RASA3

General Information

Gene Name       : RASA3
Gene ID             : ENSG00000185989.10
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: RASA3)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878RASA3ENSG00000185989.108.6813.4611.07ENCSR000AEF
HepG2RASA3ENSG00000185989.100.040.030.04ENCSR985KAT
K562RASA3ENSG00000185989.1014.2311.6112.92ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RASA3 is not avaliable on ENCORE database.



Proteins bound to RNA

  • RASA3 RNA is bound by 36 proteins.  







eCLIP assay for RASA3 is not avaliable on ENCORE database.





36 proteins are bound to RASA3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr13114784365114784396-3'-UTR,CDS,intron-Distal,intron-Proximal4.963307.31591K562UCHL5
chr13114747595114747653-3'-UTR,intron-Distal5.1109915.12816K562UPF1
chr13114786934114786982-3'-UTR,CDS,intron-Distal4.963306.96356K562UCHL5
chr13114792900114792929-3'-UTR,CDS,intron-Distal3.086453.01994K562BUD13
chr13114747783114747900-3'-UTR,intron-Distal4.1531619.15063K562UPF1
chr13114786977114786985-3'-UTR,CDS,intron-Distal,intron-Proximal4.689483.86495K562DDX24
chr13114747666114747728-3'-UTR,intron-Distal4.7677616.69583K562UPF1
chr13114747728114747783-3'-UTR,intron-Distal4.9853312.17194K562UPF1
chr13114792856114792872-3'-UTR,CDS,intron-Distal,intron-Proximal3.356867.41728K562PRPF8
chr13114789755114789832-3'-UTR,CDS,intron-Distal,intron-Proximal5.4765712.19740K562DDX24
chr13114786880114786928-3'-UTR,CDS,intron-Distal3.829536.80284K562DDX24
chr13114792847114792872-3'-UTR,CDS,intron-Distal,intron-Proximal3.881555.57819K562UCHL5
chr13114786877114786930-3'-UTR,CDS,intron-Distal,intron-Proximal4.5024710.38007K562UCHL5
chr13114748279114748350-3'-UTR,intron-Distal,intron-Proximal5.1187912.56575K562UPF1
chr13114792863114792872-3'-UTR,CDS,intron-Distal,intron-Proximal3.897005.20093K562DDX24
chr13114747933114747978-3'-UTR,intron-Distal3.239895.78757K562UPF1
chr13114786881114786950-3'-UTR,CDS,intron-Distal3.464368.21285K562ZNF622
chr13114748462114748530-3'-UTR,intron-Distal3.969619.74385K562UPF1
chr13114747497114747595-3'-UTR,intron-Distal5.5843720.53732K562UPF1
chr13114748293114748345-3'-UTR,intron-Distal,intron-Proximal4.803575.00858K562AKAP1
chr13114789754114789770-3'-UTR,CDS,intron-Distal,intron-Proximal4.059623.71613K562UCHL5
chr13114762141114762210-CDS,intron-Distal3.717533.25175K562YBX3
chr13114756364114756403-intron-Distal3.998543.80512K562CSTF2T
chr13114891268114891336-intron-Distal4.663613.11728K562FAM120A
chr13114755549114755616-intron-Distal4.373783.76991K562TBRG4
chr13114762987114763093-intron-Distal5.3657011.20102K562HNRNPK
chr13114797907114797955-intron-Distal4.280773.30336K562EWSR1
chr13114764775114764847-intron-Distal3.165253.25653K562CSTF2T
chr13114764772114764835-intron-Distal4.462894.23759K562NONO
chr13114751821114751872-intron-Distal3.998474.89657K562EIF4G2
chr13114879615114879697-intron-Distal3.273693.12654K562SLTM
chr13114804621114804695-intron-Distal4.655984.53722K562SLTM
chr13114764109114764168-intron-Distal3.480973.41462K562EWSR1
chr13114753307114753354-intron-Distal4.295123.54095K562FAM120A
chr13114756516114756564-intron-Distal4.416276.26655K562EIF4G2
chr13114873618114873686-intron-Distal3.665153.79142K562AKAP1
chr13114865049114865094-intron-Distal4.046373.11728K562FAM120A
chr13114890988114891046-intron-Distal4.462054.42197K562EWSR1
chr13114753397114753507-intron-Distal5.3918411.85152K562CSTF2T
chr13114796256114796319-intron-Distal4.601434.70117K562HNRNPL
chr13114868326114868439-intron-Distal4.458126.09610K562EWSR1
chr13114873595114873675-intron-Distal5.573038.23441K562GTF2F1
chr13114891197114891358-intron-Distal5.294909.20003K562SLTM
chr13114868150114868223-intron-Distal4.896437.27892K562EWSR1
chr13114796248114796310-intron-Distal5.3257314.13591K562AGGF1
chr13114777987114778069-intron-Distal5.657218.04355K562EIF4G2
chr13114843659114843668-intron-Distal5.705238.82226HepG2RPS3
chr13114797385114797455-intron-Distal3.788349.93088K562HNRNPL
chr13114870259114870313-intron-Distal4.822634.27047K562AKAP8L
chr13114886132114886176-intron-Distal4.009263.28464K562EWSR1
chr13114870241114870327-intron-Distal3.734497.81398K562EIF4G2
chr13114882981114883033-intron-Distal4.5723414.72184K562AGGF1
chr13114884908114885021-intron-Distal4.722475.55667K562EWSR1
chr13114753403114753465-intron-Distal4.614645.38606K562FAM120A
chr13114763645114763700-intron-Distal3.941753.82910K562NONO
chr13114862394114862467-intron-Distal4.407794.16830K562EWSR1
chr13114820376114820461-intron-Distal3.997476.16837K562AGGF1
chr13114763671114763741-intron-Distal3.348313.40404K562CSTF2T
chr13114757483114757627-intron-Distal5.6314012.90461K562TARDBP
chr13114883418114883467-intron-Distal5.1033414.41437K562AGGF1
chr13114799346114799387-intron-Distal4.369213.02711K562EWSR1
chr13114755528114755642-intron-Distal5.576259.11946K562FAM120A
chr13114796070114796131-intron-Distal4.626876.55010K562HNRNPL
chr13114874803114874854-intron-Distal5.127697.13440K562SLTM
chr13114775938114776035-intron-Distal4.632035.05197K562HNRNPK
chr13114882961114883044-intron-Distal3.777123.39667K562HNRNPL
chr13114896184114896225-intron-Distal3.205993.51700K562EIF4G2
chr13114753285114753352-intron-Distal3.909423.80946K562DDX52
chr13114887851114887926-intron-Distal3.851863.59342K562CSTF2T
chr13114873640114873666-intron-Distal4.677374.09073K562SLTM
chr13114891279114891348-intron-Distal4.508575.80843K562CSTF2T
chr13114876046114876107-intron-Distal4.126493.02711K562EWSR1
chr13114853125114853202-intron-Distal3.976273.28264K562YWHAG
chr13114897107114897194-intron-Distal5.5532114.35031K562EIF4G2
chr13114796131114796199-intron-Distal4.468279.13598K562HNRNPL
chr13114891974114892033-intron-Distal4.089254.04290K562CSTF2T
chr13114896862114896940-intron-Distal3.310893.77567K562NONO
chr13114754582114754639-intron-Distal4.489835.80843K562CSTF2T
chr13114764474114764511-intron-Distal4.102384.33692K562NONO
chr13114855232114855284-intron-Distal4.158393.36882K562SLTM
chr13114763521114763579-intron-Distal4.397165.04359K562HNRNPK
chr13114875176114875202-intron-Distal4.380194.14527K562SLTM
chr13114804589114804656-intron-Distal4.806085.84224K562EWSR1
chr13114888341114888374-intron-Distal3.922673.30336K562EWSR1
chr13114870254114870327-intron-Distal5.685667.93492K562GTF2F1
chr13114882270114882305-intron-Distal5.623119.36197K562AGGF1
chr13114753405114753458-intron-Distal4.7797610.02297K562EIF4G2
chr13114876370114876460-intron-Distal3.437243.15535K562EWSR1
chr13114865054114865102-intron-Distal4.434093.48173K562GTF2F1
chr13114874818114874916-intron-Distal4.536494.14056K562EWSR1
chr13114756986114757076-intron-Distal4.7962713.89937K562EIF4G2
chr13114892397114892472-intron-Distal3.673056.68193K562EWSR1
chr13114886767114886809-intron-Distal3.159043.15535K562EWSR1
chr13114896976114897019-intron-Distal3.355773.89328K562EIF4G2
chr13114753296114753354-intron-Distal4.412855.54639K562CSTF2T
chr13114889352114889384-intron-Distal3.922673.30336K562EWSR1
chr13114892913114893003-intron-Distal3.685433.23171K562FUS
chr13114853146114853198-intron-Distal4.590364.53722K562SLTM
chr13114897120114897327-intron-Distal4.117457.20180K562TARDBP
chr13114866906114866950-intron-Distal3.153723.36199K562EWSR1
chr13114771186114771266-intron-Distal4.409605.40707K562CSTF2T
chr13114755541114755632-intron-Distal5.4563912.17831K562CSTF2T
chr13114797049114797160-intron-Distal4.4881010.27049K562HNRNPL
chr13114884933114885015-intron-Distal4.783875.09502K562SLTM
chr13114766843114766915-intron-Distal4.061603.62737K562HNRNPK
chr13114870223114870324-intron-Distal5.590117.24234K562FAM120A
chr13114873569114873607-intron-Distal4.351334.09073K562SLTM
chr13114796319114796374-intron-Distal4.699066.76436K562HNRNPL
chr13114874403114874446-intron-Distal4.672675.43245K562SLTM
chr13114854475114854584-intron-Distal4.921424.75882K562SLTM
chr13114869879114869927-intron-Distal4.462054.42197K562EWSR1
chr13114767979114768021-intron-Distal3.264933.14895K562NONO
chr13114805445114805533-intron-Distal3.630623.23171K562FUS
chr13114870249114870319-intron-Distal5.215193.11886K562DROSHA
chr13114882934114882981-intron-Distal5.0474112.73293K562AGGF1
chr13114873598114873700-intron-Distal4.580296.36475K562CSTF2T
chr13114873554114873595-intron-Distal3.530413.30889K562GTF2F1
chr13114761940114762007-intron-Distal,intron-Proximal5.535848.34710K562AQR
chr13114892390114892453-intron-Distal4.186683.75920K562SLTM
chr13114764181114764241-intron-Distal4.092634.23094K562TIA1
chr13114770215114770273-intron-Distal3.760126.33374K562TIA1
chr13114796199114796256-intron-Distal3.923555.57983K562HNRNPL
chr13114777745114777866-intron-Distal7.0454528.94469K562EIF4G2
chr13114873568114873653-intron-Distal4.636144.14056K562EWSR1
chr13114891277114891350-intron-Distal5.473728.72707K562EWSR1
chr13114771182114771258-intron-Distal3.353863.57928K562GTF2F1
chr13114757326114757483-intron-Distal5.6934515.08356K562TARDBP
chr13114757425114757475-intron-Distal5.660549.50986K562EIF4G2
chr13114891967114892034-intron-Distal3.820014.20405K562EWSR1
chr13114810062114810152-intron-Distal4.668235.63094K562GTF2F1
chr13114882305114882401-intron-Distal5.2673926.45582K562AGGF1
chr13114792822114792856-intron-Distal,intron-Proximal5.6769111.40920K562PRPF8
chr13114778823114778925-intron-Distal,intron-Proximal5.227076.03057K562EFTUD2
chr13114771181114771254-intron-Distal4.211573.56427K562FAM120A
chr13114799591114799662-intron-Distal3.997423.36882K562SLTM
chr13114776118114776195-intron-Distal4.365105.04359K562HNRNPK
chr13114879014114879099-intron-Distal4.573255.27179K562EWSR1
chr13114843658114843667-intron-Distal4.4641533.52037HepG2DDX3X
chr13114775660114775727-intron-Distal3.891333.34601K562HNRNPK
chr13114846505114846602-intron-Distal5.927526.73488K562AATF
chr13114751785114751868-intron-Distal4.909423.20137K562DDX52
chr13114778120114778168-intron-Distal5.183446.00625K562EIF4G2
chr13114753544114753617-intron-Distal4.577715.60464K562CSTF2T
chr13114870243114870336-intron-Distal4.737126.64314K562CSTF2T
chr13114868669114868716-intron-Distal4.606815.55667K562EWSR1
chr13114871077114871113-intron-Distal4.128943.42967K562SLTM
chr13114753524114753599-intron-Distal6.3563312.95876K562EIF4G2
chr13114753458114753506-intron-Distal5.8779610.00047K562EIF4G2
chr13114892393114892516-intron-Distal3.393165.26318K562FUS
chr13114887212114887250-intron-Distal4.009263.02711K562EWSR1
chr13114766940114767000-intron-Distal3.576273.30139K562DHX30
chr13114770565114770625-intron-Distal4.009263.28464K562EWSR1
chr13114882161114882227-intron-Distal5.9861114.76922K562AGGF1
chr13114755544114755641-intron-Distal5.7126629.87460K562EIF4G2
chr13114887956114888018-intron-Distal4.258013.28464K562EWSR1
chr13114767910114767960-intron-Distal4.221463.99137K562NONO
chr13114870256114870311-intron-Distal3.902753.57432K562NONO
chr13114757217114757279-intron-Distal5.705649.50986K562EIF4G2
chr13114764115114764214-intron-Distal3.097965.20317K562NONO
chr13114883076114883122-intron-Distal6.1808916.13026K562AGGF1
chr13114868177114868227-intron-Distal4.141343.60290K562AKAP8L
chr13114873427114873516-intron-Distal4.630829.58295K562SLTM
chr13114889475114889549-intron-Distal3.871303.84914K562SLTM
chr13114770678114770729-intron-Distal3.889103.24367K562DDX52
chr13114796795114796912-intron-Distal4.9186419.37264K562AGGF1
chr13114799620114799692-intron-Distal3.577723.67595K562EWSR1
chr13114881990114882014-intron-Distal4.907186.53047K562AGGF1
chr13114891276114891356-intron-Distal4.691385.24810K562GTF2F1
chr13114897525114897616-intron-Distal5.9622010.49187K562EIF4G2
chr13114869982114870031-intron-Distal4.276273.86024K562EWSR1
chr13114763615114763696-intron-Distal3.972483.84029K562DROSHA
chr13114775644114775723-intron-Distal3.261573.84340K562CSTF2T
chr13114766902114766987-intron-Distal3.400244.20405K562EWSR1
chr13114843668114843686-intron-Distal5.705238.82226HepG2RPS3
chr13114873432114873504-intron-Distal3.283013.93602K562EWSR1
chr13114756980114757057-intron-Distal4.541054.01524K562FAM120A
chr13114805699114805769-intron-Distal4.553455.57532K562HNRNPM
chr13114809253114809316-intron-Distal4.403633.77360K562GTF2F1
chr13114805461114805531-intron-Distal3.677373.12654K562SLTM
chr13114796109114796198-intron-Distal5.4619923.95466K562AGGF1
chr13114775640114775692-intron-Distal5.152425.17878K562DROSHA
chr13114891746114891805-intron-Distal4.550494.42197K562EWSR1
chr13114874870114874915-intron-Distal3.966725.08142K562SLTM
chr13114796705114796739-intron-Distal6.4037917.08587K562AGGF1
chr13114798155114798232-intron-Distal4.437243.86024K562EWSR1
chr13114798065114798155-intron-Distal4.661693.30336K562EWSR1
chr13114863523114863582-intron-Distal4.400244.98766K562EWSR1
chr13114889479114889544-intron-Distal3.492753.15535K562EWSR1
chr13114756369114756410-intron-Distal4.408466.72905K562EIF4G2
chr13114753820114753868-intron-Distal4.308134.94603K562CSTF2T
chr13114864941114865032-intron-Distal3.538064.81215K562EWSR1
chr13114897471114897507-intron-Distal4.572253.72755K562EIF4G2
chr13114749276114749416-intron-Distal4.237343.85148K562GTF2F1
chr13114864787114864850-intron-Distal3.870683.57432K562NONO
chr13114873574114873663-intron-Distal6.2929810.54637K562DDX51
chr13114863668114863722-intron-Distal4.681244.14056K562EWSR1
chr13114870253114870333-intron-Distal4.989875.77100K562SLTM
chr13114777885114777959-intron-Distal6.1775114.44525K562EIF4G2
chr13114843658114843685-intron-Distal5.256496.00748HepG2NOL12
chr13114883401114883464-intron-Distal3.984643.59673K562HNRNPL
chr13114870230114870350-intron-Distal5.696197.56775K562EWSR1
chr13114789833114789915-intron-Distal,intron-Proximal4.432057.33504K562SF3B4
chr13114797995114798044-intron-Distal4.142953.30336K562EWSR1
chr13114770407114770487-intron-Distal4.410545.40320K562NONO
chr13114766416114766469-intron-Distal,intron-Proximal4.598648.54916K562SF3B4
chr13114876047114876104-intron-Distal4.727145.32699K562SLTM
chr13114764274114764340-intron-Distal3.168003.80158K562NONO
chr13114751305114751376-intron-Distal,intron-Proximal4.211804.75311K562CSTF2T
chr13114752007114752076-intron-Distal4.279766.26655K562EIF4G2
chr13114865050114865107-intron-Distal5.007673.11886K562DROSHA
chr13114883033114883076-intron-Distal5.2466912.73293K562AGGF1
chr13114892378114892457-intron-Distal4.377963.94682K562EIF4G2
chr13114843667114843685-intron-Distal4.4641533.52037HepG2DDX3X
chr13114805428114805494-intron-Distal4.465533.86024K562EWSR1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RASA3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RASA3 is not available on ENCORE database.

  • 43 RBPs can affect the levels of RASA3.  








The Knockdown/knockout RNA-Seq assay for RASA3 is not available on ENCORE database.





43 RBPs can affect the gene expression of RASA3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RASA3ENSG00000185989.922.523900.582705.272404.568103.90690HepG2AKAP1
RASA3ENSG00000185989.977.396503.717204.3799011.310109.87620HepG2DDX55
RASA3ENSG00000185989.910.694700.480604.475702.271401.70640HepG2DDX6
RASA3ENSG00000185989.99.849200.460304.419302.167001.63460HepG2EIF2S1
RASA3ENSG00000185989.950.2740010.274102.290702.774102.17250HepG2ETF1
RASA3ENSG00000185989.911.179500.514904.440202.401701.75520HepG2FXR1
RASA3ENSG00000185989.913.414500.517604.695702.799802.16550HepG2MATR3
RASA3ENSG00000185989.99.237900.574604.006701.997401.51900HepG2PTBP1
RASA3ENSG00000185989.934.119009.102901.906102.886502.20250HepG2PUM2
RASA3ENSG00000185989.9100.453602.865305.1316019.2895017.59240HepG2RAVER1
RASA3ENSG00000185989.90.0000010.45490-99999.999992.767602.06090HepG2SF3B1
RASA3ENSG00000185989.967.972209.700002.808809.619308.83990HepG2SRFBP1
RASA3ENSG00000185989.91097.063201290.94280-0.234801.988501.49210K562AGGF1
RASA3ENSG00000185989.91079.213001343.29690-0.315801.891201.34720K562AKAP8L
RASA3ENSG00000185989.9780.908501350.66430-0.790408.877007.92350K562AQR
RASA3ENSG00000185989.9955.05940756.209300.336703.224902.18850K562BCLAF1
RASA3ENSG00000185989.9838.30700633.907400.403102.655801.80170K562BOP1
RASA3ENSG00000185989.91011.922501385.83030-0.453707.048606.07500K562DDX47
RASA3ENSG00000185989.91232.347801017.622300.276102.658101.47980K562EIF2S1
RASA3ENSG00000185989.9354.42990576.42550-0.701603.554102.40040K562EIF3A
RASA3ENSG00000185989.9750.39360581.270600.368302.150201.34890K562FTO
RASA3ENSG00000185989.9595.744701006.65610-0.7568011.4028010.26110K562FXR1
RASA3ENSG00000185989.9365.86370616.29970-0.752305.287404.23880K562G3BP2
RASA3ENSG00000185989.9858.92660643.540200.416403.226102.37030K562GPKOW
RASA3ENSG00000185989.9959.054401256.31050-0.389503.512702.66370K562GRSF1
RASA3ENSG00000185989.9873.137201211.10420-0.472005.084903.64370K562HNRNPA1
RASA3ENSG00000185989.9610.94550924.46200-0.597606.222005.36160K562HNRNPC
RASA3ENSG00000185989.9645.58120862.37180-0.417702.771901.53520K562HNRNPK
RASA3ENSG00000185989.9389.34830603.79470-0.633004.397803.20560K562HNRNPM
RASA3ENSG00000185989.91135.21120878.582100.369602.995401.74220K562IGF2BP3
RASA3ENSG00000185989.9970.627101146.20700-0.239902.169601.44840K562MTPAP
RASA3ENSG00000185989.9778.164001046.05270-0.426802.924402.06810K562PCBP3
RASA3ENSG00000185989.9577.79870802.34670-0.473704.478703.45780K562POLR2G
RASA3ENSG00000185989.91643.064402064.27340-0.329203.087702.22720K562PUF60
RASA3ENSG00000185989.9892.843901332.09300-0.577205.609304.86840K562PUS1
RASA3ENSG00000185989.91084.076301297.99770-0.259802.026301.50430K562RBM15
RASA3ENSG00000185989.9581.18700756.23230-0.379802.773901.78260K562RCC2
RASA3ENSG00000185989.9477.35490714.94620-0.582805.230803.73880K562SAFB
RASA3ENSG00000185989.9545.88550739.15540-0.437303.004401.49240K562SDAD1
RASA3ENSG00000185989.9600.86440804.79040-0.421603.672802.72760K562SYNCRIP
RASA3ENSG00000185989.91138.48870843.889800.431904.330803.27240K562TIA1
RASA3ENSG00000185989.9319.06170597.49670-0.905108.121706.08970K562U2AF1
RASA3ENSG00000185989.9403.25220617.05060-0.613705.995304.81710K562U2AF2
RASA3ENSG00000185989.91878.752701350.290400.476409.002507.79880K562UPF1
RASA3ENSG00000185989.9963.565101201.53650-0.318403.797702.81700K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RASA3 is not available on ENCORE database.





1 RBPs can affect the splicing of RASA3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
A3SSRASA3ENSG00000185989.9chr13-1147827301147829171147827301147828271147835791147837280.086000.020760.09842longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for RASA3 is not avaliable on ENCORE database.