HINFP

General Information

Gene Name       : HINFP
Gene ID             : ENSG00000172273.12
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: HINFP)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878HINFPENSG00000172273.1211.4112.6412.03ENCSR000AEF
HepG2HINFPENSG00000172273.1213.1111.1512.13ENCSR985KAT
K562HINFPENSG00000172273.1215.5412.8814.21ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for HINFP is not avaliable on ENCORE database.



Proteins bound to RNA
  • HINFP RNA is bound by 3 proteins.  







eCLIP assay for HINFP is not avaliable on ENCORE database.





3 proteins are bound to HINFP RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr11118997615118997674+3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal3.823594.00320K562AQR
chr11119005476119005582+3'-UTR3.746813.43253K562YBX3
chr11119005754119005843+3'-UTR,polyA_site5.7077714.19740K562CSTF2T
chr11119006128119006185+3'-UTR4.081573.70058K562CSTF2T
chr11119003171119003237+CDS,intron-Proximal4.360596.99120K562AQR
chr11118992349118992396+intron-Proximal4.623633.62536K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for HINFP is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for HINFP is not available on ENCORE database.

  • 46 RBPs can affect the levels of HINFP.  








The Knockdown/knockout RNA-Seq assay for HINFP is not available on ENCORE database.





46 RBPs can affect the gene expression of HINFP :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
HINFPENSG00000172273.8408.49960304.879300.422002.991702.36370HepG2ACO1
HINFPENSG00000172273.8367.58020217.446400.757305.290104.49630HepG2BOP1
HINFPENSG00000172273.8465.39710337.021900.465502.523201.78010HepG2CIRBP
HINFPENSG00000172273.8446.29890304.770000.550205.001604.15600HepG2CKAP4
HINFPENSG00000172273.8531.25510374.789700.503202.838202.19140HepG2EIF4A3
HINFPENSG00000172273.8705.72150565.407200.319702.394201.82740HepG2ETF1
HINFPENSG00000172273.8442.22480297.883400.569904.099903.08420HepG2EWSR1
HINFPENSG00000172273.8281.28380406.25870-0.530402.675801.50890HepG2KHDRBS1
HINFPENSG00000172273.8512.65780389.362400.396801.926901.39300HepG2NCBP2
HINFPENSG00000172273.8344.29250490.42580-0.510403.718302.83140HepG2NOL12
HINFPENSG00000172273.8486.33150344.191000.498604.189503.47010HepG2PCBP1
HINFPENSG00000172273.8227.66250301.32420-0.404402.110901.46030HepG2PPIL4
HINFPENSG00000172273.8287.58130468.17760-0.703105.417404.61850HepG2PUF60
HINFPENSG00000172273.8758.06530472.573600.681704.397203.78380HepG2RBM22
HINFPENSG00000172273.8481.04000389.770600.303401.759301.30740HepG2NELFE
HINFPENSG00000172273.8268.71530188.028200.515002.393101.81650HepG2RPS19
HINFPENSG00000172273.8229.07520300.86060-0.393302.111901.53620HepG2SAFB2
HINFPENSG00000172273.8637.53040331.610100.942907.634306.47850HepG2SF3A3
HINFPENSG00000172273.8323.14750213.769000.596003.183302.42820HepG2SF3B1
HINFPENSG00000172273.8493.06580364.628000.435303.129302.50570HepG2SF3B4
HINFPENSG00000172273.8334.29630448.96530-0.425502.955202.23230HepG2SLBP
HINFPENSG00000172273.8775.33930533.750700.538606.251805.58210HepG2SRFBP1
HINFPENSG00000172273.8439.16020309.638500.504104.160903.50970HepG2SRSF9
HINFPENSG00000172273.8218.91240331.20570-0.597404.309703.63630HepG2TRIM56
HINFPENSG00000172273.8446.66250293.741400.604503.667502.94830HepG2U2AF1
HINFPENSG00000172273.8721.60650537.320200.425302.920801.65790K562ABCF1
HINFPENSG00000172273.8824.40460638.476900.368603.469002.84670K562AGGF1
HINFPENSG00000172273.8897.36430664.363300.433603.304502.58890K562AKAP8L
HINFPENSG00000172273.82120.17160751.503301.4962038.9660036.97300K562AQR
HINFPENSG00000172273.8633.54830429.987800.559104.082002.95600K562EFTUD2
HINFPENSG00000172273.8646.71320460.334200.490302.878001.82260K562EIF3D
HINFPENSG00000172273.8650.31750491.567500.403702.774201.95150K562EIF4A3
HINFPENSG00000172273.8233.28600395.57330-0.761804.555703.59910K562G3BP2
HINFPENSG00000172273.8637.62660445.113900.518403.969203.26930K562HNRNPC
HINFPENSG00000172273.8704.58220553.005700.349402.379101.40590K562HNRNPL
HINFPENSG00000172273.8912.18530705.058400.371502.718801.90190K562KIF1C
HINFPENSG00000172273.8636.19210508.625900.322802.701701.96360K562NSUN2
HINFPENSG00000172273.8656.59670414.604900.663202.548101.60850K562PABPN1
HINFPENSG00000172273.8638.68480482.631000.404102.576401.63330K562PCBP2
HINFPENSG00000172273.8592.86890438.591700.434702.678701.87470K562PPIG
HINFPENSG00000172273.8282.73740527.04720-0.8985010.509509.27300K562PTBP1
HINFPENSG00000172273.81264.417201006.068400.329602.282401.54170K562PUF60
HINFPENSG00000172273.8840.66540658.872000.351402.207901.71150K562PUS1
HINFPENSG00000172273.8840.41500641.966600.388503.447802.79760K562RBM15
HINFPENSG00000172273.8752.31590501.895900.583906.979005.72980K562SF3A3
HINFPENSG00000172273.8542.08070411.050600.399102.187101.42790K562SF3B4
HINFPENSG00000172273.8714.20470435.455900.713702.688701.48360K562SNRNP200
HINFPENSG00000172273.8677.54190514.204300.397903.750102.67960K562SRPK2
HINFPENSG00000172273.8408.81510517.32000-0.339602.012601.31260K562SYNCRIP
HINFPENSG00000172273.8630.31400461.467300.449703.454502.47900K562WDR3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for HINFP is not available on ENCORE database.





4 RBPs can affect the splicing of HINFP :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEHINFPENSG00000172273.8chr11+119002952119003007119002539119002692119003205119003283-0.102000.001990.05326excludedK562AKAP8L
SEHINFPENSG00000172273.8chr11+119002952119003007119002539119002692119003205119003283-0.093000.002710.07141excludedK562UTP18
SEHINFPENSG00000172273.8chr11+1190029521190030071190025391190026921190032051190032830.102000.001080.09366includedK562CPSF6
A3SSHINFPENSG00000172273.8chr11+1190031751190032831190032051190032831190025391190026920.116000.009090.04873longerK562AQR
A3SSHINFPENSG00000172273.8chr11+1190025141190026371190025391190026371190019191190023560.091000.002590.01618longerK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for HINFP is not avaliable on ENCORE database.