GP1BB

General Information

Gene Name       : GP1BB
Gene ID             : ENSG00000203618.5
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: GP1BB)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878GP1BBENSG00000203618.50.000.000.00ENCSR000AEF
HepG2GP1BBENSG00000203618.50.040.000.02ENCSR985KAT
K562GP1BBENSG00000203618.510.951.106.02ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for GP1BB is not avaliable on ENCORE database.



Proteins bound to RNA
  • GP1BB RNA is bound by 35 proteins.  







eCLIP assay for GP1BB is not avaliable on ENCORE database.





35 proteins are bound to GP1BB RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr221971217419712216+3'-UTR3.283894.46348K562DDX52
chr221971209219712137+3'-UTR3.551715.35486K562UPF1
chr221971215419712197+3'-UTR3.792638.34503K562PABPC4
chr221971205619712148+3'-UTR3.078778.80749K562DDX55
chr221971221819712269+3'-UTR4.0587811.76933K562PABPC4
chr221971043819710522+3'-UTR,5'-UTR4.2811815.20799K562UPF1
chr221971103519711064+3'-UTR,5'-UTR3.059525.26460K562NONO
chr221971046919710494+3'-UTR,5'-UTR3.378937.24530K562BUD13
chr221971087519710926+3'-UTR,5'-UTR4.5540415.83494K562NONO
chr221971086319710920+3'-UTR,5'-UTR3.938456.16252K562PHF6
chr221971044719710502+3'-UTR,5'-UTR4.724266.01451K562PCBP1
chr221971047419710512+3'-UTR,5'-UTR3.744935.36267K562PHF6
chr221971083119710875+3'-UTR,5'-UTR,polyA_site3.9162113.92369K562NONO
chr221971057619710605+3'-UTR,5'-UTR3.267253.08948K562DDX55
chr221971047919710511+3'-UTR,5'-UTR3.557445.14244K562DROSHA
chr221971107019711104+3'-UTR,5'-UTR,CDS,intron-Proximal4.1859623.17805K562DDX3X
chr221971085219710930+3'-UTR,5'-UTR3.084924.24867K562EWSR1
chr221971092619710964+3'-UTR,5'-UTR3.674146.75245K562NONO
chr221971144319711493+3'-UTR,CDS5.2474113.24886K562GEMIN5
chr221971147119711535+3'-UTR,CDS4.135595.37099K562FXR2
chr221971187719711901+3'-UTR,CDS4.087883.60290K562AKAP8L
chr221971185219711922+3'-UTR,CDS4.8712710.40953K562RBM15
chr221971139019711463+3'-UTR,CDS3.3405714.88303K562TROVE2
chr221971139719711465+3'-UTR,CDS3.8074240.74326K562DDX3X
chr221971170019711846+3'-UTR,CDS3.165265.90389K562SND1
chr221971192619711978+3'-UTR,CDS3.321927.42660K562PABPC4
chr221971163519711757+3'-UTR,CDS4.149386.72527K562FXR2
chr221971184819711941+3'-UTR,CDS4.8971913.24886K562GEMIN5
chr221971137519711397+3'-UTR,CDS,intron-Proximal3.8526721.76601K562DDX3X
chr221971153419711589+3'-UTR,CDS3.246926.46110K562GEMIN5
chr221971158019711623+3'-UTR,CDS3.563444.68928K562RBM15
chr221971184619711932+3'-UTR,CDS3.977698.91754K562SND1
chr221971135219711395+3'-UTR,CDS,intron-Proximal5.1348112.17654K562AQR
chr221971168419711716+3'-UTR,CDS3.206204.82200K562LSM11
chr221971185419711926+3'-UTR,CDS3.460444.82661K562FXR2
chr221971189519711983+3'-UTR,CDS3.631543.01619K562FUS
chr221971109919711111+3'-UTR,CDS,intron-Proximal4.6778917.76861K562AQR
chr221971183019711933+3'-UTR,CDS4.391378.19380K562FMR1
chr221971168419711749+3'-UTR,CDS4.228458.24732K562GEMIN5
chr221971137919711454+3'-UTR,CDS5.476839.18426K562FXR2
chr221971184419711905+3'-UTR,CDS3.213706.44374K562DHX30
chr221971122619711302+intron-Distal,intron-Proximal3.060966.41023K562MTPAP
chr221971123619711322+intron-Distal,intron-Proximal3.230467.65663K562EFTUD2
chr221971125819711338+intron-Distal,intron-Proximal4.011795.01857K562SMNDC1
chr221971124519711273+intron-Distal3.674683.84192K562DDX52
chr221971122319711296+intron-Distal,intron-Proximal3.309734.41699K562ZC3H11A
chr221971124319711377+intron-Distal,intron-Proximal3.384476.00009K562SF3B4
chr221971121319711332+intron-Distal,intron-Proximal4.2562323.76336K562AQR
chr221971122519711299+intron-Distal,intron-Proximal3.070738.05533K562DDX24
chr221971122119711287+intron-Distal,intron-Proximal4.027456.10050K562WDR43
chr221971120919711336+intron-Distal,intron-Proximal3.266839.85814K562EWSR1
chr221971121819711325+intron-Distal,intron-Proximal4.4633012.69640K562UCHL5
chr221971121119711317+intron-Distal,intron-Proximal3.022176.41457K562FASTKD2
chr221971122319711325+intron-Distal,intron-Proximal3.9794914.86198K562NONO
chr221971123019711281+intron-Distal,intron-Proximal4.003527.27129K562AATF
chr221971121919711302+intron-Distal,intron-Proximal4.7437810.26114K562GEMIN5
chr221971123219711300+intron-Distal,intron-Proximal3.281694.79784K562METAP2
chr221971120719711289+intron-Distal,intron-Proximal3.319353.92909K562GRWD1
chr221971120719711303+intron-Distal,intron-Proximal3.479944.59673K562NCBP2
chr221971111119711143+intron-Proximal4.7800717.76861K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for GP1BB is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for GP1BB is not available on ENCORE database.

  • 59 RBPs can affect the levels of GP1BB.  








The Knockdown/knockout RNA-Seq assay for GP1BB is not available on ENCORE database.





59 RBPs can affect the gene expression of GP1BB :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
GP1BBENSG00000203618.5709.81570446.357800.669108.832107.89340K562AGGF1
GP1BBENSG00000203618.5997.24340464.462801.102302.041001.47720K562AKAP8L
GP1BBENSG00000203618.5912.02110411.965601.146408.743506.45330K562APOBEC3C
GP1BBENSG00000203618.5911.25850487.347200.902802.292801.46900K562ATP5C1
GP1BBENSG00000203618.5227.2564097.900601.214802.713701.41870K562BCCIP
GP1BBENSG00000203618.5297.0668094.630701.6503017.6612015.23320K562BCLAF1
GP1BBENSG00000203618.5188.99540341.70900-0.854405.733604.46490K562BOP1
GP1BBENSG00000203618.5995.70610215.722002.2064013.0817010.23750K562CCAR1
GP1BBENSG00000203618.5712.64630398.824300.837305.259003.18440K562CKAP4
GP1BBENSG00000203618.5877.93490536.843800.709503.193701.99830K562CPEB4
GP1BBENSG00000203618.5354.8417071.791602.305204.038202.73010K562CSTF2
GP1BBENSG00000203618.5220.3698082.936301.409805.870803.94360K562DDX27
GP1BBENSG00000203618.5229.06150110.744001.048403.554601.62740K562DDX51
GP1BBENSG00000203618.5746.26120241.538001.627304.225002.52040K562DHX30
GP1BBENSG00000203618.5378.24550499.74920-0.401902.666601.81050K562DKC1
GP1BBENSG00000203618.5524.17400106.036302.305402.758701.48190K562EEF2
GP1BBENSG00000203618.5239.60540102.396701.226402.383201.53760K562EFTUD2
GP1BBENSG00000203618.5999.14970322.223601.6325018.5886016.96380K562EIF2S2
GP1BBENSG00000203618.5379.57380219.411400.790602.545201.58400K562EIF3A
GP1BBENSG00000203618.5107.1080046.446801.205304.155503.18880K562EIF3G
GP1BBENSG00000203618.5357.31630257.537300.472303.011301.79120K562EIF4B
GP1BBENSG00000203618.5727.36730388.082600.9062010.279008.52460K562FIP1L1
GP1BBENSG00000203618.5226.10230369.69600-0.709404.800503.67140K562FMR1
GP1BBENSG00000203618.5148.72420269.80630-0.859304.528402.19800K562FUBP3
GP1BBENSG00000203618.5500.36100297.423500.750407.578606.64340K562FXR1
GP1BBENSG00000203618.51.1235010.99560-3.290902.089601.48670K562G3BP2
GP1BBENSG00000203618.51138.80470429.419801.407007.667106.39520K562GRSF1
GP1BBENSG00000203618.5545.61630184.271801.566006.587505.70640K562HNRNPC
GP1BBENSG00000203618.5294.8382076.925901.938304.550503.10160K562IGF2BP2
GP1BBENSG00000203618.5155.8207078.222700.994105.141203.42320K562IGF2BP3
GP1BBENSG00000203618.5166.54140296.21280-0.830804.188203.01710K562KRR1
GP1BBENSG00000203618.5278.6206080.793301.7859019.3292016.94530K562MAGOH
GP1BBENSG00000203618.5619.68420471.833500.393203.108301.95100K562MAK16
GP1BBENSG00000203618.5251.2196080.621401.639604.083802.94670K562MATR3
GP1BBENSG00000203618.5172.6939079.000101.128206.636304.48830K562PCBP1
GP1BBENSG00000203618.5389.14400294.141800.403702.042801.35480K562POLR2G
GP1BBENSG00000203618.5682.77530440.492800.632202.547201.76530K562PPIG
GP1BBENSG00000203618.5303.9723099.646101.6090010.190408.74650K562PRPF8
GP1BBENSG00000203618.5261.9602078.499701.7385018.3839016.74530K562PTBP1
GP1BBENSG00000203618.5223.64470542.21100-1.277603.989902.68770K562PUM1
GP1BBENSG00000203618.5813.52980230.196501.8212021.4537017.40590K562RBFOX2
GP1BBENSG00000203618.5620.96230448.796800.468304.125603.41790K562RBM15
GP1BBENSG00000203618.5273.9989075.243001.8644019.7909017.32630K562RBM22
GP1BBENSG00000203618.5184.1486073.369701.327505.424103.27390K562RBM34
GP1BBENSG00000203618.5145.7635079.188000.880203.827202.51600K562NELFE
GP1BBENSG00000203618.5197.1797052.924101.897407.481905.72660K562RPS3
GP1BBENSG00000203618.5392.34790750.03150-0.934806.000104.83640K562SF3A3
GP1BBENSG00000203618.5168.00000329.92530-0.973706.193404.70600K562SF3B1
GP1BBENSG00000203618.531.3111011.400401.457502.304601.52640K562SF3B4
GP1BBENSG00000203618.5123.0928076.961800.677402.090901.46610K562SRSF1
GP1BBENSG00000203618.5289.0942051.067202.5010024.9166021.36870K562SRSF4
GP1BBENSG00000203618.5168.7876072.699301.215104.046502.73500K562SRSF5
GP1BBENSG00000203618.5278.33870509.24790-0.871503.877802.24720K562SSRP1
GP1BBENSG00000203618.5184.1085096.358300.934003.120702.04120K562SUPV3L1
GP1BBENSG00000203618.50.0000010.79070-99999.999993.062301.49820K562TAF15
GP1BBENSG00000203618.5597.2737077.877602.9390021.2245018.87640K562TARDBP
GP1BBENSG00000203618.5350.9512075.125102.2238030.6996027.74360K562TIA1
GP1BBENSG00000203618.5198.2933073.750301.426809.408007.03540K562TRA2A
GP1BBENSG00000203618.5204.08470102.043800.999903.635302.45550K562UCHL5
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for GP1BB is not available on ENCORE database.






No RBPs affect the alternative splcing events of GP1BB on ENCORE database.





The Knockdown/knockout RNA-Seq assay for GP1BB is not avaliable on ENCORE database.