JKAMP

General Information

Gene Name       : JKAMP
Gene ID             : ENSG00000050130.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: JKAMP)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878JKAMPENSG00000050130.1735.5031.2733.38ENCSR000AEF
HepG2JKAMPENSG00000050130.1728.4643.4235.94ENCSR985KAT
K562JKAMPENSG00000050130.1724.6228.6526.63ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for JKAMP is not avaliable on ENCORE database.



Proteins bound to RNA
  • JKAMP RNA is bound by 5 proteins.  







eCLIP assay for JKAMP is not avaliable on ENCORE database.





5 proteins are bound to JKAMP RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr145997100459971068+3'-UTR3.921653.66457HepG2IGF2BP3
chr145995124059951312+5'-UTR,CDS,intron-Proximal4.471195.47892K562DDX3X
chr145995123659951360+5'-UTR,CDS,intron-Proximal3.313173.87702HepG2NCBP2
chr145995436359954429+CDS,intron-Proximal4.032204.69223K562SF3B4
chr145995490759955041+intron-Distal3.302773.06005HepG2QKI
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for JKAMP is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for JKAMP is not available on ENCORE database.

  • 50 RBPs can affect the levels of JKAMP.  








The Knockdown/knockout RNA-Seq assay for JKAMP is not available on ENCORE database.





50 RBPs can affect the gene expression of JKAMP :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
JKAMPENSG00000050130.13905.65220674.451400.425105.252804.46770HepG2ACO1
JKAMPENSG00000050130.13568.06780780.32150-0.458003.305102.22300HepG2ADAR
JKAMPENSG00000050130.131570.117401064.389800.560704.523503.86500HepG2AKAP1
JKAMPENSG00000050130.131022.55920768.343700.412303.894903.00270HepG2CALR
JKAMPENSG00000050130.131104.65750836.728200.400702.878902.09020HepG2CIRBP
JKAMPENSG00000050130.13557.50300674.31530-0.274402.201001.59730HepG2CKAP4
JKAMPENSG00000050130.13317.15320479.37740-0.596002.711001.64460HepG2CSTF2
JKAMPENSG00000050130.13310.46880578.02750-0.896704.649102.87970HepG2DDX28
JKAMPENSG00000050130.131401.794701019.635900.459103.583702.88230HepG2DDX3X
JKAMPENSG00000050130.13649.10160778.81720-0.262802.387801.77350HepG2DNAJC2
JKAMPENSG00000050130.13304.04790842.01500-1.4695021.9297020.36700HepG2EIF2S1
JKAMPENSG00000050130.13678.18930514.731200.397802.499101.63560HepG2EIF3D
JKAMPENSG00000050130.131027.921401186.54810-0.207001.838801.32780HepG2ETF1
JKAMPENSG00000050130.13260.25240573.07490-1.138805.203403.81560HepG2FTO
JKAMPENSG00000050130.13699.02900914.17300-0.387103.953603.11170HepG2HNRNPF
JKAMPENSG00000050130.13858.974601031.26280-0.263702.581501.92930HepG2HNRNPL
JKAMPENSG00000050130.13365.75850631.32330-0.787508.353506.84950HepG2HNRNPM
JKAMPENSG00000050130.13689.35960876.53360-0.346603.444502.77540HepG2HNRNPU
JKAMPENSG00000050130.13692.28620895.34910-0.371104.697403.76420HepG2ILF2
JKAMPENSG00000050130.13983.91340740.564600.409803.423402.52510HepG2MSI2
JKAMPENSG00000050130.13619.835701122.61870-0.8569015.2711013.55150HepG2NOL12
JKAMPENSG00000050130.13689.13950867.61110-0.332303.065602.17810HepG2PARN
JKAMPENSG00000050130.13395.05350781.79700-0.9847017.2020015.46240HepG2PPIL4
JKAMPENSG00000050130.13408.84830530.26770-0.375202.817402.03850HepG2PRPF4
JKAMPENSG00000050130.13874.523801137.62920-0.379505.238704.47590HepG2PUM1
JKAMPENSG00000050130.13825.08180686.974000.264202.282101.70950HepG2PUS1
JKAMPENSG00000050130.13434.02500731.05970-0.752203.993703.15300HepG2RAVER1
JKAMPENSG00000050130.131260.63720991.726000.346003.382802.82620HepG2RBM22
JKAMPENSG00000050130.13740.94920907.41260-0.292402.559901.96320HepG2RECQL
JKAMPENSG00000050130.131064.22020802.898100.406402.358601.73720HepG2SF3A3
JKAMPENSG00000050130.13806.056901027.59130-0.350304.029903.20690HepG2SLBP
JKAMPENSG00000050130.13772.99780910.29260-0.235902.091001.52000HepG2SMN1
JKAMPENSG00000050130.13729.24790951.38550-0.383604.168203.61690HepG2SRSF1
JKAMPENSG00000050130.13729.84500898.13130-0.299302.637401.95720HepG2SRSF7
JKAMPENSG00000050130.13388.19710611.18160-0.654804.565803.01650HepG2STAU1
JKAMPENSG00000050130.13415.76930599.87340-0.528903.074601.91120HepG2STIP1
JKAMPENSG00000050130.13451.83270851.69500-0.9145014.3013013.32040HepG2TIAL1
JKAMPENSG00000050130.13509.96310712.04520-0.481605.336804.41780HepG2UPF1
JKAMPENSG00000050130.131287.59890783.117100.7173017.8806016.79140HepG2ZNF622
JKAMPENSG00000050130.13448.31610652.93140-0.542405.541003.93010K562CPEB4
JKAMPENSG00000050130.13218.82450309.18440-0.498702.412301.43530K562CSTF2
JKAMPENSG00000050130.13494.04820675.73750-0.451804.533003.72590K562DDX47
JKAMPENSG00000050130.13109.77910231.48810-1.076304.503403.19070K562EIF3A
JKAMPENSG00000050130.13636.89970415.895500.614703.894703.02170K562G3BP2
JKAMPENSG00000050130.13301.18430411.57340-0.450502.471301.90320K562HNRNPC
JKAMPENSG00000050130.13474.27580330.632000.520403.214702.40550K562PRPF8
JKAMPENSG00000050130.131205.17920919.530200.390202.920902.08300K562PUF60
JKAMPENSG00000050130.13637.80640510.414200.321402.253701.70930K562RBM15
JKAMPENSG00000050130.13536.50610321.836400.737202.512801.36360K562SNRNP200
JKAMPENSG00000050130.13326.85150477.89900-0.548103.949203.11030K562SRSF1
JKAMPENSG00000050130.13477.15290657.80050-0.463202.927901.63720K562STAU1
JKAMPENSG00000050130.13235.62610354.93410-0.591103.136602.13430K562TIAL1
JKAMPENSG00000050130.13587.06630416.544400.495004.187503.20250K562U2AF2
JKAMPENSG00000050130.13589.96980837.72370-0.505804.751003.05200K562WRN
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for JKAMP is not available on ENCORE database.





14 RBPs can affect the splicing of JKAMP :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEJKAMPENSG00000050130.13chr14+599534305995352259951248599513115995439159954546-0.241000.000050.00167excludedK562SF3B4
SEJKAMPENSG00000050130.13chr14+599679085996798559965444599656265997057159971421-0.224000.000080.00245excludedHepG2U2AF1
SEJKAMPENSG00000050130.13chr14+599679085996798559965444599656265997057159971421-0.224000.000390.01493excludedK562AKAP8L
SEJKAMPENSG00000050130.13chr14+599679085996798559965444599656265997057159971421-0.273000.000560.00863excludedHepG2U2AF2
SEJKAMPENSG00000050130.13chr14+599679085996798559965444599656265997057159971421-0.397000.000000.00000excludedK562PUS1
SEJKAMPENSG00000050130.13chr14+599534305995352259951248599513115995439159954546-0.243000.003230.04443excludedK562PUS1
SEJKAMPENSG00000050130.13chr14+599534485995352259951220599513115995439159954546-0.211000.001910.03823excludedK562U2AF1
SEJKAMPENSG00000050130.13chr14+599534305995352259951248599513115995439159954546-0.171000.000670.02242excludedHepG2SF3A3
SEJKAMPENSG00000050130.13chr14+5995343059953522599512485995131159954391599545460.066000.000160.02251includedHepG2SUPV3L1
SEJKAMPENSG00000050130.13chr14+599679085996798559965444599656265997057159971421-0.277000.001410.04415excludedK562UTP18
SEJKAMPENSG00000050130.13chr14+599533985995352259951286599513115995439159954546-0.213000.000280.00684excludedK562U2AF2
SEJKAMPENSG00000050130.13chr14+5995343059953522599512485995131159954391599545460.215000.002020.06393includedK562TARDBP
SEJKAMPENSG00000050130.13chr14+599679085996798559965444599656265997057159971421-0.345000.000000.00002excludedK562RBM15
SEJKAMPENSG00000050130.13chr14+599534305995352259951248599513115995439159954546-0.246000.001730.04124excludedK562RBM15
SEJKAMPENSG00000050130.13chr14+599679085996798559965444599656265997057159971421-0.388000.000000.00000excludedK562AGGF1
SEJKAMPENSG00000050130.13chr14+599534305995352259951248599513115995439159954546-0.274000.001250.03310excludedK562AGGF1
SEJKAMPENSG00000050130.13chr14+5995343059953522599512485995131159954391599545460.392000.000150.07198includedK562AARS
SEJKAMPENSG00000050130.13chr14+5995343059953522599512485995131159954391599545460.194000.002270.07395includedK562PTBP1
A3SSJKAMPENSG00000050130.13chr14+5996170959961805599617355996180559954321599545460.085000.000160.00135longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for JKAMP is not avaliable on ENCORE database.