IFI27L1

General Information

Gene Name       : IFI27L1
Gene ID             : ENSG00000165948.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: IFI27L1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878IFI27L1ENSG00000165948.106.3511.819.08ENCSR000AEF
HepG2IFI27L1ENSG00000165948.1011.108.079.59ENCSR985KAT
K562IFI27L1ENSG00000165948.1013.969.7611.86ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for IFI27L1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • IFI27L1 RNA is bound by 3 proteins.  







eCLIP assay for IFI27L1 is not avaliable on ENCORE database.





3 proteins are bound to IFI27L1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr149456877394568856+3'-UTR,CDS,intron-Distal,intron-Proximal6.3151213.04469K562SF3B4
chr149456877694568838+3'-UTR,CDS,intron-Distal,intron-Proximal3.883743.56713HepG2SF3B4
chr149456330994563328+3'-UTR,CDS,intron-Proximal4.527314.13847K562AQR
chr149454767294547798+5'-UTR,intron-Proximal4.818886.71767K562DDX3X
chr149456705694567162+CDS,intron-Distal,intron-Proximal4.964545.17615K562AQR
chr149456332894563355+intron-Proximal4.721835.17615K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for IFI27L1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for IFI27L1 is not available on ENCORE database.

  • 53 RBPs can affect the levels of IFI27L1.  








The Knockdown/knockout RNA-Seq assay for IFI27L1 is not available on ENCORE database.





53 RBPs can affect the gene expression of IFI27L1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
IFI27L1ENSG00000165948.650.2801093.63390-0.897003.019602.38900HepG2ACO1
IFI27L1ENSG00000165948.6103.10890156.48730-0.601902.173601.55160HepG2AUH
IFI27L1ENSG00000165948.612.8980052.13920-2.015204.735803.97900HepG2BOP1
IFI27L1ENSG00000165948.6152.2249085.552700.831202.853901.86270HepG2CCAR1
IFI27L1ENSG00000165948.625.2084093.60890-1.892708.838207.77910HepG2CKAP4
IFI27L1ENSG00000165948.672.76320135.73540-0.899502.639402.00970HepG2CELF1
IFI27L1ENSG00000165948.6119.5513072.198000.727502.138801.61000HepG2EIF2S1
IFI27L1ENSG00000165948.638.0658077.68140-1.029102.207001.58990HepG2EIF4B
IFI27L1ENSG00000165948.680.26270179.66820-1.162506.381505.53060HepG2ETF1
IFI27L1ENSG00000165948.640.9231091.49290-1.160704.007503.00330HepG2EWSR1
IFI27L1ENSG00000165948.6133.5707069.976500.932603.278802.06020HepG2FUS
IFI27L1ENSG00000165948.6135.4996080.496200.751202.432401.78200HepG2FXR1
IFI27L1ENSG00000165948.638.6578075.60600-0.967702.204001.57530HepG2HNRNPK
IFI27L1ENSG00000165948.6137.6924073.170100.912003.643002.71620HepG2MSI2
IFI27L1ENSG00000165948.677.35420138.11360-0.836302.866102.26050HepG2PUF60
IFI27L1ENSG00000165948.660.11690150.16940-1.320706.831706.10330HepG2RBM22
IFI27L1ENSG00000165948.654.6574098.41350-0.848402.224401.50270HepG2RPS2
IFI27L1ENSG00000165948.617.8830056.34680-1.655703.339302.48580HepG2RRP9
IFI27L1ENSG00000165948.6103.5965063.665600.702302.205901.61950HepG2SAFB2
IFI27L1ENSG00000165948.638.9672075.55550-0.955302.195901.59410HepG2SF3A3
IFI27L1ENSG00000165948.620.6359051.24390-1.312202.532901.85600HepG2SF3B1
IFI27L1ENSG00000165948.648.0996089.03530-0.888402.483301.91830HepG2SF3B4
IFI27L1ENSG00000165948.695.22030169.61090-0.832903.961403.39330HepG2SRFBP1
IFI27L1ENSG00000165948.6201.5202092.928701.116606.500405.84940HepG2SRSF1
IFI27L1ENSG00000165948.667.68480136.39020-1.010804.153703.41550HepG2SRSF5
IFI27L1ENSG00000165948.644.9560075.59820-0.749801.899401.42630HepG2SRSF9
IFI27L1ENSG00000165948.6139.8692083.514400.743902.840602.27290HepG2TAF15
IFI27L1ENSG00000165948.623.0614050.47900-1.130202.131401.48310HepG2TARDBP
IFI27L1ENSG00000165948.636.1641077.31710-1.096202.382501.79560HepG2U2AF1
IFI27L1ENSG00000165948.627.2266075.84550-1.478002.328101.43100HepG2U2AF2
IFI27L1ENSG00000165948.694.1076048.570300.954103.176802.46570HepG2ZC3H8
IFI27L1ENSG00000165948.626.1572073.69400-1.494305.124604.43770HepG2ZNF622
IFI27L1ENSG00000165948.676.98730129.87140-0.754402.503401.38660K562AARS
IFI27L1ENSG00000165948.6187.00520320.92490-0.779204.638402.96310K562APOBEC3C
IFI27L1ENSG00000165948.6119.5001069.511000.781602.496301.74950K562CPSF6
IFI27L1ENSG00000165948.6107.56210202.22810-0.910805.585804.70760K562DDX47
IFI27L1ENSG00000165948.6158.4543093.484900.761203.109502.20650K562FIP1L1
IFI27L1ENSG00000165948.6115.02850216.44510-0.912005.533804.71910K562FXR1
IFI27L1ENSG00000165948.664.86460156.54500-1.271102.050801.45560K562G3BP2
IFI27L1ENSG00000165948.6345.79540248.972300.473802.134901.46540K562GRSF1
IFI27L1ENSG00000165948.697.80140207.21060-1.083205.871404.00130K562HNRNPK
IFI27L1ENSG00000165948.6133.1646076.895400.792102.662201.74970K562HNRNPM
IFI27L1ENSG00000165948.6179.51760262.39410-0.547602.931002.01160K562HNRNPU
IFI27L1ENSG00000165948.6300.19470207.602200.532002.251901.35470K562IGF2BP2
IFI27L1ENSG00000165948.6227.98620138.510400.718902.483101.71630K562MTPAP
IFI27L1ENSG00000165948.6233.39230153.887700.600803.309902.50020K562NSUN2
IFI27L1ENSG00000165948.6123.95600194.01090-0.646302.747401.77100K562PCBP2
IFI27L1ENSG00000165948.6158.29390106.127800.576702.134401.41830K562PPIG
IFI27L1ENSG00000165948.695.65840164.57080-0.782703.044502.25650K562PRPF8
IFI27L1ENSG00000165948.6152.65340211.87950-0.473002.063601.47490K562PTBP1
IFI27L1ENSG00000165948.6161.73530396.82380-1.2949010.969409.33010K562PUF60
IFI27L1ENSG00000165948.6141.40370203.10760-0.522402.195001.45010K562RBM22
IFI27L1ENSG00000165948.6221.90620151.862400.547102.730401.92070K562SF3A3
IFI27L1ENSG00000165948.6252.23980179.772600.488502.547301.42790K562SRSF7
IFI27L1ENSG00000165948.687.81280140.00450-0.673002.394301.63130K562SYNCRIP
IFI27L1ENSG00000165948.6280.12170202.773100.466102.181601.46260K562TIA1
IFI27L1ENSG00000165948.6229.06880163.171100.489302.406001.73450K562UPF1
IFI27L1ENSG00000165948.6246.13790139.619100.817905.107903.90180K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for IFI27L1 is not available on ENCORE database.





9 RBPs can affect the splicing of IFI27L1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEIFI27L1ENSG00000165948.6chr14+945638409456402494563201945633119456708494567117-0.253000.000000.00000excludedK562SRSF1
SEIFI27L1ENSG00000165948.6chr14+945638409456402494563201945633119456708494567117-0.304000.000450.04542excludedHepG2SRSF7
SEIFI27L1ENSG00000165948.6chr14+945638409456402494563201945633119456708494567117-0.274000.000270.02173excludedHepG2NCBP2
SEIFI27L1ENSG00000165948.6chr14+9456384094564024945632019456331194567084945671170.225000.000760.08691includedK562LARP4
SEIFI27L1ENSG00000165948.6chr14+945638409456402494563201945633119456708494567117-0.172000.003020.06039excludedHepG2SRSF1
SEIFI27L1ENSG00000165948.6chr14+9456383794564024945632329456331194567084945671170.139000.000140.08296includedK562PUM2
SEIFI27L1ENSG00000165948.6chr14+945670849456711794563232945633119456882294569055-0.466000.000010.00074excludedK562TARDBP
A5SSIFI27L1ENSG00000165948.6chr14+945682139456840594568213945683219456882294569055-0.267000.000520.06327shorterK562RBM22
MXEIFI27L1ENSG00000165948.6chr14+9456708494567117945681599456832194563186945633119456882294569055-0.415000.000310.013962includedK562PPIL4
MXEIFI27L1ENSG00000165948.6chr14+9456708494567117945681599456840594563252945633119456882294569055-0.305000.002700.082322includedK562AKAP8L

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for IFI27L1 is not avaliable on ENCORE database.