GK5

General Information

Gene Name       : GK5
Gene ID             : ENSG00000175066.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: GK5)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878GK5ENSG00000175066.158.478.528.50ENCSR000AEF
HepG2GK5ENSG00000175066.153.787.015.39ENCSR985KAT
K562GK5ENSG00000175066.157.167.467.31ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for GK5 is not avaliable on ENCORE database.



Proteins bound to RNA
  • GK5 RNA is bound by 9 proteins.  







eCLIP assay for GK5 is not avaliable on ENCORE database.





9 proteins are bound to GK5 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr3141904517141904591-3'-UTR,CDS,intron-Distal,intron-Proximal4.392347.15298K562AQR
chr3141900313141900403-3'-UTR,CDS,intron-Distal,intron-Proximal3.404329.87923K562DDX24
chr3141904526141904586-3'-UTR,CDS,intron-Distal,intron-Proximal3.184883.18246K562PRPF8
chr3141900305141900384-3'-UTR,CDS,intron-Distal,intron-Proximal3.810054.93978HepG2BCLAF1
chr3141900309141900401-3'-UTR,CDS,intron-Distal,intron-Proximal3.308886.80450K562UCHL5
chr3141944344141944420-5'-UTR,intron-Distal,intron-Proximal3.380933.77385HepG2NCBP2
chr3141944290141944398-5'-UTR,CDS,intron-Distal,intron-Proximal4.448995.47892K562DDX3X
chr3141904769141904832-CDS,intron-Distal,intron-Proximal3.9557313.82711K562DDX24
chr3141904758141904868-CDS,intron-Distal,intron-Proximal5.137955.40008K562SF3B4
chr3141905292141905356-CDS,intron-Distal,intron-Proximal4.265486.28735K562DDX24
chr3141917814141917960-intron-Distal,intron-Proximal4.185104.31512K562KHSRP
chr3141919579141919963-intron-Distal3.444139.04868K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for GK5 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for GK5 is not available on ENCORE database.

  • 73 RBPs can affect the levels of GK5.  








The Knockdown/knockout RNA-Seq assay for GK5 is not available on ENCORE database.





73 RBPs can affect the gene expression of GK5 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
GK5ENSG00000175066.11561.19540314.324300.836106.066805.31350HepG2AKAP1
GK5ENSG00000175066.11285.93550207.300800.463902.095601.30890HepG2BCLAF1
GK5ENSG00000175066.11196.16260296.50580-0.596003.128302.49590HepG2BOP1
GK5ENSG00000175066.11500.24910381.501800.390902.567901.94430HepG2CELF1
GK5ENSG00000175066.11299.96930213.780500.488602.441801.52000HepG2DHX30
GK5ENSG00000175066.11163.21550219.66580-0.428502.036701.46040HepG2DNAJC2
GK5ENSG00000175066.11188.88710302.23710-0.678202.351001.49880HepG2EEF2
GK5ENSG00000175066.11469.55250248.675000.916907.381406.44820HepG2EIF2S1
GK5ENSG00000175066.11458.53120267.537800.777204.425603.56650HepG2EIF4B
GK5ENSG00000175066.11369.25770551.26350-0.578105.205504.42770HepG2ETF1
GK5ENSG00000175066.11225.77070344.69530-0.610503.794502.81530HepG2EWSR1
GK5ENSG00000175066.11289.46420195.217900.568202.838901.55430HepG2FKBP4
GK5ENSG00000175066.11301.04240150.118301.003807.409706.15960HepG2FUBP3
GK5ENSG00000175066.11424.42290257.205000.722504.814303.94780HepG2G3BP1
GK5ENSG00000175066.11415.36640272.982100.605503.669602.63560HepG2G3BP2
GK5ENSG00000175066.11189.69280335.87550-0.824302.572501.59500HepG2GNB2L1
GK5ENSG00000175066.11495.97280314.815900.655702.993801.55180HepG2HLTF
GK5ENSG00000175066.11315.94660223.780800.497502.352501.75270HepG2HNRNPA1
GK5ENSG00000175066.11515.61980377.026900.451503.263002.25810HepG2HNRNPA2B1
GK5ENSG00000175066.11463.41500248.903300.896607.563206.46290HepG2HNRNPC
GK5ENSG00000175066.11402.40410260.311100.628303.848303.03660HepG2HNRNPK
GK5ENSG00000175066.11212.35430291.59160-0.457502.324901.65950HepG2IGF2BP1
GK5ENSG00000175066.11571.78440245.291001.220903.014701.98730HepG2IGF2BP3
GK5ENSG00000175066.11535.96300262.949901.027208.128206.32650HepG2KHSRP
GK5ENSG00000175066.11502.22000289.196500.796206.920005.69880HepG2MSI2
GK5ENSG00000175066.11411.34520285.454200.527002.713802.08640HepG2NCBP2
GK5ENSG00000175066.11437.26820261.092700.743905.108704.10480HepG2NSUN2
GK5ENSG00000175066.11403.70510254.281000.666804.199803.32160HepG2PABPC4
GK5ENSG00000175066.11378.40250234.073100.692906.174905.32340HepG2PCBP1
GK5ENSG00000175066.11511.48640238.200201.1024016.0259014.91800HepG2PTBP1
GK5ENSG00000175066.11213.33460388.33750-0.864206.076005.23760HepG2PUF60
GK5ENSG00000175066.11653.36640257.929601.3408017.7442016.35670HepG2QKI
GK5ENSG00000175066.11579.17490412.192300.490604.091803.07240HepG2RBM15
GK5ENSG00000175066.11310.98350460.75420-0.567204.712004.08160HepG2RBM22
GK5ENSG00000175066.11638.29300234.105501.4470023.4086021.55800HepG2RBM25
GK5ENSG00000175066.11381.73550265.075600.526103.612103.01050HepG2NELFE
GK5ENSG00000175066.11418.69060246.915200.761807.200806.27560HepG2RECQL
GK5ENSG00000175066.11224.45780319.00000-0.507102.686202.01060HepG2RPLP0
GK5ENSG00000175066.11153.87120238.73640-0.633702.657002.05340HepG2RPS19
GK5ENSG00000175066.11301.51480461.58090-0.614403.294502.55680HepG2SF3A3
GK5ENSG00000175066.11493.45760247.957500.9927012.3627011.25520HepG2SF3B4
GK5ENSG00000175066.11628.68350520.404900.272601.978701.53340HepG2SRFBP1
GK5ENSG00000175066.11297.28290210.586000.497302.031601.54420HepG2SRSF9
GK5ENSG00000175066.11448.85720280.489000.678203.179201.88350HepG2SUB1
GK5ENSG00000175066.11623.45480232.691501.4218026.1768024.68350HepG2TAF15
GK5ENSG00000175066.11205.62310393.27880-0.935504.001302.73400HepG2TBRG4
GK5ENSG00000175066.11437.42920213.764201.0329010.773109.15270HepG2TIA1
GK5ENSG00000175066.11195.51350305.68170-0.644803.185802.51430HepG2U2AF1
GK5ENSG00000175066.11506.34810295.122300.778704.532102.90530HepG2XRCC5
GK5ENSG00000175066.11550.21080450.208800.289302.125201.62760HepG2ZNF622
GK5ENSG00000175066.11699.648201082.24500-0.629309.802108.81660K562AGGF1
GK5ENSG00000175066.11931.104101189.24330-0.353002.698201.73230K562AKAP8
GK5ENSG00000175066.11897.581501126.12980-0.327301.946701.39590K562AKAP8L
GK5ENSG00000175066.11649.80260864.44940-0.411802.478601.91710K562AQR
GK5ENSG00000175066.11537.38920387.372400.472102.783601.90720K562BOP1
GK5ENSG00000175066.11756.11410514.936200.554105.313003.80360K562DDX3X
GK5ENSG00000175066.11903.873101211.76620-0.422905.050603.81470K562DKC1
GK5ENSG00000175066.11585.85950383.204800.612304.005002.73180K562EIF3D
GK5ENSG00000175066.11323.98500466.75670-0.526703.503402.53930K562FIP1L1
GK5ENSG00000175066.11385.93060559.46390-0.535704.866504.09490K562FXR1
GK5ENSG00000175066.11408.22330645.33140-0.660705.814404.71410K562GRSF1
GK5ENSG00000175066.11539.43550768.15820-0.510004.565203.17270K562HNRNPL
GK5ENSG00000175066.11498.54510335.798100.570002.993202.01800K562KRR1
GK5ENSG00000175066.11850.655501338.80320-0.654309.033007.19970K562MBNL1
GK5ENSG00000175066.11319.02840529.86730-0.731906.214704.90140K562PPIG
GK5ENSG00000175066.11237.13790348.23360-0.554302.705301.96400K562PRPF8
GK5ENSG00000175066.11675.060301148.41210-0.766609.745208.19080K562PUF60
GK5ENSG00000175066.11986.241201196.83590-0.279202.721801.77030K562PUM2
GK5ENSG00000175066.11883.44860547.471100.690303.919202.19510K562RAVER1
GK5ENSG00000175066.11796.818101088.15980-0.449604.806504.04490K562RBM15
GK5ENSG00000175066.11412.54580555.79500-0.430002.251401.35830K562RPS3
GK5ENSG00000175066.11473.35950654.11090-0.466603.664502.85660K562SRSF1
GK5ENSG00000175066.11351.45470536.64520-0.610603.960202.66740K562SRSF4
GK5ENSG00000175066.11468.39500337.229700.473902.595101.61380K562SUPV3L1
GK5ENSG00000175066.11511.76560638.59230-0.319402.065101.36550K562TIA1
GK5ENSG00000175066.11255.99700366.65740-0.518302.163901.34610K562TIAL1
GK5ENSG00000175066.11724.73400589.641600.297502.604101.78130K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for GK5 is not available on ENCORE database.





11 RBPs can affect the splicing of GK5 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEGK5ENSG00000175066.11chr3-141903552141904635141901764141901891141904770141904831-0.440000.000000.00001excludedK562SRSF1
SEGK5ENSG00000175066.11chr3-141905035141905109141904770141904831141905293141905355-0.366000.000290.00755excludedK562SF3B4
SEGK5ENSG00000175066.11chr3-141903552141904635141901764141901891141904770141904831-0.306000.001520.07775excludedHepG2AKAP1
SEGK5ENSG00000175066.11chr3-141903552141904635141901764141901891141904770141904831-0.503000.000000.00001excludedK562FXR1
SEGK5ENSG00000175066.11chr3-141903552141904635141901764141901891141904770141904831-0.357000.000790.05844excludedHepG2DDX3X
SEGK5ENSG00000175066.11chr3-141905035141905109141904770141904831141905293141905355-0.503000.000000.00023excludedK562U2AF1
SEGK5ENSG00000175066.11chr3-141903552141904635141901764141901891141904770141904831-0.478000.001510.03558excludedHepG2SRSF1
SEGK5ENSG00000175066.11chr3-1419035521419046351419017641419018911419047701419048310.255000.000340.03041includedK562HNRNPUL1
SEGK5ENSG00000175066.11chr3-141905035141905109141904770141904831141905293141905355-0.419000.000020.00064excludedK562U2AF2
SEGK5ENSG00000175066.11chr3-1419035521419046351419017641419018911419047701419048310.644000.000000.00017includedHepG2HNRNPC
SEGK5ENSG00000175066.11chr3-141903552141904635141901764141901891141904770141904831-0.334000.000130.00793excludedK562PTBP1
SEGK5ENSG00000175066.11chr3-1419035521419046351419017641419018911419047701419048310.288000.000660.09248includedK562NPM1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for GK5 is not avaliable on ENCORE database.