SUPT20H

General Information

Gene Name       : SUPT20H
Gene ID             : ENSG00000102710.19
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: SUPT20H)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SUPT20HENSG00000102710.1959.4147.5153.46ENCSR000AEF
HepG2SUPT20HENSG00000102710.1926.8037.9032.35ENCSR985KAT
K562SUPT20HENSG00000102710.1938.3448.2643.30ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SUPT20H is not avaliable on ENCORE database.



Proteins bound to RNA

  • SUPT20H RNA is bound by 16 proteins.  







eCLIP assay for SUPT20H is not avaliable on ENCORE database.





16 proteins are bound to SUPT20H RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr133759570037595754-3'-UTR,CDS,intron-Distal,intron-Proximal3.353706.82255HepG2U2AF2
chr133759141537591504-3'-UTR,CDS,intron-Distal,intron-Proximal3.164815.13250K562YBX3
chr133758391037583968-3'-UTR,CDS,intron-Distal4.499149.01206HepG2U2AF2
chr133758475237584869-3'-UTR,CDS,intron-Distal,intron-Proximal4.008313.16986HepG2QKI
chr133758474937584842-3'-UTR,CDS,intron-Distal,intron-Proximal5.028596.83215HepG2U2AF2
chr133763373437633795-5'-UTR,intron-Distal,intron-Proximal3.749756.40214HepG2NCBP2
chr133763368937633794-5'-UTR,intron-Distal,intron-Proximal3.795735.06399K562DDX3X
chr133762562337625639-5'-UTR,CDS,intron-Distal,intron-Proximal3.182693.07714K562YBX3
chr133763368537633795-5'-UTR,intron-Distal,intron-Proximal3.791186.05537HepG2DDX3X
chr133763366337633734-5'-UTR,intron-Distal,intron-Proximal3.405397.21984HepG2NCBP2
chr133759847637598579-CDS,intron-Distal,intron-Proximal3.895154.68902HepG2PPIG
chr133760570337605755-CDS,intron-Distal,intron-Proximal3.291076.20035HepG2BCLAF1
chr133760237237602443-CDS,intron-Distal,intron-Proximal3.161175.00905HepG2BCLAF1
chr133761938537619512-CDS,intron-Distal,intron-Proximal4.0268816.64241HepG2BCLAF1
chr133762202237622098-CDS,intron-Distal,intron-Proximal4.378834.59919HepG2AQR
chr133760758537607612-CDS,intron-Distal,intron-Proximal4.067343.06595HepG2BCLAF1
chr133761821337618280-CDS,intron-Distal,intron-Proximal3.698867.89260HepG2BCLAF1
chr133761821137618280-CDS,intron-Distal,intron-Proximal4.255784.42734K562UCHL5
chr133761821437618271-CDS,intron-Distal,intron-Proximal3.660686.70085HepG2PPIG
chr133759946437599524-CDS,intron-Distal3.831133.51789K562IGF2BP2
chr133761453937614596-CDS,intron-Distal,intron-Proximal3.991348.49795HepG2BCLAF1
chr133760035737600416-CDS,intron-Distal,intron-Proximal4.447863.77802HepG2U2AF2
chr133761477037614830-CDS,intron-Distal,intron-Proximal3.8519111.53232HepG2BCLAF1
chr133760389837603976-CDS,intron-Distal,intron-Proximal4.3376211.99763HepG2BCLAF1
chr133760765137607674-CDS,intron-Distal,intron-Proximal3.469027.38488K562YBX3
chr133762202137622073-CDS,intron-Distal3.220614.30677K562YBX3
chr133759822037598288-CDS,intron-Distal,intron-Proximal3.126735.39266HepG2GRWD1
chr133761471237614741-CDS,intron-Distal,intron-Proximal4.665304.78529HepG2BCLAF1
chr133762166537621718-CDS,intron-Distal,intron-Proximal4.372827.82199HepG2BCLAF1
chr133760761537607631-CDS,intron-Distal,intron-Proximal3.073753.24816K562YBX3
chr133761942337619512-CDS,intron-Distal,intron-Proximal3.084685.14343HepG2PPIG
chr133759375937593821-intron-Distal5.020055.51162HepG2U2AF2
chr133759792037598041-intron-Distal4.2408713.13856K562KHSRP
chr133760397537604176-intron-Distal,intron-Proximal4.489514.31512K562KHSRP
chr133759798737598125-intron-Distal,intron-Proximal4.2144015.53664HepG2KHSRP
chr133761342237613476-intron-Distal3.225243.35050HepG2SUGP2
chr133759804237598136-intron-Distal,intron-Proximal4.7920815.75253K562KHSRP
chr133760271937602802-intron-Distal4.152834.79379K562KHSRP
chr133759803737598122-intron-Distal,intron-Proximal4.777736.08021K562PRPF8
chr133759546037595527-intron-Distal,intron-Proximal3.253853.73266K562KHSRP
chr133760630937606437-intron-Distal5.4077010.11308HepG2PCBP2
chr133760875937608819-intron-Distal4.162153.54208HepG2SUGP2
chr133759336237593448-intron-Distal,intron-Proximal3.696293.25538K562KHSRP
chr133762031737620451-intron-Distal3.548883.94088HepG2QKI
chr133759876437598866-intron-Distal4.515844.40847HepG2PTBP1
chr133761328937613328-intron-Distal4.088734.28663HepG2SUGP2
chr133761337237613422-intron-Distal3.446833.84025HepG2SUGP2
chr133760949337609545-intron-Distal3.183803.46325HepG2SUGP2
chr133762029637620395-intron-Distal3.365203.48890K562KHSRP
chr133760838437608447-intron-Distal3.033223.72889HepG2SUGP2
chr133760817637608248-intron-Distal3.346023.10640HepG2SUGP2
chr133761315137613256-intron-Distal4.207258.81208HepG2SUGP2
chr133760895237609029-intron-Distal3.804796.25619HepG2SUGP2
chr133759790837597987-intron-Distal4.312206.89679HepG2KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for SUPT20H is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SUPT20H is not available on ENCORE database.

  • 50 RBPs can affect the levels of SUPT20H.  








The Knockdown/knockout RNA-Seq assay for SUPT20H is not available on ENCORE database.





50 RBPs can affect the gene expression of SUPT20H :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SUPT20HENSG00000102710.151248.183401441.66940-0.207902.115801.45490HepG2DAZAP1
SUPT20HENSG00000102710.151308.876801059.811200.304401.821001.30210HepG2DDX3X
SUPT20HENSG00000102710.151155.277601466.72540-0.344402.613501.62730HepG2DDX5
SUPT20HENSG00000102710.15900.854801047.56050-0.217702.096501.51400HepG2DNAJC2
SUPT20HENSG00000102710.151085.45750832.430600.382802.628301.74460HepG2EIF3D
SUPT20HENSG00000102710.151569.85820941.632800.737306.095405.10400HepG2EIF4B
SUPT20HENSG00000102710.151917.222201588.225100.271503.357902.70540HepG2ETF1
SUPT20HENSG00000102710.151015.98270764.439700.410303.422502.55190HepG2FUBP3
SUPT20HENSG00000102710.151292.192001067.049400.276101.846001.30540HepG2HNRNPA1
SUPT20HENSG00000102710.151262.206301483.41910-0.233002.082901.45460HepG2HNRNPF
SUPT20HENSG00000102710.151099.856901313.23520-0.255802.937102.24490HepG2HNRNPL
SUPT20HENSG00000102710.15931.426801179.03880-0.340103.529902.85370HepG2HNRNPU
SUPT20HENSG00000102710.151167.838501460.75600-0.322902.372601.69980HepG2IGF2BP1
SUPT20HENSG00000102710.151382.68240976.057000.502304.229103.42120HepG2MAGOH
SUPT20HENSG00000102710.151082.178601429.55910-0.401604.551603.57390HepG2NOL12
SUPT20HENSG00000102710.15888.251901051.61010-0.243601.935601.31060HepG2PPIL4
SUPT20HENSG00000102710.151230.39950961.879800.355104.162303.52160HepG2PTBP1
SUPT20HENSG00000102710.15946.313101364.65320-0.528105.859705.03590HepG2PUF60
SUPT20HENSG00000102710.151217.301601448.65580-0.251003.132702.51150HepG2PUM1
SUPT20HENSG00000102710.151545.884001327.460000.219701.838001.39330HepG2RBM22
SUPT20HENSG00000102710.151237.26740945.453000.388002.683902.01790HepG2RBM25
SUPT20HENSG00000102710.151344.630001001.452700.425005.812405.00880HepG2SF3B4
SUPT20HENSG00000102710.151061.836401308.52300-0.301403.665802.87710HepG2SLBP
SUPT20HENSG00000102710.151308.389401862.41010-0.509402.363101.64350HepG2SNRNP70
SUPT20HENSG00000102710.151970.582101499.313300.394207.014906.31790HepG2SRFBP1
SUPT20HENSG00000102710.151578.490801045.295000.5945011.6062010.78100HepG2SRSF1
SUPT20HENSG00000102710.151628.156201301.752000.322704.382603.76760HepG2SSB
SUPT20HENSG00000102710.15667.47870905.94970-0.440702.571001.91620HepG2SUPV3L1
SUPT20HENSG00000102710.15837.607201155.89530-0.464706.723405.91210HepG2TRIM56
SUPT20HENSG00000102710.151037.711501410.94650-0.443303.870303.13170HepG2U2AF1
SUPT20HENSG00000102710.151595.982201330.590400.262303.089302.46280HepG2UTP3
SUPT20HENSG00000102710.151022.247101209.97680-0.243202.622901.96650HepG2ZC3H8
SUPT20HENSG00000102710.151570.680501791.44480-0.189701.798301.32040K562AGGF1
SUPT20HENSG00000102710.151550.879601864.06540-0.265401.984101.42910K562AKAP8L
SUPT20HENSG00000102710.151091.219801546.08670-0.502705.340804.57170K562AQR
SUPT20HENSG00000102710.152445.256001995.841800.292903.951103.19210K562DDX47
SUPT20HENSG00000102710.15560.25960792.23020-0.499803.822202.73710K562EFTUD2
SUPT20HENSG00000102710.151351.355501648.11020-0.286402.230201.51670K562GPKOW
SUPT20HENSG00000102710.151251.124401503.58170-0.265201.989901.34320K562GRSF1
SUPT20HENSG00000102710.151437.963301102.041000.383703.757402.50450K562HNRNPA1
SUPT20HENSG00000102710.151407.836101134.361200.311502.635902.05140K562HNRNPC
SUPT20HENSG00000102710.151665.217401220.371600.448306.103104.76410K562HNRNPU
SUPT20HENSG00000102710.151633.261301978.28900-0.276502.273001.53460K562KIF1C
SUPT20HENSG00000102710.15715.315801043.82290-0.545205.374704.00100K562PCBP2
SUPT20HENSG00000102710.151412.062001760.51210-0.318202.415201.65150K562PPIG
SUPT20HENSG00000102710.15533.11880770.93310-0.532104.100703.18730K562PRPF8
SUPT20HENSG00000102710.15926.276601139.72060-0.299202.387501.76320K562PTBP1
SUPT20HENSG00000102710.151869.383302296.04370-0.296602.414401.65400K562PUF60
SUPT20HENSG00000102710.152059.731802392.86540-0.216302.306801.42890K562PUM2
SUPT20HENSG00000102710.151290.660501848.74300-0.518405.185504.47150K562PUS1
SUPT20HENSG00000102710.151465.347901801.23730-0.297703.118502.49450K562RBM15
SUPT20HENSG00000102710.15739.138701093.01330-0.564405.849704.56810K562RBM22
SUPT20HENSG00000102710.15899.121601150.18490-0.355302.522901.48360K562NELFE
SUPT20HENSG00000102710.15568.451301130.82370-0.9923014.7072012.82130K562TARDBP
SUPT20HENSG00000102710.15812.796101007.80280-0.310202.439901.68610K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SUPT20H is not available on ENCORE database.





38 RBPs can affect the splicing of SUPT20H :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESUPT20HENSG00000102710.15chr13-3758468837584792375836303758394637586328375864340.260000.000080.01224includedHepG2G3BP1
SESUPT20HENSG00000102710.15chr13-3758468837584792375834483758394637586328375864340.178000.002680.04619includedK562SRSF1
SESUPT20HENSG00000102710.15chr13-375994563759957437598476375985793760034037600373-0.092000.000320.06361excludedK562FTO
SESUPT20HENSG00000102710.15chr13-375994563759957437598476375985793760034037600373-0.141000.000010.00038excludedHepG2U2AF1
SESUPT20HENSG00000102710.15chr13-376193833761951037618214376183183762167137621738-0.200000.000740.01588excludedHepG2U2AF1
SESUPT20HENSG00000102710.15chr13-375955843759573937593478375935343759614737596217-0.325000.000000.00000excludedHepG2U2AF1
SESUPT20HENSG00000102710.15chr13-375994563759957437598476375985793760034037600373-0.083000.000250.01059excludedK562AKAP8L
SESUPT20HENSG00000102710.15chr13-3762148237621545376193833761951037621671376217380.150000.000210.05198includedHepG2DKC1
SESUPT20HENSG00000102710.15chr13-375994563759957437598476375985793760034037600373-0.064000.000410.08558excludedK562WDR43
SESUPT20HENSG00000102710.15chr13-3758468837584792375836303758394637586328375864340.270000.000060.00821includedHepG2QKI
SESUPT20HENSG00000102710.15chr13-375984763759857937598171375983303759945637599574-0.066000.001010.01430excludedHepG2U2AF2
SESUPT20HENSG00000102710.15chr13-375955843759573937593478375935343759614737596217-0.167000.000000.00000excludedHepG2U2AF2
SESUPT20HENSG00000102710.15chr13-376009263760097837599966376003733760228437602442-0.058000.005990.05398excludedK562AQR
SESUPT20HENSG00000102710.15chr13-375846883758479237583630375839463758632837586434-0.152000.000130.01761excludedHepG2SRSF7
SESUPT20HENSG00000102710.15chr13-375994563759957437598476375985793760034037600373-0.204000.000000.00000excludedK562PUS1
SESUPT20HENSG00000102710.15chr13-3762270037622736376220143762207337625624376257200.428000.000410.09487includedHepG2EFTUD2
SESUPT20HENSG00000102710.15chr13-375994563759957437598476375985793760034037600373-0.091000.000010.00297excludedK562NSUN2
SESUPT20HENSG00000102710.15chr13-3758468837584792375836303758394637586328375864340.520000.000000.00000includedHepG2PTBP1
SESUPT20HENSG00000102710.15chr13-3758468837584792375836303758394637586328375864340.454000.000000.00000includedHepG2MATR3
SESUPT20HENSG00000102710.15chr13-376075853760772537605875376060323761454137614595-0.113000.000080.00275excludedK562U2AF1
SESUPT20HENSG00000102710.15chr13-3758468837584792375836303758394637586328375864340.285000.000030.00136includedHepG2SRSF1
SESUPT20HENSG00000102710.15chr13-3762270037622736376220143762207337625624376257200.396000.000250.02499includedHepG2IGF2BP3
SESUPT20HENSG00000102710.15chr13-3758468837584792375836303758394637586328375864340.093000.001890.09941includedK562HNRNPUL1
SESUPT20HENSG00000102710.15chr13-3758468837584792375836303758394637586328375864340.283000.000170.01138includedHepG2SF3B4
SESUPT20HENSG00000102710.15chr13-375994563759957437598476375985793760034037600373-0.103000.000010.00084excludedK562UTP18
SESUPT20HENSG00000102710.15chr13-3758468837584792375836303758394637586328375864340.223000.000790.07521includedHepG2TAF15
SESUPT20HENSG00000102710.15chr13-375984763759857937598171375983303759945637599574-0.067000.002860.04647excludedK562U2AF2
SESUPT20HENSG00000102710.15chr13-3758468837584792375836303758394637586328375864340.215000.000060.00376includedK562HNRNPU
SESUPT20HENSG00000102710.15chr13-375994563759957437598476375985793760034037600373-0.086000.000190.00722excludedK562RBM15
SESUPT20HENSG00000102710.15chr13-375913813759146537586328375864343759347837593534-0.087000.001570.03839excludedK562RBM15
SESUPT20HENSG00000102710.15chr13-375994563759957437598476375985793760034037600373-0.112000.000000.00023excludedK562AGGF1
SESUPT20HENSG00000102710.15chr13-376227003762273637622014376220733762562437625720-0.326000.000710.03480excludedK562HNRNPK
SESUPT20HENSG00000102710.15chr13-375846883758479237583630375839463758632837586434-0.192000.000130.00752excludedHepG2HNRNPC
SESUPT20HENSG00000102710.15chr13-3758468837584792375836303758394637586328375864340.504000.000000.00001includedK562PTBP1
SESUPT20HENSG00000102710.15chr13-375846883758479237583630375839463758632837586434-0.156000.000000.00001excludedK562HNRNPC
A3SSSUPT20HENSG00000102710.15chr13-3759614737597181375961473759645437598171375982620.422000.000370.05938longerK562RBM22
A3SSSUPT20HENSG00000102710.15chr13-3759614737597181375961473759645437598171375982620.412000.000170.04245longerHepG2MATR3
A3SSSUPT20HENSG00000102710.15chr13-3759614737597181375961473759645437598171375983300.409000.000040.03044longerHepG2SUPV3L1
A3SSSUPT20HENSG00000102710.15chr13-3759614737596454375961473759621737598171375983300.497000.000000.00008longerK562U2AF2
A3SSSUPT20HENSG00000102710.15chr13-3759614737596454375961473759621737598171375983300.484000.000000.00072longerK562SF3B4
A3SSSUPT20HENSG00000102710.15chr13-3759138137591501375913813759146537593478375935340.251000.000190.00662longerHepG2U2AF2
A3SSSUPT20HENSG00000102710.15chr13-375961473759718137596147375964543759817137598307-0.408000.000000.00000shorterHepG2U2AF2
A3SSSUPT20HENSG00000102710.15chr13-375961473759645437596147375962173759817137598262-0.323000.000000.00104shorterK562HNRNPUL1
A3SSSUPT20HENSG00000102710.15chr13-3759614737597181375961473759645437598171375982620.410000.000010.02142longerHepG2HLTF
A3SSSUPT20HENSG00000102710.15chr13-375961473759718137596147375964543759817137598354-0.117000.000050.03851shorterK562SBDS
A3SSSUPT20HENSG00000102710.15chr13-3759614737597181375961473759645437598171375983820.246000.001880.01217longerK562AQR
A3SSSUPT20HENSG00000102710.15chr13-3760570337605782376057033760576037605875376061100.066000.007200.03979longerK562AQR
A3SSSUPT20HENSG00000102710.15chr13-3758632837586486375863283758643437591381375915010.082000.000060.00057longerK562AQR
A3SSSUPT20HENSG00000102710.15chr13-3759614737597181375961473759645437598171375982620.438000.000000.00011longerHepG2PCBP2
A3SSSUPT20HENSG00000102710.15chr13-3759614737596454375961473759621737598171375982620.074000.000020.00585longerK562SF3B1
A3SSSUPT20HENSG00000102710.15chr13-3759614737597181375961473759621737598171375983300.377000.000140.06457longerHepG2FUBP3
A3SSSUPT20HENSG00000102710.15chr13-3759614737596454375961473759621737598171375983300.178000.000390.01826longerHepG2U2AF1
A3SSSUPT20HENSG00000102710.15chr13-375961473759718137596147375964543759817137598330-0.144000.002000.07111shorterHepG2U2AF1
A3SSSUPT20HENSG00000102710.15chr13-3759614737597181375961473759645437598171375983300.353000.000000.00227longerHepG2SSB
A3SSSUPT20HENSG00000102710.15chr13-3759614737597181375961473759645437598171375983300.484000.000000.00270longerHepG2PRPF8
A3SSSUPT20HENSG00000102710.15chr13-3759614737597181375961473759645437598171375982620.449000.000040.02232longerHepG2G3BP1
A3SSSUPT20HENSG00000102710.15chr13-3759614737597181375961473759645437598171375982620.353000.000610.05360longerK562SRSF1
A3SSSUPT20HENSG00000102710.15chr13-375961473759645437596147375962173759817137598262-0.296000.000360.03603shorterK562SRSF1
A3SSSUPT20HENSG00000102710.15chr13-3759614737597181375961473759645437598171375983300.399000.000000.00000longerK562HNRNPC
A3SSSUPT20HENSG00000102710.15chr13-3759614737597181375961473759645437598171375983300.358000.000000.00000longerHepG2TBRG4
A3SSSUPT20HENSG00000102710.15chr13-375913813759150137591381375914653759347837593534-0.126000.000040.02521shorterHepG2TBRG4
A3SSSUPT20HENSG00000102710.15chr13-3759614737597181375961473759621737598171375982620.412000.000120.02142longerK562PRPF8
MXESUPT20HENSG00000102710.15chr13-3759817137598330375984763759857937596147375964543759945637599574-0.267000.000000.000002includedHepG2U2AF1
MXESUPT20HENSG00000102710.15chr13-3759817137598330375984763759857937596147375964543759945637599574-0.104000.006080.081542includedHepG2FTO
MXESUPT20HENSG00000102710.15chr13-37595584375956683759614737596217375934783759353437598171375983300.102000.006210.063381includedK562DROSHA
MXESUPT20HENSG00000102710.15chr13-37595584375957393759614737597181375934783759353437598171375983300.070000.000700.028001includedK562AGGF1
MXESUPT20HENSG00000102710.15chr13-37595584375956683759614737596454375934783759353437598171375983300.135000.000270.018401includedK562SF3B1
MXESUPT20HENSG00000102710.15chr13-3759817137598262375984763759857937596359375964543759945637599574-0.165000.000130.010102includedK562SF3B1
MXESUPT20HENSG00000102710.15chr13-3759817137598330375984763759857937596147375964543759945637599574-0.166000.000120.009592includedK562SF3B1
MXESUPT20HENSG00000102710.15chr13-37598171375983303759847637598579375961473759645437599456375995740.153000.000180.052011includedK562UTP3
MXESUPT20HENSG00000102710.15chr13-37586328375864343759138137591465375836303758394637593478375935340.141000.000930.056531includedHepG2TBRG4
MXESUPT20HENSG00000102710.15chr13-3759558437595668375961473759645437593478375935343759817137598330-0.288000.000330.015402includedHepG2SUPV3L1
MXESUPT20HENSG00000102710.15chr13-37595584375956683759614737597181375934783759353437598171375983300.419000.000130.004771includedK562PRPF8
MXESUPT20HENSG00000102710.15chr13-37595584375956683759614737596217375934783759353437598171375983300.195000.000000.000121includedK562HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SUPT20H is not avaliable on ENCORE database.