ANKS1A

General Information

Gene Name       : ANKS1A
Gene ID             : ENSG00000064999.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ANKS1A)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ANKS1AENSG00000064999.142.302.722.51ENCSR000AEF
HepG2ANKS1AENSG00000064999.1413.7410.3512.04ENCSR985KAT
K562ANKS1AENSG00000064999.146.766.566.66ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ANKS1A is not avaliable on ENCORE database.



Proteins bound to RNA
  • ANKS1A RNA is bound by 36 proteins.  







eCLIP assay for ANKS1A is not avaliable on ENCORE database.





36 proteins are bound to ANKS1A RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr63505725035057280+3'-UTR,intron-Distal4.837854.85237K562UPF1
chr63505716135057213+3'-UTR,intron-Distal3.264334.01829HepG2AKAP1
chr63505893535059042+3'-UTR4.543737.89476HepG2FUBP3
chr63505713435057212+3'-UTR,intron-Distal4.533839.54560K562UPF1
chr63505669635056762+3'-UTR,intron-Distal4.387628.85840K562UPF1
chr63505892935059032+3'-UTR5.6295310.92669K562PUM2
chr63505904235059162+3'-UTR6.706999.84608K562PUM2
chr63505711735057213+3'-UTR,intron-Distal4.127397.31670HepG2UPF1
chr63505672835056808+3'-UTR,intron-Distal3.752344.27354HepG2UPF1
chr63505734135057409+3'-UTR,intron-Distal4.329964.92727HepG2AKAP1
chr63505647835056575+3'-UTR,intron-Distal4.832177.21030HepG2UPF1
chr63505809635058177+3'-UTR4.095203.95192HepG2UPF1
chr63505672935056783+3'-UTR,intron-Distal4.054323.87385HepG2AKAP1
chr63505896635059045+3'-UTR5.479246.97758HepG2DDX55
chr63485715734857218+5'-UTR,CDS5.515108.50632HepG2XRN2
chr63485711534857216+5'-UTR,CDS3.5220210.35072HepG2BUD13
chr63485705534857109+5'-UTR3.705396.45096HepG2PRPF4
chr63485706134857226+5'-UTR,CDS4.3575318.80469HepG2GTF2F1
chr63485710934857140+5'-UTR3.874745.18989HepG2PRPF4
chr63485706634857136+5'-UTR4.268558.75308HepG2NKRF
chr63485715334857232+5'-UTR,CDS4.247225.74136K562DDX24
chr63485707934857161+5'-UTR3.485336.38596HepG2GRSF1
chr63485713334857219+5'-UTR,CDS4.035333.31384K562XRN2
chr63485717134857222+5'-UTR,CDS4.313524.07072K562UCHL5
chr63485710634857231+5'-UTR,CDS4.806426.10563K562AKAP8L
chr63485710434857171+5'-UTR3.047834.00731K562UCHL5
chr63485705934857114+5'-UTR3.744425.62144HepG2NCBP2
chr63485711534857217+5'-UTR,CDS3.559407.90527K562ZNF622
chr63485707734857226+5'-UTR,CDS3.4524511.67915HepG2EIF3H
chr63485714034857223+5'-UTR,CDS4.7818619.59910HepG2PRPF4
chr63485709334857136+5'-UTR3.668133.14999HepG2GRWD1
chr63502180035021878+CDS,intron-Distal,intron-Proximal3.798783.05889HepG2SF3B4
chr63498527934985315+CDS,intron-Distal4.073673.79199HepG2PPIG
chr63495110834951193+CDS,intron-Distal3.513916.44455K562ZNF622
chr63504892835048979+CDS,intron-Distal,intron-Proximal4.870314.68690HepG2PRPF8
chr63495708434957110+CDS,intron-Distal,intron-Proximal4.305324.43680K562ZNF622
chr63504628535046349+CDS,intron-Distal,intron-Proximal4.972875.58150K562SF3B4
chr63485727734857343+CDS3.540324.13483HepG2PRPF4
chr63502185835021903+CDS,intron-Distal,intron-Proximal4.553614.20763HepG2U2AF2
chr63494969234949761+CDS3.179133.84771K562ZNF622
chr63504763235047684+CDS,intron-Distal3.847073.04254K562UCHL5
chr63496207834962184+CDS,intron-Distal,intron-Proximal3.839573.65778K562GRWD1
chr63496208034962181+CDS,intron-Distal3.713116.74842K562ZNF622
chr63495113734951203+CDS,intron-Distal,intron-Proximal3.683583.95937K562UCHL5
chr63498523034985289+CDS,intron-Distal,intron-Proximal4.048676.32636HepG2U2AF2
chr63495112834951167+CDS,intron-Distal3.241303.27569HepG2BCLAF1
chr63494973634949802+CDS,intron-Proximal3.440995.95351HepG2PRPF8
chr63502801735028089+CDS,intron-Distal,intron-Proximal4.584436.65114HepG2PRPF8
chr63494955034949651+CDS3.348815.63425HepG2BCLAF1
chr63485730434857361+CDS3.566134.20387K562ZNF622
chr63495707534957159+CDS,intron-Distal,intron-Proximal3.803353.45805K562KHSRP
chr63495289734953052+CDS,intron-Distal3.049795.47342HepG2GRWD1
chr63496213734962191+CDS,intron-Distal3.287864.34695HepG2BCLAF1
chr63498560834985655+CDS,intron-Distal3.730903.34184HepG2GRWD1
chr63496207834962152+CDS,intron-Distal,intron-Proximal3.957767.12207HepG2GRWD1
chr63502801835028092+CDS,intron-Distal,intron-Proximal4.321663.12843K562PRPF8
chr63495295134953053+CDS,intron-Distal3.158336.45823K562ZNF622
chr63498581734985881+CDS,intron-Distal,intron-Proximal3.252464.22621HepG2PRPF8
chr63495297534953051+CDS,intron-Distal3.762456.70085HepG2PPIG
chr63495110534951205+CDS,intron-Distal,intron-Proximal6.015528.93227K562DDX24
chr63495114134951202+CDS,intron-Distal3.515936.70085HepG2PPIG
chr63497263034972747+intron-Distal4.017773.90026K562KHSRP
chr63495955434959638+intron-Distal4.864147.24657K562HNRNPL
chr63489761434897767+intron-Distal5.5474019.11918K562PTBP1
chr63499340934993479+intron-Distal5.224576.95895K562PTBP1
chr63495920434959261+intron-Distal3.582845.35441K562HNRNPL
chr63495904234959140+intron-Distal4.102746.46071K562HNRNPL
chr63495915534959287+intron-Distal5.8787315.77773HepG2HNRNPL
chr63495908334959146+intron-Distal3.751106.50083HepG2HNRNPL
chr63494129534941403+intron-Distal5.176619.69896K562CSTF2T
chr63498486534985026+intron-Distal4.092613.30440HepG2QKI
chr63488649234886570+intron-Distal3.698813.14687K562CSTF2T
chr63494151634941590+intron-Distal4.886477.72686K562ILF3
chr63489762034897763+intron-Distal6.3250917.88322HepG2PTBP1
chr63494233934942440+intron-Distal4.737126.64314K562CSTF2T
chr63501923835019316+intron-Distal3.523864.35314HepG2U2AF2
chr63488066534880773+intron-Distal4.926037.00934K562TARDBP
chr63494135534941407+intron-Distal3.859406.85784K562ILF3
chr63499434234994480+intron-Distal4.1955710.49556HepG2RBFOX2
chr63494228134942403+intron-Distal4.341634.46189K562GTF2F1
chr63494127734941350+intron-Distal4.288696.65368HepG2GTF2F1
chr63495906834959126+intron-Distal3.857414.89304K562AGGF1
chr63494128534941355+intron-Distal5.2034110.12136K562ILF3
chr63502884535028910+intron-Distal4.164883.55064HepG2SFPQ
chr63495926134959296+intron-Distal4.095844.27660K562HNRNPL
chr63494233734942393+intron-Distal3.931736.36627K562ILF3
chr63503711535037179+intron-Distal4.899286.36553HepG2RBFOX2
chr63494135034941404+intron-Distal3.737143.68010HepG2GTF2F1
chr63491112634911199+intron-Distal4.873614.99795K562QKI
chr63490475134904840+intron-Distal4.690454.51080HepG2HNRNPL
chr63503704335037153+intron-Distal3.073323.37567HepG2HNRNPK
chr63487361134873685+intron-Distal4.458654.64592HepG2HNRNPM
chr63489839034898457+intron-Distal3.944533.09122HepG2PTBP1
chr63488058234880665+intron-Distal3.659415.50595K562TARDBP
chr63491076234910809+intron-Distal5.4006810.53911HepG2PTBP1
chr63491072034910819+intron-Distal3.209293.59765K562ILF3
chr63494221834942270+intron-Distal4.345485.08856K562ILF3
chr63494216134942227+intron-Distal5.8399412.05379HepG2PCBP2
chr63494875934948859+intron-Distal5.3527310.15275HepG2RBFOX2
chr63491112134911198+intron-Distal5.232046.23638HepG2QKI
chr63499343834993481+intron-Distal3.499625.19856HepG2PTBP1
chr63494127634941346+intron-Distal5.221425.77028HepG2PCBP2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ANKS1A is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ANKS1A is not available on ENCORE database.

  • 44 RBPs can affect the levels of ANKS1A.  








The Knockdown/knockout RNA-Seq assay for ANKS1A is not available on ENCORE database.





44 RBPs can affect the gene expression of ANKS1A :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ANKS1AENSG00000064999.121565.124401193.191100.391402.429801.92810HepG2AKAP1
ANKS1AENSG00000064999.121334.97230937.937000.509104.394103.43120HepG2CIRBP
ANKS1AENSG00000064999.121194.324001001.395500.254102.770102.10400HepG2CKAP4
ANKS1AENSG00000064999.121186.29040943.773600.329801.991201.47850HepG2EIF2S1
ANKS1AENSG00000064999.12482.67240627.29720-0.378102.790401.61640HepG2FAM120A
ANKS1AENSG00000064999.12690.148101082.66160-0.649602.394301.45660HepG2FTO
ANKS1AENSG00000064999.121228.58910988.988000.312902.055101.44760HepG2HNRNPK
ANKS1AENSG00000064999.12702.11300837.92980-0.255102.029601.50050HepG2HNRNPU
ANKS1AENSG00000064999.121236.18320992.234300.317001.943501.36830HepG2IGF2BP2
ANKS1AENSG00000064999.12742.930001036.75530-0.480804.076603.17360HepG2NSUN2
ANKS1AENSG00000064999.12862.832501044.47370-0.275602.504601.92030HepG2PCBP1
ANKS1AENSG00000064999.12721.481801058.23970-0.552608.341207.09680HepG2PRPF4
ANKS1AENSG00000064999.121329.270701062.832800.322603.594302.98850HepG2PTBP1
ANKS1AENSG00000064999.121382.740001051.271100.395303.861203.16990HepG2PUF60
ANKS1AENSG00000064999.12884.174801115.17120-0.334902.704802.04150HepG2PUM2
ANKS1AENSG00000064999.121497.386301150.985100.379504.301403.54770HepG2QKI
ANKS1AENSG00000064999.121003.023801273.46350-0.344403.206302.29040HepG2RBM15
ANKS1AENSG00000064999.121500.998401182.796200.343604.227703.58440HepG2NELFE
ANKS1AENSG00000064999.12889.944701245.71600-0.485204.891504.01720HepG2RPLP0
ANKS1AENSG00000064999.121291.009801106.471200.222402.029501.51130HepG2SF3B4
ANKS1AENSG00000064999.121344.797401038.026700.373403.554302.86110HepG2SRSF5
ANKS1AENSG00000064999.12965.600801136.06110-0.234502.248501.61440HepG2SRSF7
ANKS1AENSG00000064999.121042.695101438.98340-0.464707.854907.07630HepG2SSB
ANKS1AENSG00000064999.121395.081701180.479900.240902.847402.21830HepG2SUCLG1
ANKS1AENSG00000064999.12559.65000839.81530-0.585506.232504.85780HepG2SUPT6H
ANKS1AENSG00000064999.12537.62820841.86700-0.647005.646804.73350HepG2SUPV3L1
ANKS1AENSG00000064999.121132.54520821.485500.463206.779105.96400HepG2TRIM56
ANKS1AENSG00000064999.12367.95520497.26580-0.434502.700001.95010HepG2UCHL5
ANKS1AENSG00000064999.12919.142601180.04540-0.360504.046302.80640HepG2UTP18
ANKS1AENSG00000064999.12665.84440828.72790-0.315702.065701.43070HepG2XRN2
ANKS1AENSG00000064999.12727.265101044.37240-0.522108.454607.38740HepG2ZC3H8
ANKS1AENSG00000064999.12653.78160474.670000.461802.955702.01300K562EFTUD2
ANKS1AENSG00000064999.12895.44560705.149900.344603.079402.32750K562EIF2S2
ANKS1AENSG00000064999.12858.14110508.117400.756003.935102.67270K562EIF3D
ANKS1AENSG00000064999.12212.85370351.13110-0.722103.933703.05540K562G3BP2
ANKS1AENSG00000064999.12746.44960531.260900.490503.993103.29200K562HNRNPC
ANKS1AENSG00000064999.12373.54580542.82970-0.539203.238202.22510K562HNRNPM
ANKS1AENSG00000064999.12686.87100894.73980-0.381402.610001.83580K562HSPD1
ANKS1AENSG00000064999.12745.41170531.207300.488702.961002.09120K562MAGOH
ANKS1AENSG00000064999.12569.74890749.19020-0.395002.597901.80650K562PPIG
ANKS1AENSG00000064999.121706.282101271.773100.423904.205003.20500K562PUF60
ANKS1AENSG00000064999.12611.28640828.88860-0.439302.918702.36380K562PUS1
ANKS1AENSG00000064999.12658.32450807.61010-0.294902.101401.57130K562RBM15
ANKS1AENSG00000064999.12600.43190434.702300.465903.449802.34730K562RCC2
ANKS1AENSG00000064999.12701.23820506.045300.470502.178001.54220K562SRSF1
ANKS1AENSG00000064999.12804.97150512.028100.652602.806902.09510K562TARDBP
ANKS1AENSG00000064999.12655.44310486.838800.428902.821401.86410K562TRIM56
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ANKS1A is not available on ENCORE database.





6 RBPs can affect the splicing of ANKS1A :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEANKS1AENSG00000064999.12chr6+349403573494042034937786349379433494946634949763-0.158000.000010.00044excludedHepG2U2AF1
SEANKS1AENSG00000064999.12chr6+349403573494042034937786349379433494946634949763-0.129000.000000.00001excludedHepG2U2AF2
SEANKS1AENSG00000064999.12chr6+349403573494042034937786349379433494946634949763-0.111000.000730.03617excludedHepG2SFPQ
SEANKS1AENSG00000064999.12chr6+3494035734940420349377863493794334949466349497630.311000.001270.05097includedHepG2MATR3
SEANKS1AENSG00000064999.12chr6+349403573494042034937786349379433494946634949763-0.281000.000030.04741excludedHepG2RBM5
SEANKS1AENSG00000064999.12chr6+349403573494042034937786349379433494946634949763-0.133000.000100.02049excludedHepG2RBFOX2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ANKS1A is not avaliable on ENCORE database.