TMEM52

General Information

Gene Name       : TMEM52
Gene ID             : ENSG00000178821.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TMEM52)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TMEM52ENSG00000178821.120.000.000.00ENCSR000AEF
HepG2TMEM52ENSG00000178821.1217.036.0411.54ENCSR985KAT
K562TMEM52ENSG00000178821.1213.119.4811.29ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TMEM52 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TMEM52 RNA is bound by 1 proteins.  







eCLIP assay for TMEM52 is not avaliable on ENCORE database.





1 proteins are bound to TMEM52 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr118506141850701-CDS,intron-Distal,intron-Proximal4.370537.51958HepG2DDX3X
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TMEM52 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TMEM52 is not available on ENCORE database.

  • 71 RBPs can affect the levels of TMEM52.  








The Knockdown/knockout RNA-Seq assay for TMEM52 is not available on ENCORE database.





71 RBPs can affect the gene expression of TMEM52 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TMEM52ENSG00000178821.824.8084062.89650-1.342202.682701.62640HepG2AATF
TMEM52ENSG00000178821.841.46980132.85100-1.6797010.257509.24040HepG2ACO1
TMEM52ENSG00000178821.845.83290200.72650-2.130804.546503.88700HepG2AKAP1
TMEM52ENSG00000178821.890.15670133.44960-0.565801.979701.31660HepG2AKAP8L
TMEM52ENSG00000178821.880.78290186.39680-1.206307.424406.38820HepG2AUH
TMEM52ENSG00000178821.832.2290097.82220-1.601806.016305.17370HepG2BOP1
TMEM52ENSG00000178821.849.41190124.37240-1.331705.577004.53020HepG2CALR
TMEM52ENSG00000178821.853.02820132.79130-1.324307.266706.28370HepG2CKAP4
TMEM52ENSG00000178821.836.91190100.72180-1.448205.916105.04350HepG2CELF1
TMEM52ENSG00000178821.878.16470192.22430-1.298202.428801.83900HepG2DDX3X
TMEM52ENSG00000178821.8119.5929061.963900.948503.288402.52650HepG2DNAJC21
TMEM52ENSG00000178821.8111.34750180.23120-0.694802.831601.64800HepG2EIF2S2
TMEM52ENSG00000178821.837.0734086.26500-1.218403.910702.84550HepG2EIF3D
TMEM52ENSG00000178821.849.56620170.85560-1.785303.622102.84070HepG2EIF4B
TMEM52ENSG00000178821.879.97110129.79180-0.698602.447501.66170HepG2EWSR1
TMEM52ENSG00000178821.846.35190239.87610-2.3716017.0702015.44140HepG2FIP1L1
TMEM52ENSG00000178821.878.92930164.20330-1.056901.858601.30760HepG2G3BP1
TMEM52ENSG00000178821.8158.77810101.786400.641402.006701.45630HepG2GPKOW
TMEM52ENSG00000178821.8166.9644093.347900.838804.573503.67850HepG2HNRNPF
TMEM52ENSG00000178821.892.34080165.52670-0.842003.617502.54040HepG2HNRNPM
TMEM52ENSG00000178821.8179.0467091.922500.961705.599404.60650HepG2IGF2BP1
TMEM52ENSG00000178821.837.94260156.74860-2.046603.777302.62500HepG2IGF2BP3
TMEM52ENSG00000178821.8119.3450070.613300.757003.143102.36580HepG2ILF2
TMEM52ENSG00000178821.880.22990177.18280-1.143002.158201.57650HepG2MAGOH
TMEM52ENSG00000178821.838.2920090.28010-1.237402.425101.43800HepG2METAP2
TMEM52ENSG00000178821.876.86010194.17580-1.337108.005206.69470HepG2MSI2
TMEM52ENSG00000178821.876.4782033.004901.212303.070202.13310HepG2PABPC1
TMEM52ENSG00000178821.863.93940162.24490-1.343402.807702.08100HepG2PABPC4
TMEM52ENSG00000178821.8146.6237061.657701.249707.121805.97980HepG2PPIL4
TMEM52ENSG00000178821.870.18730159.65820-1.185706.083205.33480HepG2PTBP1
TMEM52ENSG00000178821.8157.00190102.511700.614902.228501.68510HepG2PUF60
TMEM52ENSG00000178821.869.60480108.82180-0.644701.990101.47070HepG2PUM1
TMEM52ENSG00000178821.871.00720135.31290-0.930304.358603.61780HepG2PUS1
TMEM52ENSG00000178821.864.01740172.91450-1.433508.620607.61240HepG2QKI
TMEM52ENSG00000178821.87.6245054.95860-2.849602.492801.82200HepG2RAVER1
TMEM52ENSG00000178821.8126.89380222.56230-0.810604.801903.71120HepG2RBM15
TMEM52ENSG00000178821.851.60630178.87430-1.7933012.3708011.43610HepG2RBM22
TMEM52ENSG00000178821.899.39380156.93080-0.658902.461501.82180HepG2RBM25
TMEM52ENSG00000178821.886.62450177.68450-1.036505.487504.76760HepG2NELFE
TMEM52ENSG00000178821.883.0299036.299801.193603.357002.47630HepG2RPS3A
TMEM52ENSG00000178821.8136.9021061.559601.153003.113002.43790HepG2SAFB2
TMEM52ENSG00000178821.882.12410194.71560-1.245506.170605.13990HepG2SF3A3
TMEM52ENSG00000178821.8105.16700166.22540-0.660502.653702.07230HepG2SF3B4
TMEM52ENSG00000178821.8165.4048098.295000.750702.694802.00030HepG2SLBP
TMEM52ENSG00000178821.853.02430106.97560-1.012602.714601.94030HepG2SNRNP70
TMEM52ENSG00000178821.844.85370202.03030-2.1713019.3758018.36360HepG2SRFBP1
TMEM52ENSG00000178821.878.21050173.50310-1.149506.289105.64740HepG2SRSF1
TMEM52ENSG00000178821.8138.2258091.706400.591802.070101.45860HepG2SRSF7
TMEM52ENSG00000178821.867.29670141.15380-1.068705.419804.69140HepG2SRSF9
TMEM52ENSG00000178821.884.45210155.95070-0.884902.616202.06970HepG2TAF15
TMEM52ENSG00000178821.890.48100143.29810-0.663302.352801.58000HepG2TIA1
TMEM52ENSG00000178821.8179.8009067.146301.420909.502108.67260HepG2TIAL1
TMEM52ENSG00000178821.8113.2592067.775500.740702.695002.13650HepG2TRIM56
TMEM52ENSG00000178821.8168.16740100.151400.747602.072401.32630HepG2TUFM
TMEM52ENSG00000178821.842.73940205.21880-2.2635016.7379015.14380HepG2U2AF1
TMEM52ENSG00000178821.8102.35510166.71850-0.703802.824702.22260HepG2UTP3
TMEM52ENSG00000178821.884.36420189.91820-1.170708.365007.54700HepG2ZNF622
TMEM52ENSG00000178821.8162.25250105.860200.616002.255601.73490K562AGGF1
TMEM52ENSG00000178821.8180.06750116.310400.630502.533101.59980K562AKAP8
TMEM52ENSG00000178821.879.35020167.04960-1.074004.010103.32890K562AQR
TMEM52ENSG00000178821.831.9204092.51350-1.535205.238704.02660K562BOP1
TMEM52ENSG00000178821.8187.40120263.93230-0.494002.547801.61170K562CELF1
TMEM52ENSG00000178821.8175.74070118.549800.567902.278301.49430K562DKC1
TMEM52ENSG00000178821.852.1847024.846401.070502.199401.48420K562EIF3G
TMEM52ENSG00000178821.8145.91030214.55950-0.556302.950801.98220K562EIF4G2
TMEM52ENSG00000178821.859.21570100.08120-0.757102.045101.30600K562FMR1
TMEM52ENSG00000178821.81.6665016.95860-3.347103.135402.37410K562G3BP2
TMEM52ENSG00000178821.857.05400135.34130-1.246205.341704.53710K562HNRNPC
TMEM52ENSG00000178821.881.4841038.826201.069403.251102.33200K562MAGOH
TMEM52ENSG00000178821.8234.41040130.964400.839804.844703.57690K562MBNL1
TMEM52ENSG00000178821.870.11320128.20640-0.870702.092201.39580K562POLR2G
TMEM52ENSG00000178821.8192.22380106.926900.846104.242903.19690K562PPIG
TMEM52ENSG00000178821.8194.23290121.344900.678602.384901.55200K562PSIP1
TMEM52ENSG00000178821.887.2970037.725201.210304.352303.53720K562PTBP1
TMEM52ENSG00000178821.8154.66260234.08540-0.597902.654901.85640K562PUF60
TMEM52ENSG00000178821.8205.11080106.439100.946305.308404.51080K562RBM15
TMEM52ENSG00000178821.8199.97600104.940600.930204.764903.31060K562SRFBP1
TMEM52ENSG00000178821.866.3614034.943900.925202.282701.34550K562SRSF5
TMEM52ENSG00000178821.878.2719036.102501.116303.202502.31250K562TIA1
TMEM52ENSG00000178821.8233.37850123.980200.912505.148303.75950K562TRIM56
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TMEM52 is not available on ENCORE database.






No RBPs affect the alternative splcing events of TMEM52 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for TMEM52 is not avaliable on ENCORE database.