APOBEC3C

General Information

Gene Name       : APOBEC3C
Gene ID             : ENSG00000244509.3
Essential Gene : No

Functions

Localization

Domains (AlphaFold: APOBEC3C)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878APOBEC3CENSG00000244509.390.48114.49102.48ENCSR000AEF
HepG2APOBEC3CENSG00000244509.316.5717.1716.87ENCSR985KAT
K562APOBEC3CENSG00000244509.385.6178.2981.95ENCSR000AEO

Assays

4 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
eCLIPeCLIP: 374ENCSR739VVTAPOBEC3CK562ReleasedENCAB529HWMENCSR382QLC  
knockdown followed by RNA-seq APOBEC3C-BGKLV25-K562ENCSR963RLKAPOBEC3CK562ReleasedENCSR620PUP   shRNAKD% = 100.0,100.0
knockdown followed by RNA-seq APOBEC3C-BGHLV22-HepG2ENCSR012DAFAPOBEC3CHepG2ReleasedENCSR279HMU   shRNAKD% = 59.0,68.1
RNA Bind-n-SeqRBNS: APOBEC3CENCSR472KKUAPOBEC3Ccell-free sampleReleasedENCSR588UHH  




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