QRICH1

General Information

Gene Name       : QRICH1
Gene ID             : ENSG00000198218.10
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: QRICH1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878QRICH1ENSG00000198218.10224.5957.71141.15ENCSR000AEF
HepG2QRICH1ENSG00000198218.1054.7662.2958.52ENCSR985KAT
K562QRICH1ENSG00000198218.1047.0649.3148.19ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for QRICH1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • QRICH1 RNA is bound by 18 proteins.  







eCLIP assay for QRICH1 is not avaliable on ENCORE database.





18 proteins are bound to QRICH1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr34911437549114458-3'-UTR,5'-UTR,CDS,intron-Distal3.070145.65791K562ZNF622
chr34906722249067296-3'-UTR,intron-Distal,intron-Proximal4.396603.83279HepG2ZC3H11A
chr34906720849067282-3'-UTR,intron-Distal,intron-Proximal4.735287.91848K562PUM2
chr34911438949114467-3'-UTR,5'-UTR,CDS,intron-Distal3.470404.44431K562BUD13
chr34913084849130920-5'-UTR,intron-Distal4.344864.38558HepG2HNRNPM
chr34913135149131423-5'-UTR,intron-Distal3.409843.12941K562UCHL5
chr34913069549130775-5'-UTR,intron-Distal3.667034.94813HepG2HNRNPM
chr34913120549131351-5'-UTR,intron-Distal3.730705.55742HepG2PRPF4
chr34913078249130846-5'-UTR,intron-Distal4.527714.90578HepG2HNRNPM
chr34913101649131170-5'-UTR,intron-Distal,intron-Proximal3.208515.35897HepG2PRPF4
chr34913068449130944-5'-UTR,intron-Distal4.360819.78095K562HNRNPM
chr34909512449095192-CDS,intron-Distal3.340254.30970K562IGF2BP2
chr34911417649114231-CDS,intron-Distal,intron-Proximal4.032893.48187K562RBM15
chr34907061549070653-CDS,intron-Distal,intron-Proximal4.169563.80193HepG2GRWD1
chr34908446049084522-CDS,intron-Distal,intron-Proximal3.627375.43815HepG2PRPF8
chr34907009049070187-CDS,intron-Distal3.965413.67596K562GRWD1
chr34909519349095269-CDS,intron-Distal3.754576.07436K562IGF2BP2
chr34911411049114165-CDS,intron-Distal,intron-Proximal4.509744.35676HepG2PRPF8
chr34907049749070566-CDS,intron-Distal,intron-Proximal5.1926712.43500HepG2PRPF8
chr34911434149114449-CDS,intron-Distal3.330386.59678HepG2BCLAF1
chr34907013649070286-CDS,intron-Distal,intron-Proximal3.0487810.00177HepG2BUD13
chr34907010549070222-CDS,intron-Distal,intron-Proximal3.291956.49271HepG2GRWD1
chr34907060249070671-CDS,intron-Distal,intron-Proximal3.497434.63311K562AQR
chr34907012949070268-CDS,intron-Distal,intron-Proximal4.104436.28932HepG2AQR
chr34907008249070194-CDS,intron-Distal3.093565.41277K562UCHL5
chr34911430949114363-CDS,intron-Distal3.387364.22460K562RBM15
chr34911639949116492-intron-Distal4.067403.81649K562ILF3
chr34907021649070257-intron-Distal,intron-Proximal3.548913.10102HepG2SF3B4
chr34911660149116670-intron-Distal3.743223.38413HepG2HNRNPC
chr34910917949109264-intron-Distal3.500824.97292HepG2ILF3
chr34907050949070553-intron-Distal,intron-Proximal4.492789.80019K562AQR
chr34907001049070041-intron-Distal,intron-Proximal5.1236311.12698K562AQR
chr34911643449116501-intron-Distal3.382684.15830HepG2ILF3
chr34912575349125893-intron-Distal3.645574.97292HepG2ILF3
chr34912860949128658-intron-Distal3.239323.46325HepG2SUGP2
chr34907004449070055-intron-Distal,intron-Proximal4.9293510.08262K562AQR
chr34910887149108967-intron-Distal3.447154.71769HepG2ILF3
chr34907021349070256-intron-Distal,intron-Proximal4.6564212.17993HepG2SF3A3
chr34910879749108911-intron-Distal3.941563.31709K562ILF3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for QRICH1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for QRICH1 is not available on ENCORE database.

  • 41 RBPs can affect the levels of QRICH1.  








The Knockdown/knockout RNA-Seq assay for QRICH1 is not available on ENCORE database.





41 RBPs can affect the gene expression of QRICH1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
QRICH1ENSG00000198218.61912.947301446.016300.403607.375606.48050HepG2ACO1
QRICH1ENSG00000198218.61068.576001568.50200-0.553704.417603.76720HepG2AKAP1
QRICH1ENSG00000198218.61818.653301445.478500.331203.875403.11380HepG2CKAP4
QRICH1ENSG00000198218.61041.750001263.15870-0.278001.947001.36530HepG2DDX21
QRICH1ENSG00000198218.61710.692501371.063000.319201.881001.34980HepG2EIF4A3
QRICH1ENSG00000198218.61679.334701194.511800.491403.700802.79950HepG2FUBP3
QRICH1ENSG00000198218.61798.908401383.553000.378602.823502.12380HepG2FXR1
QRICH1ENSG00000198218.61698.333001362.571700.317702.191701.40400HepG2G3BP2
QRICH1ENSG00000198218.61872.455101299.752300.526605.645304.67550HepG2HNRNPK
QRICH1ENSG00000198218.62157.537503013.15730-0.481903.622802.67310HepG2LARP4
QRICH1ENSG00000198218.61582.855801356.430300.222602.216901.66240HepG2PCBP1
QRICH1ENSG00000198218.61625.016201988.10910-0.290903.436402.87670HepG2RBM22
QRICH1ENSG00000198218.61823.993602299.31030-0.334103.115302.39710HepG2RPLP0
QRICH1ENSG00000198218.61662.240101394.243200.253503.169602.48970HepG2SAFB2
QRICH1ENSG00000198218.63840.911302536.374800.598604.624603.73970HepG2SF3A3
QRICH1ENSG00000198218.61672.934801436.985900.219202.110401.58310HepG2SF3B4
QRICH1ENSG00000198218.61732.308201499.902000.207702.064501.63950HepG2SRSF1
QRICH1ENSG00000198218.61658.235502204.35680-0.410702.645401.66930HepG2SRSF3
QRICH1ENSG00000198218.61525.857002109.17650-0.467108.811407.87380K562AGGF1
QRICH1ENSG00000198218.61558.609402194.67700-0.493705.834004.86320K562AKAP8L
QRICH1ENSG00000198218.63007.714902160.638500.477105.497604.71940K562AQR
QRICH1ENSG00000198218.62212.311402599.98960-0.233002.004801.32900K562CPSF6
QRICH1ENSG00000198218.62742.517003210.75710-0.227402.762502.11200K562DDX47
QRICH1ENSG00000198218.61519.778301179.919100.365102.721601.81640K562EFTUD2
QRICH1ENSG00000198218.61375.17250945.851600.539805.818904.63510K562EIF4A3
QRICH1ENSG00000198218.61113.33750851.743800.386303.963502.53680K562EIF4B
QRICH1ENSG00000198218.61463.06570983.637400.572706.782105.89470K562FXR1
QRICH1ENSG00000198218.62145.894702590.11990-0.271402.425701.71540K562GRSF1
QRICH1ENSG00000198218.62650.540503593.05450-0.438904.858603.81210K562HSPD1
QRICH1ENSG00000198218.61766.797702329.15950-0.398702.799601.96890K562KIF1C
QRICH1ENSG00000198218.61416.551701828.88220-0.368602.139801.38720K562NAA15
QRICH1ENSG00000198218.62429.563002716.92140-0.161302.387901.69020K562NSUN2
QRICH1ENSG00000198218.62359.024203008.14880-0.350703.162202.27650K562PPIG
QRICH1ENSG00000198218.61736.883101148.200900.597006.556005.40030K562PRPF8
QRICH1ENSG00000198218.61417.543601156.122400.294002.470701.83740K562PTBP1
QRICH1ENSG00000198218.61382.433602176.63730-0.654908.044907.16590K562PUS1
QRICH1ENSG00000198218.61675.304402120.70570-0.340104.129903.42150K562RBM15
QRICH1ENSG00000198218.62456.558601799.043400.449305.003803.54590K562SAFB
QRICH1ENSG00000198218.62389.480601859.965400.361302.868901.39600K562SDAD1
QRICH1ENSG00000198218.61881.071001424.631400.400903.835002.56770K562SRFBP1
QRICH1ENSG00000198218.61496.520601188.671400.332202.843101.77270K562SRSF4
QRICH1ENSG00000198218.62566.909002025.126900.341903.994703.00400K562SYNCRIP
QRICH1ENSG00000198218.6655.19850823.37610-0.329602.548401.77710K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for QRICH1 is not available on ENCORE database.





15 RBPs can affect the splicing of QRICH1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEQRICH1ENSG00000198218.6chr3-491298294912988949114141491144714913134449131484-0.573000.005900.06042excludedHepG2U2AF2
SEQRICH1ENSG00000198218.6chr3-4907033149070400490700544907020649070552490707080.068000.000050.00097includedK562AQR
SEQRICH1ENSG00000198218.6chr3-490818224908193749070479490706614908385749083891-0.125000.000000.00000excludedK562AQR
SEQRICH1ENSG00000198218.6chr3-490818224908193749070515490706614908385749084012-0.094000.000550.01033excludedK562PUS1
A3SSQRICH1ENSG00000198218.6chr3-4908385749084059490838574908401249084501490846790.083000.000840.02297longerHepG2U2AF2
A3SSQRICH1ENSG00000198218.6chr3-4906961549069848490696154906970649070054490702060.160000.000000.00000longerK562AQR
A3SSQRICH1ENSG00000198218.6chr3-4907051549070708490705154907066149081822490819760.149000.000000.00000longerK562AQR
A3SSQRICH1ENSG00000198218.6chr3-4908391049084123490839104908401249084501490846790.189000.000000.00000longerK562AQR
A3SSQRICH1ENSG00000198218.6chr3-490696154906985149069615490697374907005449070206-0.386000.005650.03220shorterK562AQR
A3SSQRICH1ENSG00000198218.6chr3-4908385749084059490838574908401249084501490846790.088000.000480.02201longerHepG2U2AF1
RIQRICH1ENSG00000198218.6chr3-4907005449070661490700544907020649070552490706610.126000.003650.02376includedK562PUS1
RIQRICH1ENSG00000198218.6chr3-4907005449070661490700544907020649070552490706610.073000.003390.03681includedHepG2SF3A3
RIQRICH1ENSG00000198218.6chr3-4907005449070661490700544907020649070552490706610.171000.000220.01156includedHepG2TIA1
RIQRICH1ENSG00000198218.6chr3-4907005449070661490700544907020649070552490706610.218000.000260.00487includedHepG2PRPF8
RIQRICH1ENSG00000198218.6chr3-4907005449070661490700544907020649070552490706610.212000.000240.03321includedK562HNRNPK
RIQRICH1ENSG00000198218.6chr3-4907005449070661490700544907020649070552490706610.067000.001130.02826includedHepG2FTO
RIQRICH1ENSG00000198218.6chr3-4907005449070661490700544907020649070552490706610.240000.000000.00001includedHepG2QKI
RIQRICH1ENSG00000198218.6chr3-4907005449070661490700544907020649070552490706610.137000.003460.03265includedHepG2TAF15
RIQRICH1ENSG00000198218.6chr3-490700544907066149070054490702064907055249070661-0.143000.000130.01807excludedK562XRCC6
RIQRICH1ENSG00000198218.6chr3-4907005449070661490700544907020649070552490706610.189000.000020.00030includedHepG2SF3B4
RIQRICH1ENSG00000198218.6chr3-490700544907066149070054490702064907055249070661-0.131000.000320.00494excludedHepG2RBM22
RIQRICH1ENSG00000198218.6chr3-4907005449070661490700544907020649070552490706610.259000.000000.00005includedHepG2HNRNPK
RIQRICH1ENSG00000198218.6chr3-490700544907066149070054490702064907055249070661-0.078000.000820.05500excludedK562SAFB
RIQRICH1ENSG00000198218.6chr3-4907005449070661490700544907020649070552490706610.156000.000150.00118includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for QRICH1 is not avaliable on ENCORE database.