0.979406.808005.95350K562AQR
ACCSENSG00000110455.9483.13090980.63790-1.0213022.7253021.04620K562DDX47
ACCSENSG00000110455.91024.864101495.14900-0.544908.923307.17800K562DKC1
ACCSENSG00000110455.9860.59930685.103700.328902.920101.67030K562EIF2S1
ACCSENSG00000110455.9749.80890616.525600.282302.024401.39190K562EIF2S2
ACCSENSG00000110455.9370.35210517.44800-0.482503.787102.86610K562EIF3G
ACCSENSG00000110455.9436.51850651.66560-0.578105.036603.92750K562EIF4A3
ACCSENSG00000110455.9664.07420522.781200.345002.048101.31500K562FIP1L1
ACCSENSG00000110455.9294.65440677.70140-1.2016021.5693019.98970K562FXR1
ACCSENSG00000110455.9379.98140545.72450-0.522202.802402.08860K562G3BP2
ACCSENSG00000110455.91015.94120821.526200.306302.093001.42950K562GRSF1
ACCSENSG00000110455.9704.26690500.288100.493303.974401.50170K562GRWD1
ACCSENSG00000110455.9409.35160575.54250-0.491603.498602.83800K562HNRNPC
ACCSENSG00000110455.9743.13960514.002700.531804.562103.05000K562HNRNPF
ACCSENSG00000110455.9274.37770430.00370-0.648203.895702.77860K562HNRNPM
ACCSENSG00000110455.91125.80070882.776200.350703.486202.48520K562HNRNPU
ACCSENSG00000110455.9505.08060759.95840-0.589406.069304.80600K562MAGOH
ACCSENSG00000110455.91131.247201411.45470-0.319302.655101.60730K562MAK16
ACCSENSG00000110455.91053.882101651.83710-0.648409.246007.38990K562MBNL1
ACCSENSG00000110455.9962.24730675.074900.511305.164304.08310K562MTPAP
ACCSENSG00000110455.9857.018101157.81490-0.434002.513601.68200K562NAA15
ACCSENSG00000110455.9985.61240750.115900.393805.092904.12360K562NSUN2
ACCSENSG00000110455.9874.81270566.741900.626205.878803.54110K562NUSAP1
ACCSENSG00000110455.9435.63170743.00380-0.770309.697207.13680K562PCBP1
ACCSENSG00000110455.91282.46360826.244500.634206.017304.78500K562PCBP3
ACCSENSG00000110455.9807.34970561.940900.522704.190002.37880K562PHF6
ACCSENSG00000110455.91238.45850873.525300.503504.180402.20660K562PKM
ACCSENSG00000110455.9891.43050633.763000.492104.829403.77040K562POLR2G
ACCSENSG00000110455.9173.55170548.68650-1.6606018.9994017.01530K562PRPF8
ACCSENSG00000110455.9867.35340516.046000.749008.417706.65810K562PSIP1
ACCSENSG00000110455.9378.70770738.37040-0.9633014.3574012.90700K562PTBP1
ACCSENSG00000110455.9662.099601455.79090-1.1367022.3284019.92060K562PUF60
ACCSENSG00000110455.91115.287501377.96890-0.305102.028601.55010K562PUS1
ACCSENSG00000110455.9846.166201342.56030-0.6660010.875309.72270K562RBM15
ACCSENSG00000110455.9518.20840707.83930-0.449903.393202.45710K562RBM22
ACCSENSG00000110455.9355.26360517.47950-0.542604.173102.49030K562RBM25
ACCSENSG00000110455.9705.87970470.882100.584005.711804.27970K562RCC2
ACCSENSG00000110455.9352.68180558.77100-0.663904.682003.61690K562RPS19
ACCSENSG00000110455.9488.38230665.23400-0.445902.559601.60020K562RPS3
ACCSENSG00000110455.9334.46580564.68150-0.755607.070905.35310K562SAFB
ACCSENSG00000110455.9358.20140567.32240-0.663406.794305.41790K562SF3B4
ACCSENSG00000110455.9592.71400446.377700.409002.521201.55380K562SRFBP1
ACCSENSG00000110455.9454.03870723.88410-0.672907.111005.98490K562SRSF1
ACCSENSG00000110455.9306.50690635.67350-1.0524015.0324013.13070K562SYNCRIP
ACCSENSG00000110455.9788.25320496.343000.667205.804804.39850K562TIAL1
ACCSENSG00000110455.9749.93660527.363800.507903.969302.79350K562TRIM56
ACCSENSG00000110455.9863.13080611.499800.497103.861902.13920K562TRIP6
ACCSENSG00000110455.91031.20720795.360100.374604.223703.35470K562UPF1
ACCSENSG00000110455.9945.302301397.04020-0.563502.810801.50330K562UTP18
ACCSENSG00000110455.91039.90800680.570600.611507.285205.82530K562WDR3
ACCSENSG00000110455.9492.91250675.92670-0.455503.547301.46440K562ZNF800
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ACCS is not available on ENCORE database.





2 RBPs can affect the splicing of ACCS :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A3SSACCSENSG00000110455.9chr11+441049734410512744105103441051274410471844104861-0.303000.008200.04459shorterK562AQR
RIACCSENSG00000110455.9chr11+4409939444100334440993944409947244100233441003340.241000.004240.07217includedK562RBM22

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ACCS is not avaliable on ENCORE database.