MTMR1

General Information

Gene Name       : MTMR1
Gene ID             : ENSG00000063601.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: MTMR1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MTMR1ENSG00000063601.1625.5521.9323.74ENCSR000AEF
HepG2MTMR1ENSG00000063601.168.4110.839.62ENCSR985KAT
K562MTMR1ENSG00000063601.1616.3317.3516.84ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MTMR1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • MTMR1 RNA is bound by 9 proteins.  







eCLIP assay for MTMR1 is not avaliable on ENCORE database.





9 proteins are bound to MTMR1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chrX149887085149887146+3'-UTR,5'-UTR,CDS,intron-Proximal3.686523.06676K562U2AF2
chrX149931747149931802+3'-UTR,intron-Distal3.217704.75109K562UPF1
chrX149933050149933133+3'-UTR5.271968.40676K562UPF1
chrX149932962149933092+3'-UTR,intron-Proximal4.024847.91182K562FAM120A
chrX149932699149932766+3'-UTR,intron-Distal4.413858.17454K562UPF1
chrX149896163149896237+CDS4.073758.34773K562YBX3
chrX149901025149901120+CDS4.469144.70478HepG2BCLAF1
chrX149886878149886975+intron-Distal4.784947.17304K562KHSRP
chrX149876792149876847+intron-Distal4.032543.66668K562KHSRP
chrX149875237149875302+intron-Distal3.902153.84033K562SAFB2
chrX149876667149876738+intron-Distal4.233064.96658K562KHSRP
chrX149881603149881713+intron-Distal3.927823.66668K562KHSRP
chrX149873650149873785+intron-Distal4.339015.16344K562SAFB2
chrX149874519149874637+intron-Distal4.444394.12522HepG2HLTF
chrX149869308149869387+intron-Distal4.485935.08344K562TARDBP
chrX149882558149882684+intron-Distal4.093597.26586K562KHSRP
chrX149886787149886878+intron-Distal3.538096.80241K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MTMR1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MTMR1 is not available on ENCORE database.

  • 51 RBPs can affect the levels of MTMR1.  








The Knockdown/knockout RNA-Seq assay for MTMR1 is not available on ENCORE database.





51 RBPs can affect the gene expression of MTMR1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MTMR1ENSG00000063601.12456.38030370.634200.300101.929901.36100HepG2CKAP4
MTMR1ENSG00000063601.12413.55350239.626300.787204.032203.10310HepG2CNOT7
MTMR1ENSG00000063601.12388.21060288.117200.430102.550401.43990HepG2DDX1
MTMR1ENSG00000063601.12538.00660383.156900.489602.785302.15740HepG2DDX3X
MTMR1ENSG00000063601.12500.44110340.446800.555702.666501.99010HepG2EIF4B
MTMR1ENSG00000063601.12760.05370581.689800.385803.728803.04810HepG2ETF1
MTMR1ENSG00000063601.12642.30530393.339800.707404.730203.74620HepG2FIP1L1
MTMR1ENSG00000063601.12566.14120312.181500.858702.853201.85620HepG2IGF2BP3
MTMR1ENSG00000063601.12401.84380321.923700.319802.112601.46250HepG2ILF2
MTMR1ENSG00000063601.12731.83990504.320000.537103.231402.33190HepG2LARP4
MTMR1ENSG00000063601.12525.76740363.253000.533403.102102.43400HepG2NCBP2
MTMR1ENSG00000063601.12467.22070330.303600.500203.971603.34240HepG2PTBP1
MTMR1ENSG00000063601.12180.95440414.71690-1.1965012.7440011.59010HepG2PUF60
MTMR1ENSG00000063601.12591.47420440.219300.426003.825803.15270HepG2PUM1
MTMR1ENSG00000063601.12475.19730377.547500.331802.260301.69050HepG2PUS1
MTMR1ENSG00000063601.12481.74330357.673600.429502.897502.26110HepG2QKI
MTMR1ENSG00000063601.12735.87340486.187500.597806.740906.01640HepG2RBM22
MTMR1ENSG00000063601.12341.89920240.617000.506702.136901.43330HepG2RPS3A
MTMR1ENSG00000063601.12366.57430219.068400.742605.014603.76080HepG2SERBP1
MTMR1ENSG00000063601.12496.23760378.986300.388802.071701.45500HepG2SF3B1
MTMR1ENSG00000063601.12452.78210343.843800.397002.684502.10070HepG2SF3B4
MTMR1ENSG00000063601.12730.95880549.135400.412504.071103.49750HepG2SRFBP1
MTMR1ENSG00000063601.12584.47620358.916800.703408.063107.35260HepG2SRSF1
MTMR1ENSG00000063601.12542.05110409.447300.404703.008602.35860HepG2SRSF5
MTMR1ENSG00000063601.12370.12010292.013700.341902.097001.60300HepG2SRSF9
MTMR1ENSG00000063601.12542.06790405.126500.420002.590401.74770HepG2TUFM
MTMR1ENSG00000063601.12527.99140336.473300.649904.654803.85070HepG2U2AF1
MTMR1ENSG00000063601.12499.59260391.761900.350702.597601.91720HepG2UPF1
MTMR1ENSG00000063601.12407.64890293.018900.476203.624202.87220HepG2ZC3H8
MTMR1ENSG00000063601.12853.29910990.78300-0.215501.783501.30740K562AGGF1
MTMR1ENSG00000063601.121034.823001409.13520-0.445403.855903.18630K562AQR
MTMR1ENSG00000063601.12683.95740859.80670-0.330102.318701.59400K562CPSF6
MTMR1ENSG00000063601.121213.576601423.96870-0.230702.061201.48490K562DDX47
MTMR1ENSG00000063601.12942.747201173.41280-0.315803.152602.39180K562EIF2S2
MTMR1ENSG00000063601.12668.98020874.86500-0.387102.620901.78930K562FMR1
MTMR1ENSG00000063601.12888.37410673.695800.399003.837003.14190K562FXR1
MTMR1ENSG00000063601.12524.27030732.82980-0.483204.002302.25290K562G3BP1
MTMR1ENSG00000063601.12650.56950820.89050-0.335502.165601.46080K562GPKOW
MTMR1ENSG00000063601.121177.871801563.65430-0.408704.009403.10230K562GRSF1
MTMR1ENSG00000063601.12999.109401286.80100-0.365103.251602.09720K562HNRNPL
MTMR1ENSG00000063601.12657.49710859.69710-0.386802.303201.45800K562HNRNPM
MTMR1ENSG00000063601.121027.962301225.72320-0.253802.155101.36830K562MBNL1
MTMR1ENSG00000063601.12941.809001153.13320-0.292103.675402.82860K562NSUN2
MTMR1ENSG00000063601.12653.68290965.97470-0.563404.796402.65070K562PKM
MTMR1ENSG00000063601.12887.336901186.51390-0.419203.460002.52670K562PPIG
MTMR1ENSG00000063601.12443.97010605.73760-0.448203.130202.16130K562PSIP1
MTMR1ENSG00000063601.121166.196401936.87370-0.731909.651808.10580K562PUF60
MTMR1ENSG00000063601.12425.23280694.07860-0.706805.402004.25720K562RPS19
MTMR1ENSG00000063601.12432.02230695.30720-0.686502.409201.31900K562SF1
MTMR1ENSG00000063601.12761.970101137.73540-0.578408.827407.42780K562SF3A3
MTMR1ENSG00000063601.121054.92730767.242600.459304.569803.66560K562SRSF1
MTMR1ENSG00000063601.12597.05170776.55100-0.379202.458901.78960K562TARDBP
MTMR1ENSG00000063601.12748.89810612.596700.289701.983701.30340K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MTMR1 is not available on ENCORE database.





8 RBPs can affect the splicing of MTMR1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEMTMR1ENSG00000063601.12chrX+1498808131498808371498676671498677731498870961498871720.230000.001100.02256includedK562SRSF1
SEMTMR1ENSG00000063601.12chrX+1498808131498808371498676671498677731498870961498871720.192000.000320.07589includedK562PUM1
SEMTMR1ENSG00000063601.12chrX+1499195011499197121499192011499193151499241601499243370.289000.001280.03299includedHepG2HNRNPK
SEMTMR1ENSG00000063601.12chrX+149880813149880837149867667149867773149887096149887172-0.307000.000030.00211excludedK562FXR1
SEMTMR1ENSG00000063601.12chrX+1499195011499197121499192011499193151499241601499243370.177000.000610.02576includedK562HNRNPU
SEMTMR1ENSG00000063601.12chrX+149880813149880837149867667149867773149887096149887172-0.311000.000070.03992excludedK562NCBP2
SEMTMR1ENSG00000063601.12chrX+1498808131498808371498676671498677731498870961498871720.422000.000000.00002includedK562PTBP1
A3SSMTMR1ENSG00000063601.12chrX+1499241291499243371499241601499243371499192011499193150.059000.016000.07898longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for MTMR1 is not avaliable on ENCORE database.