RP11-98O2.1

General Information

Gene Name : RP11-98O2.1
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP11-98O2.1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP11-98O2.1 is not avaliable on ENCORE database.

Proteins bound to RNA

RP11-98O2.1 RNA is bound by 1 proteins.

CanvasJS.com

eCLIP assay for RP11-98O2.1 is not avaliable on ENCORE database.

1 proteins are bound to RP11-98O2.1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr4	139718853	139718933	+	intron-Distal	4.44671	3.94682	K562	EIF4G2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 1 of 1 entries

eCLIP assay for RP11-98O2.1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RP11-98O2.1 is not available on ENCORE database.
60 RBPs can affect the levels of RP11-98O2.1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for RP11-98O2.1 is not available on ENCORE database.

60 RBPs can affect the gene expression of RP11-98O2.1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RP11-98O2.1	ENSG00000250501.2	83.57200	486.80780	-2.54230	12.85880	11.72760	K562	AQR
RP11-98O2.1	ENSG00000250501.2	752.49270	435.28250	0.78960	12.27530	10.89700	K562	UPF1
RP11-98O2.1	ENSG00000250501.2	181.34030	369.48970	-1.02680	10.78750	9.30260	K562	MTPAP
RP11-98O2.1	ENSG00000250501.2	81.56450	211.40040	-1.37400	10.37350	8.22780	K562	DDX3X
RP11-98O2.1	ENSG00000250501.2	371.83320	602.63030	-0.69660	7.93910	6.36430	K562	EIF4G2
RP11-98O2.1	ENSG00000250501.2	398.69220	229.67080	0.79560	7.11040	6.20190	K562	FXR1
RP11-98O2.1	ENSG00000250501.2	100.87290	220.54790	-1.12860	7.64720	5.63180	K562	NCBP2
RP11-98O2.1	ENSG00000250501.2	188.06030	351.03560	-0.90040	6.86510	5.61400	K562	GPKOW
RP11-98O2.1	ENSG00000250501.2	200.49280	374.05320	-0.89970	6.96350	5.58050	K562	FMR1
RP11-98O2.1	ENSG00000250501.2	292.20060	705.72900	-1.27220	6.12000	5.32740	K562	AGGF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 60 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RP11-98O2.1 is not available on ENCORE database.

8 RBPs can affect the splicing of RP11-98O2.1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	RP11-98O2.1	ENSG00000250501.2	chr4	+	139716212	139716368			139694741	139694847	139722071	139722483	0.23400	0.00000	0.00007	included	K562	SRSF1
SE	RP11-98O2.1	ENSG00000250501.2	chr4	+	139711543	139711616			139694741	139694847	139716212	139716368	0.16100	0.00001	0.00108	included	K562	EFTUD2
MXE	RP11-98O2.1	ENSG00000250501.2	chr4	+	139716212	139716368	139721217	139721382	139694741	139694847	139722071	139722483	-0.14200	0.00002	0.00149	2included	K562	EFTUD2
SE	RP11-98O2.1	ENSG00000250501.2	chr4	+	139716212	139716368			139694741	139694847	139721217	139721382	-0.22400	0.00003	0.00360	excluded	K562	EFTUD2
MXE	RP11-98O2.1	ENSG00000250501.2	chr4	+	139695819	139695927	139721217	139721261	139694741	139694847	139722071	139722483	0.45600	0.00008	0.00494	1included	K562	PTBP1
MXE	RP11-98O2.1	ENSG00000250501.2	chr4	+	139695819	139695927	139716212	139716368	139694741	139694847	139722071	139722483	0.08500	0.00010	0.00589	1included	K562	PTBP1
SE	RP11-98O2.1	ENSG00000250501.2	chr4	+	139711543	139711616			139694741	139694847	139716212	139716368	0.10100	0.00011	0.00718	included	K562	PTBP1
SE	RP11-98O2.1	ENSG00000250501.2	chr4	+	139711543	139711616			139694741	139694847	139716212	139716368	-0.05400	0.00031	0.00754	excluded	K562	U2AF2
MXE	RP11-98O2.1	ENSG00000250501.2	chr4	+	139695819	139695927	139716212	139716368	139694741	139694847	139722071	139722483	0.11000	0.00044	0.02751	1included	K562	SAFB
SE	RP11-98O2.1	ENSG00000250501.2	chr4	+	139716212	139716368			139694741	139694847	139722071	139722483	0.18500	0.00048	0.07103	included	K562	MATR3

Showing 1 to 10 of 18 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP11-98O2.1

General Information

Functions

Localization

Domains (AlphaFold: RP11-98O2.1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP11-98O2.1 is not avaliable on ENCORE database.

1 proteins are bound to RP11-98O2.1 RNA:

eCLIP assay for RP11-98O2.1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP11-98O2.1 is not available on ENCORE database.

60 RBPs can affect the gene expression of RP11-98O2.1 :

The Knockdown/knockout RNA-Seq assay for RP11-98O2.1 is not available on ENCORE database.

8 RBPs can affect the splicing of RP11-98O2.1 :

The Knockdown/knockout RNA-Seq assay for RP11-98O2.1 is not avaliable on ENCORE database.