KRTCAP2

General Information

Gene Name : KRTCAP2
Gene ID : ENSG00000163463.11
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: KRTCAP2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	KRTCAP2	ENSG00000163463.11	58.34	94.68	76.51	ENCSR000AEF
HepG2	KRTCAP2	ENSG00000163463.11	79.82	56.07	67.94	ENCSR985KAT
K562	KRTCAP2	ENSG00000163463.11	320.01	281.20	300.61	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for KRTCAP2 is not avaliable on ENCORE database.

Proteins bound to RNA

KRTCAP2 RNA is bound by 15 proteins.

eCLIP assay for KRTCAP2 is not avaliable on ENCORE database.

15 proteins are bound to KRTCAP2 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	155141908	155142038	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.86536	10.61473	HepG2	GRWD1
chr1	155141915	155141970	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.47709	27.50815	K562	IGF2BP2
chr1	155141915	155142037	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.05548	10.60331	K562	IGF2BP1
chr1	155145052	155145105	-	CDS,intron-Distal,intron-Proximal	3.84418	14.74110	K562	PABPC4
chr1	155141969	155142003	-	CDS,intron-Distal	3.80560	61.58727	K562	YBX3
chr1	155142266	155142307	-	CDS,intron-Distal,intron-Proximal	3.25776	18.61343	K562	YBX3
chr1	155142003	155142037	-	CDS,intron-Distal	3.83741	59.52941	K562	YBX3
chr1	155142266	155142303	-	CDS,intron-Distal,intron-Proximal	3.30210	5.41399	K562	IGF2BP2
chr1	155145696	155145746	-	CDS,intron-Distal,intron-Proximal	5.29921	23.04581	K562	DDX3X
chr1	155142004	155142037	-	CDS,intron-Distal	3.71006	3.06406	HepG2	IGF2BP1
chr1	155141939	155141969	-	CDS,intron-Distal,intron-Proximal	4.31229	26.43057	K562	YBX3
chr1	155145649	155145714	-	CDS,intron-Distal,intron-Proximal	5.28459	7.28294	K562	AQR
chr1	155145271	155145309	-	CDS,intron-Distal,intron-Proximal	3.15294	5.66231	K562	PABPC4
chr1	155145330	155145369	-	CDS,intron-Distal,intron-Proximal	5.17690	19.82272	K562	DDX3X
chr1	155142311	155142347	-	CDS,intron-Distal,intron-Proximal	4.69057	4.12401	HepG2	U2AF2
chr1	155145211	155145251	-	CDS,intron-Distal,intron-Proximal	3.62509	6.22806	K562	PABPC4
chr1	155145040	155145071	-	CDS,intron-Distal,intron-Proximal	5.34682	4.32365	K562	PCBP1
chr1	155145265	155145376	-	CDS,intron-Distal,intron-Proximal	4.56570	5.85562	K562	GEMIN5
chr1	155145266	155145297	-	CDS,intron-Distal,intron-Proximal	4.47824	3.99162	HepG2	DDX3X
chr1	155145339	155145425	-	CDS,intron-Distal,intron-Proximal	5.32045	7.91936	K562	SF3B4
chr1	155141999	155142020	-	CDS,intron-Distal	3.54052	6.98710	K562	IGF2BP2
chr1	155145243	155145324	-	CDS,intron-Distal,intron-Proximal	3.41441	24.77932	K562	DDX3X
chr1	155145321	155145366	-	CDS,intron-Distal,intron-Proximal	3.38653	4.84415	HepG2	DDX3X
chr1	155145695	155145745	-	CDS,intron-Distal,intron-Proximal	3.66078	5.84843	HepG2	DDX3X
chr1	155145367	155145416	-	CDS,intron-Distal,intron-Proximal	6.24245	7.66684	HepG2	SF3A3
chr1	155141970	155141999	-	CDS,intron-Distal	4.93793	22.63718	K562	IGF2BP2
chr1	155143087	155143189	-	intron-Distal	5.18649	7.19009	HepG2	U2AF2
chr1	155145593	155145697	-	intron-Distal,intron-Proximal	3.73746	5.15405	HepG2	PRPF4
chr1	155145402	155145641	-	intron-Distal,intron-Proximal	3.22650	5.43415	K562	RBFOX2
chr1	155145372	155145431	-	intron-Distal,intron-Proximal	3.69889	9.40935	HepG2	SF3B4
chr1	155145397	155145593	-	intron-Distal,intron-Proximal	4.60064	16.76009	HepG2	PRPF4
chr1	155144947	155145034	-	intron-Distal,intron-Proximal	3.42343	4.98422	K562	PRPF8
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for KRTCAP2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for KRTCAP2 is not available on ENCORE database.
46 RBPs can affect the levels of KRTCAP2.

The Knockdown/knockout RNA-Seq assay for KRTCAP2 is not available on ENCORE database.

46 RBPs can affect the gene expression of KRTCAP2 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
KRTCAP2	ENSG00000163463.7	1086.02780	660.78620	0.71670	6.11810	5.36260	HepG2	AKAP1
KRTCAP2	ENSG00000163463.7	718.50680	546.73660	0.39410	2.30890	1.58890	HepG2	ASCC1
KRTCAP2	ENSG00000163463.7	643.61840	387.25740	0.73280	5.40360	4.08090	HepG2	BCCIP
KRTCAP2	ENSG00000163463.7	476.09020	345.69980	0.46160	2.78480	2.18490	HepG2	BOP1
KRTCAP2	ENSG00000163463.7	684.20500	519.44010	0.39740	2.33140	1.61630	HepG2	CIRBP
KRTCAP2	ENSG00000163463.7	498.34880	317.37740	0.65090	4.64610	3.77550	HepG2	CPSF6
KRTCAP2	ENSG00000163463.7	845.61400	660.32440	0.35670	3.46670	2.65470	HepG2	DAZAP1
KRTCAP2	ENSG00000163463.7	562.55280	380.74450	0.56310	3.37070	2.52730	HepG2	DDX55
KRTCAP2	ENSG00000163463.7	497.19790	397.18980	0.32390	2.35240	1.74130	HepG2	DNAJC2
KRTCAP2	ENSG00000163463.7	683.80650	522.69940	0.38750	2.15440	1.62390	HepG2	EIF2S1
KRTCAP2	ENSG00000163463.7	827.63970	577.62360	0.51880	3.43220	2.72150	HepG2	EIF4A3
KRTCAP2	ENSG00000163463.7	702.72840	540.65580	0.37820	2.06940	1.49040	HepG2	G3BP1
KRTCAP2	ENSG00000163463.7	626.39360	499.79660	0.32560	2.11740	1.48320	HepG2	HNRNPF
KRTCAP2	ENSG00000163463.7	811.28320	547.53980	0.56710	4.68830	3.80010	HepG2	HNRNPK
KRTCAP2	ENSG00000163463.7	495.07220	343.35150	0.52790	3.19250	2.52260	HepG2	HNRNPLL
KRTCAP2	ENSG00000163463.7	771.64090	583.06440	0.40420	2.47400	1.85310	HepG2	MAGOH
KRTCAP2	ENSG00000163463.7	673.23940	496.06120	0.44050	2.87020	2.04690	HepG2	MSI2
KRTCAP2	ENSG00000163463.7	282.69620	420.80980	-0.57390	2.16140	1.53250	HepG2	RAVER1
KRTCAP2	ENSG00000163463.7	517.86680	398.15490	0.37920	2.94200	2.28280	HepG2	SAFB2
KRTCAP2	ENSG00000163463.7	527.95310	378.15030	0.48140	2.06280	1.39230	HepG2	SNRNP70
KRTCAP2	ENSG00000163463.7	346.13520	642.80870	-0.89310	8.97950	8.23650	HepG2	SRSF1
KRTCAP2	ENSG00000163463.7	492.44860	617.03160	-0.32540	2.71860	2.09640	HepG2	SRSF5
KRTCAP2	ENSG00000163463.7	375.21860	522.92900	-0.47890	2.62850	2.08710	HepG2	SRSF9
KRTCAP2	ENSG00000163463.7	543.48090	438.29930	0.31020	2.25480	1.73540	HepG2	TRIM56
KRTCAP2	ENSG00000163463.7	341.52390	223.92210	0.60890	3.66350	2.79170	HepG2	UCHL5
KRTCAP2	ENSG00000163463.7	531.24470	347.12750	0.61380	2.40650	1.47630	HepG2	UPF2
KRTCAP2	ENSG00000163463.7	592.12890	373.12400	0.66620	4.96500	4.00150	HepG2	XRN2
KRTCAP2	ENSG00000163463.7	2411.58740	1939.86870	0.31390	4.02700	2.94380	K562	DKC1
KRTCAP2	ENSG00000163463.7	1006.25740	683.25640	0.55840	6.91990	5.67230	K562	EIF3G
KRTCAP2	ENSG00000163463.7	1411.13250	1093.97930	0.36720	3.21000	2.32940	K562	EIF4A3
KRTCAP2	ENSG00000163463.7	1976.16380	1475.94770	0.42100	4.20550	3.14550	K562	FIP1L1
KRTCAP2	ENSG00000163463.7	909.54990	1169.96620	-0.36320	2.26500	1.48830	K562	FMR1
KRTCAP2	ENSG00000163463.7	1343.98420	1137.69600	0.24030	2.21330	1.66060	K562	FXR1
KRTCAP2	ENSG00000163463.7	489.56550	708.89150	-0.53410	3.17170	2.40650	K562	G3BP2
KRTCAP2	ENSG00000163463.7	1312.99000	1651.26750	-0.33070	2.33560	1.35440	K562	HNRNPA1
KRTCAP2	ENSG00000163463.7	2571.12830	2000.91880	0.36160	3.43500	2.54980	K562	HSPD1
KRTCAP2	ENSG00000163463.7	2262.43680	1831.26190	0.30490	2.62850	1.58910	K562	MAK16
KRTCAP2	ENSG00000163463.7	1506.38330	686.93960	1.13270	3.11190	2.04670	K562	PABPN1
KRTCAP2	ENSG00000163463.7	1304.37940	1738.93530	-0.41480	3.19670	2.30250	K562	PCBP3
KRTCAP2	ENSG00000163463.7	1006.86290	1333.80390	-0.40570	4.17150	3.18550	K562	POLR2G
KRTCAP2	ENSG00000163463.7	2256.48440	1675.64990	0.42930	4.32640	3.26920	K562	PPIG
KRTCAP2	ENSG00000163463.7	1326.62780	1066.01760	0.31540	2.06440	1.41230	K562	PRPF8
KRTCAP2	ENSG00000163463.7	1402.47300	627.84000	1.15940	2.62990	1.47120	K562	SF1
KRTCAP2	ENSG00000163463.7	995.40590	736.81620	0.43390	4.30810	3.23480	K562	SF3B4
KRTCAP2	ENSG00000163463.7	1735.11610	764.84680	1.18170	3.59120	2.02810	K562	SFPQ
KRTCAP2	ENSG00000163463.7	1447.74510	1692.92300	-0.22570	2.66430	1.74280	K562	SRPK2
KRTCAP2	ENSG00000163463.7	1130.14710	1518.16920	-0.42580	5.07720	2.96090	K562	SRSF9
KRTCAP2	ENSG00000163463.7	1475.26840	1067.86540	0.46610	4.06350	3.19960	K562	TARDBP
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for KRTCAP2 is not available on ENCORE database.

7 RBPs can affect the splicing of KRTCAP2 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A3SS	KRTCAP2	ENSG00000163463.7	chr1	-	155142266	155144965			155142266	155142333	155145040	155145368	0.05100	0.00001	0.00689	longer	HepG2	FTO
RI	KRTCAP2	ENSG00000163463.7	chr1	-	155145040	155145368			155145040	155145104	155145213	155145368	-0.19000	0.00814	0.05086	excluded	HepG2	U2AF2
MXE	KRTCAP2	ENSG00000163463.7	chr1	-	155142266	155142333	155145040	155145368	155141884	155142036	155145696	155145727	0.14800	0.00000	0.00000	1included	K562	UCHL5
MXE	KRTCAP2	ENSG00000163463.7	chr1	-	155142266	155142333	155145040	155145368	155141884	155142036	155145696	155145727	0.18000	0.00000	0.00000	1included	K562	XRN2
MXE	KRTCAP2	ENSG00000163463.7	chr1	-	155142266	155142333	155145040	155145368	155141884	155142036	155145696	155145727	0.11400	0.00000	0.00004	1included	HepG2	XPO5
MXE	KRTCAP2	ENSG00000163463.7	chr1	-	155142266	155144965	155145040	155145368	155141884	155142036	155145696	155145781	0.12500	0.00000	0.00003	1included	K562	TARDBP
MXE	KRTCAP2	ENSG00000163463.7	chr1	-	155142266	155142333	155145040	155145368	155141884	155142036	155145696	155145727	0.11300	0.00000	0.00002	1included	K562	TARDBP
MXE	KRTCAP2	ENSG00000163463.7	chr1	-	155142266	155142333	155145040	155145368	155141884	155142036	155145696	155145727	0.15800	0.00000	0.00000	1included	K562	PRPF8
MXE	KRTCAP2	ENSG00000163463.7	chr1	-	155145040	155145104	155145213	155145368	155142266	155142333	155145696	155145809	0.13400	0.00000	0.00000	1included	K562	PRPF8

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

KRTCAP2

General Information

Functions

Localization

Domains (AlphaFold: KRTCAP2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for KRTCAP2 is not avaliable on ENCORE database.

15 proteins are bound to KRTCAP2 RNA:

eCLIP assay for KRTCAP2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for KRTCAP2 is not available on ENCORE database.

46 RBPs can affect the gene expression of KRTCAP2 :

The Knockdown/knockout RNA-Seq assay for KRTCAP2 is not available on ENCORE database.

7 RBPs can affect the splicing of KRTCAP2 :

The Knockdown/knockout RNA-Seq assay for KRTCAP2 is not avaliable on ENCORE database.