ZNF883

General Information

Gene Name       : ZNF883
Gene ID             : ENSG00000228623.6
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZNF883)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZNF883ENSG00000228623.60.730.290.51ENCSR000AEF
HepG2ZNF883ENSG00000228623.64.668.296.47ENCSR985KAT
K562ZNF883ENSG00000228623.62.783.813.29ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZNF883 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on ZNF883 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for ZNF883 is not avaliable on ENCORE database.






NO known proteins are bound to ZNF883 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for ZNF883 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZNF883 is not available on ENCORE database.

  • 56 RBPs can affect the levels of ZNF883.  








The Knockdown/knockout RNA-Seq assay for ZNF883 is not available on ENCORE database.





56 RBPs can affect the gene expression of ZNF883 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZNF883ENSG00000228623.2181.94720268.89120-0.563502.711001.72220HepG2ADAR
ZNF883ENSG00000228623.2726.80900440.294300.723005.300304.59240HepG2AKAP1
ZNF883ENSG00000228623.2520.57270391.218300.412002.944802.23970HepG2AUH
ZNF883ENSG00000228623.2981.64850580.383500.758104.927704.15870HepG2BOP1
ZNF883ENSG00000228623.2536.79330421.101900.350102.000701.33710HepG2CALR
ZNF883ENSG00000228623.2254.04450346.11040-0.446201.966101.30870HepG2CIRBP
ZNF883ENSG00000228623.2254.36730421.74830-0.729504.768103.96420HepG2DDX3X
ZNF883ENSG00000228623.2511.97400381.881400.422802.438401.48700HepG2DDX5
ZNF883ENSG00000228623.2239.28110362.33840-0.598603.040602.39540HepG2DDX6
ZNF883ENSG00000228623.2168.13590348.27710-1.050607.737906.78250HepG2EIF2S1
ZNF883ENSG00000228623.2182.62530384.86410-1.075508.305407.20150HepG2EIF4A3
ZNF883ENSG00000228623.2337.27340245.223100.459702.480501.68870HepG2EWSR1
ZNF883ENSG00000228623.2285.12420179.736300.665603.990802.48690HepG2FKBP4
ZNF883ENSG00000228623.2478.58920325.034300.558102.759501.64590HepG2FUS
ZNF883ENSG00000228623.2257.61450388.38150-0.592303.298402.54590HepG2FXR1
ZNF883ENSG00000228623.2123.53730202.83530-0.715403.238602.25940HepG2GEMIN5
ZNF883ENSG00000228623.2153.67360304.05340-0.984506.631305.59550HepG2HNRNPC
ZNF883ENSG00000228623.2207.64500364.86540-0.813205.442404.48750HepG2HNRNPK
ZNF883ENSG00000228623.2234.85660372.06430-0.663803.048302.29080HepG2IGF2BP1
ZNF883ENSG00000228623.2159.52240388.51740-1.2842011.5894010.28120HepG2MAGOH
ZNF883ENSG00000228623.2250.17410390.68050-0.643103.454302.75600HepG2MATR3
ZNF883ENSG00000228623.2383.09390281.220300.445902.569301.39940HepG2NAA15
ZNF883ENSG00000228623.2291.18140399.87400-0.457602.133901.57470HepG2NCBP2
ZNF883ENSG00000228623.2524.21110328.643500.673503.244002.42040HepG2NOL12
ZNF883ENSG00000228623.278.58020195.49950-1.314905.853004.52910HepG2PABPC1
ZNF883ENSG00000228623.2294.08320388.34220-0.401102.398301.88280HepG2PTBP1
ZNF883ENSG00000228623.2172.24200313.70620-0.865006.262705.41420HepG2PUF60
ZNF883ENSG00000228623.2540.57940420.601900.362002.209901.64060HepG2QKI
ZNF883ENSG00000228623.2656.59910454.701800.530004.044403.03070HepG2RBM15
ZNF883ENSG00000228623.2755.18500375.423501.008207.205906.46100HepG2RBM22
ZNF883ENSG00000228623.2270.47170381.71660-0.497002.962102.26800HepG2RBM25
ZNF883ENSG00000228623.2305.71330432.19450-0.499503.359602.77620HepG2NELFE
ZNF883ENSG00000228623.2312.13380402.51800-0.366902.145001.59310HepG2RECQL
ZNF883ENSG00000228623.2275.37370164.906800.739603.908302.99340HepG2RRP9
ZNF883ENSG00000228623.2529.47310322.988700.713003.914202.08030HepG2RTF1
ZNF883ENSG00000228623.2316.62670404.32930-0.352702.008401.49150HepG2SF3B4
ZNF883ENSG00000228623.2278.20770422.02620-0.601204.779604.20090HepG2SRSF1
ZNF883ENSG00000228623.2237.08610371.19450-0.646804.930604.04280HepG2SRSF7
ZNF883ENSG00000228623.2228.96810368.15640-0.685205.767305.07860HepG2SSB
ZNF883ENSG00000228623.297.60050214.96610-1.139102.584201.92780HepG2SUPV3L1
ZNF883ENSG00000228623.2338.29990561.69780-0.731502.526701.82940HepG2TARDBP
ZNF883ENSG00000228623.2112.24050293.46740-1.3866013.4390012.47730HepG2TIAL1
ZNF883ENSG00000228623.2512.58170353.971600.534003.216402.54270HepG2U2AF1
ZNF883ENSG00000228623.2797.82660330.556301.2711028.2993026.68940HepG2UTP3
ZNF883ENSG00000228623.2260.63130346.56370-0.411102.505301.86090HepG2ZC3H8
ZNF883ENSG00000228623.2282.71140176.649200.678303.331301.96660K562APOBEC3C
ZNF883ENSG00000228623.2128.93270192.50360-0.578302.331401.60530K562CPSF6
ZNF883ENSG00000228623.2338.54740190.613000.828604.311803.52370K562DDX47
ZNF883ENSG00000228623.2100.2301050.072501.001103.333902.67810K562FXR1
ZNF883ENSG00000228623.2119.46210183.79650-0.621602.414001.67020K562GPKOW
ZNF883ENSG00000228623.2139.6563071.977000.956204.441403.24600K562MATR3
ZNF883ENSG00000228623.2103.02710179.40460-0.800203.403702.42820K562METAP2
ZNF883ENSG00000228623.230.9963088.00130-1.505404.636801.82840K562NFX1
ZNF883ENSG00000228623.2348.03300218.992600.668203.926002.12940K562NOL12
ZNF883ENSG00000228623.242.66660110.04570-1.366903.892103.26330K562PUS1
ZNF883ENSG00000228623.2133.8391067.473100.988003.640002.70040K562RPS19
ZNF883ENSG00000228623.2351.73190175.019701.006905.614703.24640K562RPS3A
ZNF883ENSG00000228623.2188.79630132.323700.512702.049501.34140K562SYNCRIP
ZNF883ENSG00000228623.2232.77640130.829000.831205.603004.44140K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZNF883 is not available on ENCORE database.





1 RBPs can affect the splicing of ZNF883 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEZNF883ENSG00000228623.2chr9-115773420115773507115764273115764353115774429115774507-0.326000.000060.00320excludedHepG2SF3A3

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ZNF883 is not avaliable on ENCORE database.