RP11-98O2.1

General Information

Gene Name : RP11-98O2.1
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP11-98O2.1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP11-98O2.1 is not avaliable on ENCORE database.

Proteins bound to RNA

RP11-98O2.1 RNA is bound by 1 proteins.

eCLIP assay for RP11-98O2.1 is not avaliable on ENCORE database.

1 proteins are bound to RP11-98O2.1 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr4	139718853	139718933	+	intron-Distal	4.44671	3.94682	K562	EIF4G2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RP11-98O2.1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RP11-98O2.1 is not available on ENCORE database.
60 RBPs can affect the levels of RP11-98O2.1.

The Knockdown/knockout RNA-Seq assay for RP11-98O2.1 is not available on ENCORE database.

60 RBPs can affect the gene expression of RP11-98O2.1 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RP11-98O2.1	ENSG00000250501.2	292.20060	705.72900	-1.27220	6.12000	5.32740	K562	AGGF1
RP11-98O2.1	ENSG00000250501.2	480.07650	775.33810	-0.69160	2.54620	1.61020	K562	AKAP8
RP11-98O2.1	ENSG00000250501.2	376.99380	734.30580	-0.96180	4.24620	3.43340	K562	AKAP8L
RP11-98O2.1	ENSG00000250501.2	83.57200	486.80780	-2.54230	12.85880	11.72760	K562	AQR
RP11-98O2.1	ENSG00000250501.2	507.61570	770.39310	-0.60190	2.40620	1.55960	K562	ATP5C1
RP11-98O2.1	ENSG00000250501.2	81.56450	211.40040	-1.37400	10.37350	8.22780	K562	DDX3X
RP11-98O2.1	ENSG00000250501.2	386.37700	539.08340	-0.48050	4.12810	3.35340	K562	DDX47
RP11-98O2.1	ENSG00000250501.2	151.49010	234.25210	-0.62880	3.03850	1.64220	K562	DHX30
RP11-98O2.1	ENSG00000250501.2	511.04640	790.39920	-0.62910	2.54870	1.71240	K562	DKC1
RP11-98O2.1	ENSG00000250501.2	141.02270	225.03810	-0.67420	3.30240	1.82990	K562	DNAJC21
RP11-98O2.1	ENSG00000250501.2	123.16600	212.86610	-0.78930	2.92320	1.88690	K562	EIF3A
RP11-98O2.1	ENSG00000250501.2	202.87020	321.26910	-0.66320	4.66710	3.64500	K562	EIF3G
RP11-98O2.1	ENSG00000250501.2	147.11580	220.84840	-0.58610	2.79010	1.96500	K562	EIF4A3
RP11-98O2.1	ENSG00000250501.2	371.83320	602.63030	-0.69660	7.93910	6.36430	K562	EIF4G2
RP11-98O2.1	ENSG00000250501.2	200.49280	374.05320	-0.89970	6.96350	5.58050	K562	FMR1
RP11-98O2.1	ENSG00000250501.2	172.50650	317.03070	-0.87800	5.79180	4.41530	K562	FTO
RP11-98O2.1	ENSG00000250501.2	398.69220	229.67080	0.79560	7.11040	6.20190	K562	FXR1
RP11-98O2.1	ENSG00000250501.2	218.45060	337.07600	-0.62580	4.06240	2.29480	K562	G3BP1
RP11-98O2.1	ENSG00000250501.2	226.60380	351.43350	-0.63310	4.55520	3.09610	K562	GLRX3
RP11-98O2.1	ENSG00000250501.2	188.06030	351.03560	-0.90040	6.86510	5.61400	K562	GPKOW
RP11-98O2.1	ENSG00000250501.2	200.41480	409.28750	-1.03010	4.73990	3.75150	K562	GRSF1
RP11-98O2.1	ENSG00000250501.2	203.59470	320.47880	-0.65450	4.29640	2.96000	K562	HNRNPA1
RP11-98O2.1	ENSG00000250501.2	299.58180	531.33510	-0.82670	3.77600	2.27700	K562	HNRNPA2B1
RP11-98O2.1	ENSG00000250501.2	205.87250	278.94660	-0.43820	1.81080	1.31530	K562	HNRNPC
RP11-98O2.1	ENSG00000250501.2	239.52390	354.92050	-0.56730	3.88620	2.82230	K562	HNRNPU
RP11-98O2.1	ENSG00000250501.2	623.65010	485.73740	0.36050	2.04040	1.35270	K562	HSPD1
RP11-98O2.1	ENSG00000250501.2	180.30870	352.58260	-0.96750	6.52390	4.66640	K562	IGF2BP2
RP11-98O2.1	ENSG00000250501.2	205.44770	358.61780	-0.80370	6.51660	4.56710	K562	IGF2BP3
RP11-98O2.1	ENSG00000250501.2	129.24680	218.61580	-0.75830	3.86770	2.09600	K562	ILF3
RP11-98O2.1	ENSG00000250501.2	413.17620	779.41250	-0.91560	3.89810	2.89640	K562	KIF1C
RP11-98O2.1	ENSG00000250501.2	170.47380	299.70790	-0.81400	4.07120	2.92070	K562	KRR1
RP11-98O2.1	ENSG00000250501.2	475.19320	269.99060	0.81550	7.49250	5.08210	K562	LARP7
RP11-98O2.1	ENSG00000250501.2	229.81200	369.78020	-0.68620	5.26920	3.94080	K562	MATR3
RP11-98O2.1	ENSG00000250501.2	445.83240	873.12060	-0.96970	4.01540	2.88560	K562	MBNL1
RP11-98O2.1	ENSG00000250501.2	181.34030	369.48970	-1.02680	10.78750	9.30260	K562	MTPAP
RP11-98O2.1	ENSG00000250501.2	342.39620	611.98290	-0.83780	3.19660	2.23420	K562	NAA15
RP11-98O2.1	ENSG00000250501.2	100.87290	220.54790	-1.12860	7.64720	5.63180	K562	NCBP2
RP11-98O2.1	ENSG00000250501.2	199.77510	464.67720	-1.21790	6.68030	4.94110	K562	PABPN1
RP11-98O2.1	ENSG00000250501.2	464.78910	685.24160	-0.56000	5.51900	4.14440	K562	PUM2
RP11-98O2.1	ENSG00000250501.2	413.81770	728.49630	-0.81590	2.87720	2.32590	K562	PUS1
RP11-98O2.1	ENSG00000250501.2	120.58890	223.19380	-0.88820	3.84600	1.55410	K562	RBFOX2
RP11-98O2.1	ENSG00000250501.2	349.17590	709.58910	-1.02300	4.60300	3.85740	K562	RBM15
RP11-98O2.1	ENSG00000250501.2	237.63230	345.18680	-0.53860	3.17870	2.27170	K562	RBM22
RP11-98O2.1	ENSG00000250501.2	314.61730	228.11690	0.46370	2.27360	1.37910	K562	RCC2
RP11-98O2.1	ENSG00000250501.2	271.80850	489.62400	-0.84910	3.77310	1.63260	K562	SAFB2
RP11-98O2.1	ENSG00000250501.2	184.05790	265.74930	-0.52990	2.46470	1.44680	K562	SAFB
RP11-98O2.1	ENSG00000250501.2	163.09790	424.90700	-1.38140	5.39010	3.53260	K562	SF1
RP11-98O2.1	ENSG00000250501.2	287.30120	405.10370	-0.49570	3.55920	2.64210	K562	SF3A3
RP11-98O2.1	ENSG00000250501.2	191.91050	333.80180	-0.79860	4.59880	3.32640	K562	SF3B1
RP11-98O2.1	ENSG00000250501.2	120.30210	258.78050	-1.10510	2.66880	1.83040	K562	SF3B4
RP11-98O2.1	ENSG00000250501.2	321.59740	517.93280	-0.68750	2.58240	1.34240	K562	SFPQ
RP11-98O2.1	ENSG00000250501.2	210.63800	352.92040	-0.74460	5.38920	4.40920	K562	SRSF1
RP11-98O2.1	ENSG00000250501.2	238.81460	331.38680	-0.47260	2.83770	1.54170	K562	SSB
RP11-98O2.1	ENSG00000250501.2	326.01920	583.74130	-0.84040	3.75650	1.98940	K562	SUPT6H
RP11-98O2.1	ENSG00000250501.2	292.51840	187.97770	0.63790	3.12860	2.04770	K562	SUPV3L1
RP11-98O2.1	ENSG00000250501.2	204.53600	338.10180	-0.72510	4.73080	3.23140	K562	TRA2A
RP11-98O2.1	ENSG00000250501.2	752.49270	435.28250	0.78960	12.27530	10.89700	K562	UPF1
RP11-98O2.1	ENSG00000250501.2	229.06770	340.17690	-0.57050	3.68510	1.75090	K562	UPF2
RP11-98O2.1	ENSG00000250501.2	390.34890	738.34980	-0.91950	3.17930	1.76020	K562	UTP18
RP11-98O2.1	ENSG00000250501.2	317.71460	202.58490	0.64910	3.66190	2.20000	K562	XRN2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RP11-98O2.1 is not available on ENCORE database.

8 RBPs can affect the splicing of RP11-98O2.1 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	RP11-98O2.1	ENSG00000250501.2	chr4	+	139716212	139716368			139694741	139694847	139722071	139722483	0.23400	0.00000	0.00007	included	K562	SRSF1
SE	RP11-98O2.1	ENSG00000250501.2	chr4	+	139716212	139716368			139694741	139694847	139722071	139722483	0.18500	0.00048	0.07103	included	K562	MATR3
SE	RP11-98O2.1	ENSG00000250501.2	chr4	+	139711543	139711616			139694741	139694847	139716212	139716368	0.16100	0.00001	0.00108	included	K562	EFTUD2
SE	RP11-98O2.1	ENSG00000250501.2	chr4	+	139716212	139716368			139694741	139694847	139721217	139721382	-0.22400	0.00003	0.00360	excluded	K562	EFTUD2
SE	RP11-98O2.1	ENSG00000250501.2	chr4	+	139716212	139716368			139694741	139694847	139722071	139722483	0.16400	0.00091	0.01836	included	K562	U2AF2
SE	RP11-98O2.1	ENSG00000250501.2	chr4	+	139711543	139711616			139694741	139694847	139716212	139716368	-0.05400	0.00031	0.00754	excluded	K562	U2AF2
SE	RP11-98O2.1	ENSG00000250501.2	chr4	+	139721217	139721261			139716212	139716368	139722071	139722483	0.20600	0.00115	0.04204	included	K562	TARDBP
SE	RP11-98O2.1	ENSG00000250501.2	chr4	+	139716212	139716368			139694741	139694847	139722071	139722483	-0.25800	0.00301	0.08651	excluded	K562	HNRNPU
SE	RP11-98O2.1	ENSG00000250501.2	chr4	+	139711543	139711616			139694741	139694847	139716212	139716368	0.10100	0.00011	0.00718	included	K562	PTBP1
MXE	RP11-98O2.1	ENSG00000250501.2	chr4	+	139695819	139695927	139721217	139721261	139694741	139694847	139722071	139722483	0.45600	0.00008	0.00494	1included	K562	PTBP1
MXE	RP11-98O2.1	ENSG00000250501.2	chr4	+	139695819	139695927	139716212	139716368	139694741	139694847	139722071	139722483	0.08500	0.00010	0.00589	1included	K562	PTBP1
MXE	RP11-98O2.1	ENSG00000250501.2	chr4	+	139711543	139711616	139721217	139721261	139694741	139694847	139722071	139722483	0.31500	0.00195	0.05422	1included	K562	PTBP1
MXE	RP11-98O2.1	ENSG00000250501.2	chr4	+	139716212	139716368	139721217	139721261	139694741	139694847	139722071	139722483	-0.14300	0.00130	0.03256	2included	K562	TARDBP
MXE	RP11-98O2.1	ENSG00000250501.2	chr4	+	139716212	139716368	139721217	139721309	139694741	139694847	139722071	139722483	-0.06300	0.00218	0.04898	2included	K562	TARDBP
MXE	RP11-98O2.1	ENSG00000250501.2	chr4	+	139711543	139711616	139716212	139716368	139694741	139694847	139721217	139721261	0.13200	0.00138	0.04145	1included	K562	EFTUD2
MXE	RP11-98O2.1	ENSG00000250501.2	chr4	+	139711543	139711616	139716212	139716368	139694741	139694847	139722071	139722483	0.14400	0.00114	0.03564	1included	K562	EFTUD2
MXE	RP11-98O2.1	ENSG00000250501.2	chr4	+	139716212	139716368	139721217	139721382	139694741	139694847	139722071	139722483	-0.14200	0.00002	0.00149	2included	K562	EFTUD2
MXE	RP11-98O2.1	ENSG00000250501.2	chr4	+	139695819	139695927	139716212	139716368	139694741	139694847	139722071	139722483	0.11000	0.00044	0.02751	1included	K562	SAFB

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP11-98O2.1

General Information

Functions

Localization

Domains (AlphaFold: RP11-98O2.1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP11-98O2.1 is not avaliable on ENCORE database.

1 proteins are bound to RP11-98O2.1 RNA:

eCLIP assay for RP11-98O2.1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP11-98O2.1 is not available on ENCORE database.

60 RBPs can affect the gene expression of RP11-98O2.1 :

The Knockdown/knockout RNA-Seq assay for RP11-98O2.1 is not available on ENCORE database.

8 RBPs can affect the splicing of RP11-98O2.1 :

The Knockdown/knockout RNA-Seq assay for RP11-98O2.1 is not avaliable on ENCORE database.