CRB3

General Information

Gene Name       : CRB3
Gene ID             : ENSG00000130545.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: CRB3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878CRB3ENSG00000130545.150.000.280.14ENCSR000AEF
HepG2CRB3ENSG00000130545.1513.872.127.99ENCSR985KAT
K562CRB3ENSG00000130545.150.040.030.04ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for CRB3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • CRB3 RNA is bound by 2 proteins.  







eCLIP assay for CRB3 is not avaliable on ENCORE database.





2 proteins are bound to CRB3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1964646136464690+5'-UTR,intron-Proximal4.7292314.54204HepG2DDX3X
chr1964663796466493+CDS,intron-Proximal4.528434.62947HepG2AQR
chr1964647366464796+CDS,intron-Proximal4.696148.20930HepG2DDX3X
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for CRB3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for CRB3 is not available on ENCORE database.

  • 61 RBPs can affect the levels of CRB3.  








The Knockdown/knockout RNA-Seq assay for CRB3 is not available on ENCORE database.





61 RBPs can affect the gene expression of CRB3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
CRB3ENSG00000130545.11206.31730124.651000.726902.282201.42270HepG2ABCF1
CRB3ENSG00000130545.1179.6608043.262000.880702.317201.40350HepG2ADAR
CRB3ENSG00000130545.11213.71650146.029700.549302.683401.92710HepG2AKAP8L
CRB3ENSG00000130545.11205.01930100.475001.028803.444802.58760HepG2CIRBP
CRB3ENSG00000130545.1186.1950036.088401.256003.331802.48550HepG2CNOT7
CRB3ENSG00000130545.1157.48420105.39070-0.874502.121701.51090HepG2CPSF6
CRB3ENSG00000130545.11108.9598062.001600.813302.439401.73720HepG2DAZAP1
CRB3ENSG00000130545.11116.5071053.464701.123704.362803.53030HepG2DDX21
CRB3ENSG00000130545.11243.90210122.417800.994405.407004.55870HepG2DDX3X
CRB3ENSG00000130545.1149.41900119.68140-1.276103.521702.42180HepG2DDX59
CRB3ENSG00000130545.11198.20490105.227300.913402.761402.14440HepG2DDX6
CRB3ENSG00000130545.1177.0187043.561600.822102.147601.51990HepG2DNAJC21
CRB3ENSG00000130545.1177.2771043.179700.839602.397701.78260HepG2DNAJC2
CRB3ENSG00000130545.11180.32840101.090200.834901.921901.41770HepG2EIF2S1
CRB3ENSG00000130545.11205.95540111.683900.882802.269501.68820HepG2EIF4A3
CRB3ENSG00000130545.11127.4652058.628501.120304.660003.62000HepG2EIF4G2
CRB3ENSG00000130545.11276.65480203.589700.442301.968701.44270HepG2ETF1
CRB3ENSG00000130545.11108.3136058.044400.899903.209401.42730HepG2FMR1
CRB3ENSG00000130545.1167.62500139.04830-1.040002.887402.08510HepG2FUBP3
CRB3ENSG00000130545.11192.94490112.783100.774502.721302.03590HepG2FXR1
CRB3ENSG00000130545.11159.46100104.570900.608602.003201.43360HepG2G3BP1
CRB3ENSG00000130545.11196.24100119.447700.716102.119401.55450HepG2GPKOW
CRB3ENSG00000130545.1173.3854033.419401.134702.823801.69980HepG2GRSF1
CRB3ENSG00000130545.1177.1577043.979000.810901.882901.33830HepG2HNRNPA1
CRB3ENSG00000130545.1188.7416048.595900.868702.762402.15510HepG2HNRNPU
CRB3ENSG00000130545.11197.28160122.602000.686202.513201.72300HepG2LARP4
CRB3ENSG00000130545.11191.27240112.822900.761502.561001.92860HepG2MAGOH
CRB3ENSG00000130545.11203.34520113.438300.841901.988101.44870HepG2MATR3
CRB3ENSG00000130545.11254.53690116.097301.132406.795505.82200HepG2NCBP2
CRB3ENSG00000130545.11117.6111061.483300.935704.286703.33730HepG2NOL12
CRB3ENSG00000130545.11150.2671060.775901.305903.867102.55820HepG2NONO
CRB3ENSG00000130545.1191.5285023.976901.932504.184301.88860HepG2NUFIP2
CRB3ENSG00000130545.1180.8948033.004901.293303.437902.44100HepG2PABPC1
CRB3ENSG00000130545.1191.7069043.343501.081103.842302.98680HepG2PPIL4
CRB3ENSG00000130545.11186.2742058.704901.665807.476506.55810HepG2PUF60
CRB3ENSG00000130545.11115.0003062.333800.883503.203302.57630HepG2PUM1
CRB3ENSG00000130545.11146.0523062.278401.229603.864003.07490HepG2PUM2
CRB3ENSG00000130545.11230.49850170.161700.437801.764201.32680HepG2RBM22
CRB3ENSG00000130545.11121.9901058.550801.058903.830203.11770HepG2RPS19
CRB3ENSG00000130545.11139.4908065.806301.083804.067603.10610HepG2RPS2
CRB3ENSG00000130545.11103.3686036.299801.509705.544504.40630HepG2RPS3A
CRB3ENSG00000130545.1195.1831043.276201.137003.760003.02890HepG2SAFB2
CRB3ENSG00000130545.1192.6233023.275701.992504.382302.59050HepG2SF1
CRB3ENSG00000130545.11106.4122056.321700.917803.937103.12350HepG2SLBP
CRB3ENSG00000130545.11101.2618050.466501.004603.600402.88300HepG2SMN1
CRB3ENSG00000130545.1196.0839043.607901.139603.345402.28100HepG2SMNDC1
CRB3ENSG00000130545.1172.5643020.881301.797003.420501.92740HepG2SNRNP200
CRB3ENSG00000130545.1174.14630125.53480-0.759602.044701.37720HepG2SNRNP70
CRB3ENSG00000130545.11148.0162057.981701.352008.708107.67910HepG2SRSF5
CRB3ENSG00000130545.1176.03720117.96430-0.633602.056901.56640HepG2SRSF9
CRB3ENSG00000130545.11277.66750166.860400.734605.143004.48640HepG2SSB
CRB3ENSG00000130545.1181.7950031.597901.372104.689103.22120HepG2STIP1
CRB3ENSG00000130545.11136.5252065.924701.050204.792804.01420HepG2SUCLG1
CRB3ENSG00000130545.11144.5230065.801101.135003.225302.50180HepG2SUPV3L1
CRB3ENSG00000130545.1160.58320130.34200-1.105304.739804.03800HepG2TAF15
CRB3ENSG00000130545.1171.31950119.74810-0.747602.646001.82640HepG2TIA1
CRB3ENSG00000130545.11151.9667047.216601.686307.623806.86950HepG2TIAL1
CRB3ENSG00000130545.1185.2758047.642300.839802.043401.54500HepG2TRIM56
CRB3ENSG00000130545.11153.3389057.378301.418008.559406.87980HepG2TUFM
CRB3ENSG00000130545.11161.9167060.751201.414202.547501.74450HepG2UBE2L3
CRB3ENSG00000130545.1167.4350032.517201.052202.613601.55530HepG2XPO5
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for CRB3 is not available on ENCORE database.






No RBPs affect the alternative splcing events of CRB3 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for CRB3 is not avaliable on ENCORE database.