DTNBP1

General Information

Gene Name       : DTNBP1
Gene ID             : ENSG00000047579.19
Essential Gene : No

Functions

Localization

Domains (AlphaFold: DTNBP1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878DTNBP1ENSG00000047579.1913.8416.1514.99ENCSR000AEF
HepG2DTNBP1ENSG00000047579.1918.8416.1517.49ENCSR985KAT
K562DTNBP1ENSG00000047579.1929.4836.6933.09ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for DTNBP1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • DTNBP1 RNA is bound by 10 proteins.  







eCLIP assay for DTNBP1 is not avaliable on ENCORE database.





10 proteins are bound to DTNBP1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr61553348615533543-3'-UTR,CDS,intron-Distal3.205793.31745K562ZNF622
chr61562761615627707-5'-UTR,CDS,intron-Distal,intron-Proximal4.522404.90367K562ZNF622
chr61563796915638030-5'-UTR,CDS,intron-Distal,intron-Proximal4.607365.59615K562ZNF622
chr61565234115652371-5'-UTR,CDS,intron-Distal3.847073.04254K562UCHL5
chr61566313515663236-5'-UTR,intron-Distal,intron-Proximal4.096944.13073HepG2GTF2F1
chr61566311615663208-5'-UTR,intron-Distal,intron-Proximal4.627195.58865HepG2NCBP2
chr61566312715663214-5'-UTR,intron-Distal,intron-Proximal4.226676.00287K562GEMIN5
chr61566304415663112-5'-UTR,CDS,intron-Distal3.463304.40383K562UCHL5
chr61566311415663187-5'-UTR,intron-Distal,intron-Proximal3.283244.59873K562UCHL5
chr61566312015663260-5'-UTR,intron-Distal,intron-Proximal3.954435.82826HepG2PRPF4
chr61566309215663237-5'-UTR,CDS,intron-Distal,intron-Proximal3.396375.18217K562PUM1
chr61564448715644537-intron-Distal4.664774.48560K562EXOSC5
chr61564484915644878-intron-Distal4.422064.48623K562EXOSC5
chr61564669115646738-intron-Distal5.249738.36716K562EXOSC5
chr61564634315646377-intron-Distal4.155043.30696K562EXOSC5
chr61559231915592439-intron-Distal4.131304.79477K562KHSRP
chr61564583415645886-intron-Distal4.655044.80399K562EXOSC5
chr61554860915548689-intron-Distal,intron-Proximal4.043674.13603K562TARDBP
chr61558031715580418-intron-Distal3.278533.51696K562KHSRP
chr61564564715645712-intron-Distal5.5345410.34009K562EXOSC5
chr61564623915646287-intron-Distal4.814055.44433K562EXOSC5
chr61564703815647071-intron-Distal4.118213.59909K562EXOSC5
chr61564398415644020-intron-Distal4.053573.01456K562EXOSC5
chr61559216115592245-intron-Distal4.051783.92684K562KHSRP
chr61558422815584388-intron-Distal3.545314.56724K562KHSRP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for DTNBP1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for DTNBP1 is not available on ENCORE database.

  • 36 RBPs can affect the levels of DTNBP1.  








The Knockdown/knockout RNA-Seq assay for DTNBP1 is not available on ENCORE database.





36 RBPs can affect the gene expression of DTNBP1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
DTNBP1ENSG00000047579.15214.49630139.520000.620402.658101.60480HepG2AATF
DTNBP1ENSG00000047579.15436.95190285.643700.613203.225502.65680HepG2AKAP1
DTNBP1ENSG00000047579.15265.43080181.033200.552003.194602.37710HepG2AKAP8L
DTNBP1ENSG00000047579.15240.65500154.001000.643903.058902.34800HepG2DDX21
DTNBP1ENSG00000047579.15131.33760225.97770-0.782903.532602.86680HepG2EIF2S1
DTNBP1ENSG00000047579.15266.53460176.069700.598103.211102.31270HepG2EWSR1
DTNBP1ENSG00000047579.15280.38800168.556400.734103.442902.19540HepG2FUS
DTNBP1ENSG00000047579.15249.52760168.737200.564303.216002.56590HepG2HNRNPU
DTNBP1ENSG00000047579.15366.49980253.431000.532102.477401.87720HepG2MATR3
DTNBP1ENSG00000047579.15260.73310183.574900.506102.852802.23000HepG2PUS1
DTNBP1ENSG00000047579.15372.64520252.020600.564203.415102.73080HepG2QKI
DTNBP1ENSG00000047579.15287.31010154.003000.899603.818702.99490HepG2RAVER1
DTNBP1ENSG00000047579.15190.54580121.022400.654802.796102.17810HepG2RPS19
DTNBP1ENSG00000047579.15315.24510224.225400.491402.183201.58350HepG2SF3A3
DTNBP1ENSG00000047579.15180.75200261.67770-0.533802.890602.17510HepG2SLBP
DTNBP1ENSG00000047579.15412.90640252.858600.707405.802105.18000HepG2SRSF1
DTNBP1ENSG00000047579.15377.71120300.524700.329701.813801.37700HepG2SSB
DTNBP1ENSG00000047579.15217.02820145.274900.579002.332901.33680HepG2STIP1
DTNBP1ENSG00000047579.15443.20910306.428500.532304.563003.80090HepG2SUCLG1
DTNBP1ENSG00000047579.15258.20340163.953900.655103.747003.18380HepG2TIAL1
DTNBP1ENSG00000047579.1569.92530165.42580-1.242307.730506.86510HepG2TRIM56
DTNBP1ENSG00000047579.15335.58900211.159400.668303.843103.10770HepG2U2AF1
DTNBP1ENSG00000047579.15324.94190191.984900.759105.846605.02980HepG2UTP3
DTNBP1ENSG00000047579.15259.07740169.347400.613302.532301.52280HepG2XRCC6
DTNBP1ENSG00000047579.15489.40090624.90420-0.352602.566502.01540K562AGGF1
DTNBP1ENSG00000047579.15613.60180770.75370-0.329002.038701.51960K562AQR
DTNBP1ENSG00000047579.151170.62200766.122800.6115010.569709.38930K562DDX47
DTNBP1ENSG00000047579.15482.47560314.322600.618105.738804.60670K562EIF3G
DTNBP1ENSG00000047579.15602.63300344.770800.8055010.017408.95070K562FXR1
DTNBP1ENSG00000047579.15226.89690324.59980-0.516602.229401.60440K562G3BP2
DTNBP1ENSG00000047579.15399.77320702.41070-0.813103.470901.68850K562HNRNPAB
DTNBP1ENSG00000047579.15302.07130419.71970-0.474502.752901.61270K562HNRNPF
DTNBP1ENSG00000047579.15564.51270419.039100.429802.538501.73290K562MAGOH
DTNBP1ENSG00000047579.15637.16300407.139300.646003.363302.63900K562PTBP1
DTNBP1ENSG00000047579.15578.64390389.217800.572003.533602.60780K562RPS19
DTNBP1ENSG00000047579.15362.74270240.433000.593202.798601.79070K562RPS3
DTNBP1ENSG00000047579.15632.90770399.157200.664906.520505.44590K562SRSF1
DTNBP1ENSG00000047579.15587.58640422.384600.476103.799502.83570K562SYNCRIP
DTNBP1ENSG00000047579.15210.41830430.62730-1.033209.543007.52370K562TRIM56
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for DTNBP1 is not available on ENCORE database.





3 RBPs can affect the splicing of DTNBP1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEDTNBP1ENSG00000047579.15chr6-155932891559331215533470155336261561549715615630-0.092000.003030.08426excludedK562PRPF8
SEDTNBP1ENSG00000047579.15chr6-155932891559331215533470155336261561549715615630-0.110000.000010.00025excludedK562AQR
SEDTNBP1ENSG00000047579.15chr6-156515431565159415637974156380351565231715652371-0.105000.011470.09057excludedK562AQR
SEDTNBP1ENSG00000047579.15chr6-156523171565237115637974156380351566304415663271-0.148000.000850.02404excludedK562RBM15
A3SSDTNBP1ENSG00000047579.15chr6-1552328515523479155232851552345015524756155249310.057000.000120.00106longerK562AQR
A3SSDTNBP1ENSG00000047579.15chr6-1552475615525004155247561552490015533470155336260.073000.000000.00000longerK562AQR
A5SSDTNBP1ENSG00000047579.15chr6-1552469415524900155247561552490015523040155234500.074000.000150.02085longerK562PRPF8
MXEDTNBP1ENSG00000047579.15chr6-1561549715615630156275731562770615533470155336261563797415638035-0.124000.001710.035472includedK562PRPF8
MXEDTNBP1ENSG00000047579.15chr6-1561549715615630156379741563803515533470155336261565154315651639-0.151000.002330.043812includedK562PRPF8

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for DTNBP1 is not avaliable on ENCORE database.