HERC2P9

General Information

Gene Name       : HERC2P9
Gene ID             : ENSG00000206149.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: HERC2P9)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878HERC2P9ENSG00000206149.1015.9413.8314.88ENCSR000AEF
HepG2HERC2P9ENSG00000206149.1015.9023.7819.84ENCSR985KAT
K562HERC2P9ENSG00000206149.1032.0736.6234.34ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for HERC2P9 is not avaliable on ENCORE database.



Proteins bound to RNA
  • HERC2P9 RNA is bound by 7 proteins.  







eCLIP assay for HERC2P9 is not avaliable on ENCORE database.





7 proteins are bound to HERC2P9 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr152883629328836376+intron-Distal3.299506.55061K562EXOSC5
chr152883633528836394+intron-Distal3.520134.32964K562HNRNPM
chr152890060428900688+intron-Distal,intron-Proximal4.401644.67744K562BUD13
chr152890246228902587+intron-Distal,intron-Proximal6.0507814.10840K562PRPF8
chr152889788628897960+intron-Distal5.470179.02011K562EIF4G2
chr152889772628897803+intron-Distal5.475926.10540K562EIF4G2
chr152890247928902598+intron-Distal,intron-Proximal3.845624.93120K562KHSRP
chr152890381828903914+intron-Proximal4.160683.16051HepG2PPIG
chr152890054828900615+intron-Proximal3.042183.20348K562PRPF8
chr152890244528902510+intron-Proximal5.607708.38577HepG2PRPF8
chr152890053828900605+intron-Proximal3.344674.22621HepG2PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for HERC2P9 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for HERC2P9 is not available on ENCORE database.

  • 57 RBPs can affect the levels of HERC2P9.  








The Knockdown/knockout RNA-Seq assay for HERC2P9 is not available on ENCORE database.





57 RBPs can affect the gene expression of HERC2P9 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
HERC2P9ENSG00000206149.6327.00890484.12550-0.566102.992602.44170HepG2AKAP1
HERC2P9ENSG00000206149.6635.16920467.121600.443203.004002.38320HepG2BOP1
HERC2P9ENSG00000206149.6507.74510382.941700.406902.009301.49450HepG2EIF2S1
HERC2P9ENSG00000206149.6688.43340423.162300.702005.401104.50960HepG2EIF4A3
HERC2P9ENSG00000206149.6634.92050412.071400.623603.481102.71280HepG2EIF4B
HERC2P9ENSG00000206149.6685.39290525.182500.384002.510601.46990HepG2ESF1
HERC2P9ENSG00000206149.6497.47590293.565000.760806.654405.46620HepG2FUBP3
HERC2P9ENSG00000206149.6671.29410396.102000.761006.435405.44250HepG2G3BP1
HERC2P9ENSG00000206149.6562.94410420.582300.420502.326301.51350HepG2G3BP2
HERC2P9ENSG00000206149.6640.71820401.212900.675205.569404.60500HepG2HNRNPK
HERC2P9ENSG00000206149.6582.26300402.610200.532203.459402.71240HepG2IGF2BP2
HERC2P9ENSG00000206149.6681.29020404.992300.750305.245403.82510HepG2KHSRP
HERC2P9ENSG00000206149.6618.68790427.203300.534203.451102.71770HepG2MAGOH
HERC2P9ENSG00000206149.6591.23640439.683600.427202.301101.72100HepG2NCBP2
HERC2P9ENSG00000206149.6518.68580391.505700.405702.097501.46040HepG2PABPC4
HERC2P9ENSG00000206149.6491.22890383.620200.356602.504101.91990HepG2PCBP1
HERC2P9ENSG00000206149.6440.21480331.663300.408402.066201.36390HepG2PRPF8
HERC2P9ENSG00000206149.6666.75190422.738500.657306.960806.03500HepG2QKI
HERC2P9ENSG00000206149.6558.96200383.676200.542804.304303.47840HepG2RBM25
HERC2P9ENSG00000206149.6592.77050434.424600.448303.706903.09870HepG2NELFE
HERC2P9ENSG00000206149.6589.27880404.633300.542205.270904.45410HepG2RECQL
HERC2P9ENSG00000206149.6746.50240406.389700.8772013.7784012.61440HepG2SF3B4
HERC2P9ENSG00000206149.6431.23160345.116400.321302.089701.59620HepG2SRSF9
HERC2P9ENSG00000206149.6905.93030739.445700.292902.815202.29950HepG2SSB
HERC2P9ENSG00000206149.6608.33720381.318100.673807.523506.67410HepG2TAF15
HERC2P9ENSG00000206149.6650.34340452.166200.524203.843103.00430HepG2TARDBP
HERC2P9ENSG00000206149.6480.28310350.342500.455003.215202.31850HepG2TIA1
HERC2P9ENSG00000206149.6612.91300441.613800.472803.735003.17250HepG2TIAL1
HERC2P9ENSG00000206149.6386.15870252.774400.611204.173103.24030HepG2UCHL5
HERC2P9ENSG00000206149.6612.00030439.164700.478705.042404.18140HepG2ZC3H8
HERC2P9ENSG00000206149.61775.653801058.086100.746803.597502.60410K562BOP1
HERC2P9ENSG00000206149.63969.205003073.201900.369005.450804.07910K562CELF1
HERC2P9ENSG00000206149.62353.482201949.979000.271203.617802.88490K562DDX47
HERC2P9ENSG00000206149.61355.960701071.294900.339902.852802.01910K562EIF4A3
HERC2P9ENSG00000206149.62929.354002499.725500.228702.838601.88820K562EIF4G2
HERC2P9ENSG00000206149.61520.821401144.823300.409602.823201.95980K562FMR1
HERC2P9ENSG00000206149.61355.176901073.930100.335501.977801.30290K562GPKOW
HERC2P9ENSG00000206149.61633.390402019.28100-0.306002.643101.90360K562GRSF1
HERC2P9ENSG00000206149.61532.104501069.835300.518006.056405.20680K562HNRNPC
HERC2P9ENSG00000206149.61353.306001856.05060-0.455704.436403.43370K562HSPD1
HERC2P9ENSG00000206149.61285.51390917.259300.486802.616201.71240K562KRR1
HERC2P9ENSG00000206149.61514.916601861.04430-0.296902.804001.88870K562MBNL1
HERC2P9ENSG00000206149.61812.069801377.305300.395706.272005.09690K562MTPAP
HERC2P9ENSG00000206149.6700.076601037.60550-0.567702.919901.57910K562NONO
HERC2P9ENSG00000206149.61870.049801530.379800.289104.713303.77370K562NSUN2
HERC2P9ENSG00000206149.61295.667401061.716000.287202.287801.55970K562POLR2G
HERC2P9ENSG00000206149.61247.370201554.20570-0.317302.282301.53790K562PPIG
HERC2P9ENSG00000206149.6664.946401024.89390-0.624205.889404.79290K562PRPF8
HERC2P9ENSG00000206149.6790.048901162.66430-0.557406.824705.81680K562PTBP1
HERC2P9ENSG00000206149.61888.441501552.492400.282501.977801.50410K562PUS1
HERC2P9ENSG00000206149.6688.26370875.49030-0.347102.649101.68000K562RCC2
HERC2P9ENSG00000206149.62355.611101509.990300.6415014.4081012.65730K562SF3A3
HERC2P9ENSG00000206149.61454.450701021.702600.509404.082002.88630K562SF3B1
HERC2P9ENSG00000206149.61364.320201009.709700.434104.867003.71840K562SF3B4
HERC2P9ENSG00000206149.6941.188801139.79290-0.276201.955101.34780K562SRSF1
HERC2P9ENSG00000206149.61333.64010992.398400.426303.157302.07010K562SUPV3L1
HERC2P9ENSG00000206149.6916.494001112.73290-0.279902.092301.38780K562TIA1
HERC2P9ENSG00000206149.61217.03700972.196900.324002.803401.99440K562U2AF2
HERC2P9ENSG00000206149.61989.668001622.688600.294003.889803.05010K562UPF1
HERC2P9ENSG00000206149.61740.541801334.856700.382802.651001.47770K562UTP3
HERC2P9ENSG00000206149.62009.684701388.492500.533307.301005.83960K562WDR3
HERC2P9ENSG00000206149.62066.542001443.809000.5172012.0401010.41860K562WDR43
HERC2P9ENSG00000206149.62658.297102007.247200.405204.350403.22930K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for HERC2P9 is not available on ENCORE database.





7 RBPs can affect the splicing of HERC2P9 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEHERC2P9ENSG00000206149.6chr15+2890064028900837289004182890056628900941289011720.575000.000000.00670includedK562IGF2BP2
SEHERC2P9ENSG00000206149.6chr15+2890064028900837289004182890056628900941289011720.646000.000030.00176includedK562AKAP8L
SEHERC2P9ENSG00000206149.6chr15+289006402890083728900418289005662890094128901172-0.586000.000250.01301excludedK562FXR1
SEHERC2P9ENSG00000206149.6chr15+2890064028900837289004182890056628900941289011720.424000.003480.07107includedK562AGGF1
SEHERC2P9ENSG00000206149.6chr15+2890064028900837289004182890056628900941289011720.474000.000010.00257includedK562ZC3H8
A3SSHERC2P9ENSG00000206149.6chr15+2889400128894213288940252889421328887634288877100.117000.012080.06212longerK562AQR
A5SSHERC2P9ENSG00000206149.6chr15+289004182890083728900418289005662890094128901172-0.649000.000040.00640shorterK562FXR1
A5SSHERC2P9ENSG00000206149.6chr15+2890041828900837289004182890056628900941289011720.522000.000030.02996longerK562IGF2BP2
A5SSHERC2P9ENSG00000206149.6chr15+289004182890083728900418289005662890094128901172-0.271000.000310.02158shorterK562SRSF1
A5SSHERC2P9ENSG00000206149.6chr15+2890041828900837289004182890056628900941289011720.657000.000160.01875longerK562AKAP8L

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for HERC2P9 is not avaliable on ENCORE database.