CELF1

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	CELF1	ENSG00000149187.18	49.10	49.74	49.42	ENCSR000AEF
HepG2	CELF1	ENSG00000149187.18	42.81	44.18	43.50	ENCSR985KAT
K562	CELF1	ENSG00000149187.18	54.16	54.91	54.53	ENCSR000AEO

Assay Type	Exp_Name	ENCODE ID	Target label	Biosample	Status	Controls	Method	Note
knockdown followed by RNA-seq	CELF1-BGKLV25-K562	ENCSR605MFS	CELF1	K562	Released	ENCSR620PUP	shRNA	KD% = 51.0,51.5
knockdown followed by RNA-seq	CELF1-BGHLV23-HepG2	ENCSR695XOD	CELF1	HepG2	Released	ENCSR042QTH	shRNA	KD% = 92.1,89.5
RNA Bind-n-Seq	RBNS: CELF1	ENCSR992NHR	CELF1	cell-free sample	Released

GeneName	Antibody_DCC_ID	Product_ID	Lot_ID	Phosphate	HepG2 Primary Validation	K562 Primary Validation	HepG2 Secondary Validation	K562 Secondary Validation
CELF1	ENCAB848AYT	RN034PW	1				BGHLV23-9, Released, ENCODE3	BGKLV25-9, Released, ENCODE3

GeneName	Cell_Line	Method	Exp_ID	Control_ID	Sample_reps	Control_reps	KD%	Status	Project
CELF1	K562	shRNA			BGKLV11-7,BGKLV11-8	BGKLV11-1,BGKLV11-2		NotSatisfied	ENCODE3
CELF1	K562	shRNA	ENCSR605MFS	ENCSR620PUP	CUGBP1_BGKLV25-9,CUGBP1_BGKLV25-10	NT_BGKLV25-1,NT_BGKLV25-2	51.0,51.5	Released	ENCODE3
CELF1	HepG2	shRNA	ENCSR695XOD	ENCSR042QTH	CUGBP1-BGHLV23-9,CUGBP1-BGHLV23-10	non-target-BGHLV23-1,non-target-BGHLV23-2	92.1,89.5	Released	ENCODE3

GeneName	gene_aliases	Status	Project	Note
CELF1	CELF1		Released	ENCODE3

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for CELF1 is not avaliable on ENCORE database.

The binding motifs of CELF1

Proteins bound to RNA

CELF1 RNA is bound by 47 proteins.

eCLIP assay for CELF1 is not avaliable on ENCORE database.

47 proteins are bound to CELF1 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr11	47487635	47487679	-	3'-UTR,intron-Distal	4.15617	11.55613	K562	PABPC4
chr11	47492585	47492651	-	3'-UTR,intron-Distal	3.29272	7.30038	K562	FAM120A
chr11	47493592	47493694	-	3'-UTR,intron-Distal,intron-Proximal	3.31500	4.08845	K562	SRSF1
chr11	47489775	47489825	-	3'-UTR,intron-Distal,intron-Proximal	3.00718	3.80978	K562	HNRNPC
chr11	47488599	47488678	-	3'-UTR,intron-Distal	5.27615	10.19497	HepG2	GTF2F1
chr11	47493247	47493321	-	3'-UTR,intron-Distal	3.06928	3.60267	K562	FUS
chr11	47488604	47488703	-	3'-UTR,intron-Distal	3.10383	12.31340	HepG2	FAM120A
chr11	47488477	47488586	-	3'-UTR,intron-Distal	4.49146	37.25550	K562	UPF1
chr11	47487686	47487816	-	3'-UTR,intron-Distal	3.61949	8.29127	K562	CPSF6
chr11	47488585	47488671	-	3'-UTR,intron-Distal	3.26089	8.57033	K562	DDX6
chr11	47491128	47491210	-	3'-UTR,intron-Distal	3.33037	30.67840	K562	UPF1
chr11	47491411	47491496	-	3'-UTR,intron-Distal	4.31924	13.68591	HepG2	HNRNPK
chr11	47491148	47491236	-	3'-UTR,intron-Distal	3.32893	7.14114	HepG2	PCBP2
chr11	47490559	47490642	-	3'-UTR,intron-Distal	3.11182	25.44764	K562	UPF1
chr11	47489306	47489371	-	3'-UTR,intron-Distal	3.29512	8.45237	K562	FAM120A
chr11	47487567	47487611	-	3'-UTR,intron-Distal	3.04887	7.64165	K562	UPF1
chr11	47490988	47491042	-	3'-UTR,intron-Distal	3.72888	17.86204	K562	UPF1
chr11	47488474	47488537	-	3'-UTR,intron-Distal	3.56386	6.12231	HepG2	GRSF1
chr11	47491346	47491476	-	3'-UTR,intron-Distal	3.39825	12.68325	K562	HNRNPK
chr11	47488434	47488585	-	3'-UTR,intron-Distal	3.51784	9.35643	K562	FUS
chr11	47491831	47491897	-	3'-UTR,intron-Distal,intron-Proximal,polyA_site	6.12010	26.32251	K562	CPEB4
chr11	47491796	47491816	-	3'-UTR,intron-Distal,intron-Proximal	3.72163	8.21835	K562	UPF1
chr11	47488550	47488699	-	3'-UTR,intron-Distal	4.02430	21.07662	K562	GTF2F1
chr11	47490195	47490259	-	3'-UTR,intron-Distal	3.90253	4.39658	K562	HNRNPC
chr11	47488159	47488210	-	3'-UTR,intron-Distal	3.57558	9.34167	K562	UPF1
chr11	47488500	47488549	-	3'-UTR,intron-Distal	3.23497	3.71253	K562	LIN28B
chr11	47488609	47488661	-	3'-UTR,intron-Distal	3.69125	7.14642	K562	FAM120A
chr11	47510518	47510578	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	4.22301	4.23295	HepG2	GRWD1
chr11	47487745	47487817	-	3'-UTR,intron-Distal	3.83076	7.90541	HepG2	FUBP3
chr11	47491803	47491831	-	3'-UTR,intron-Distal,intron-Proximal	4.69421	6.91047	K562	CPEB4
chr11	47491149	47491209	-	3'-UTR,intron-Distal	3.22134	5.14461	HepG2	HNRNPK
chr11	47493366	47493419	-	3'-UTR,intron-Distal	3.96452	12.44344	K562	UPF1
chr11	47493523	47493568	-	3'-UTR,intron-Distal,intron-Proximal	3.15076	4.11240	K562	TIA1
chr11	47488179	47488219	-	3'-UTR,intron-Distal	3.31654	4.46783	HepG2	FUBP3
chr11	47487566	47487679	-	3'-UTR,intron-Distal	3.01099	8.26278	HepG2	FUBP3
chr11	47493270	47493320	-	3'-UTR,intron-Distal	4.08220	14.86163	K562	UPF1
chr11	47489245	47489281	-	3'-UTR,intron-Distal	3.12137	8.29845	K562	UPF1
chr11	47488778	47488819	-	3'-UTR,intron-Distal	4.22368	10.50859	K562	UPF1
chr11	47488586	47488652	-	3'-UTR,intron-Distal	5.23145	34.74569	K562	UPF1
chr11	47491504	47491576	-	3'-UTR,intron-Distal	3.05359	14.66230	K562	UPF1
chr11	47510532	47510577	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.07580	6.45823	K562	ZNF622
chr11	47488587	47488719	-	3'-UTR,intron-Distal	4.31724	21.90654	HepG2	PRPF4
chr11	47493715	47493829	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.35677	5.25155	K562	SRSF7
chr11	47493419	47493493	-	3'-UTR,intron-Distal,intron-Proximal	3.74819	23.39218	K562	UPF1
chr11	47488719	47488825	-	3'-UTR,intron-Distal	3.58222	10.07264	HepG2	PRPF4
chr11	47490463	47490506	-	3'-UTR,intron-Distal	3.81221	9.01626	K562	UPF1
chr11	47488913	47488960	-	3'-UTR,intron-Distal	3.09448	13.80916	K562	UPF1
chr11	47488076	47488130	-	3'-UTR,intron-Distal	3.62595	12.91015	K562	PABPC4
chr11	47493215	47493258	-	3'-UTR,intron-Distal	3.96247	12.46167	K562	UPF1
chr11	47488545	47488587	-	3'-UTR,intron-Distal	3.09283	5.27795	HepG2	PRPF4
chr11	47488553	47488609	-	3'-UTR,intron-Distal	4.00965	8.68313	K562	FAM120A
chr11	47488548	47488599	-	3'-UTR,intron-Distal	3.56374	5.01332	HepG2	GTF2F1
chr11	47493708	47493759	-	3'-UTR,intron-Distal,intron-Proximal	3.37875	8.24855	HepG2	PRPF8
chr11	47491846	47491869	-	3'-UTR,intron-Distal,intron-Proximal,polyA_site	5.52127	3.09566	K562	PABPC4
chr11	47491774	47491846	-	3'-UTR,intron-Distal,intron-Proximal	5.58922	83.43797	K562	PABPC4
chr11	47492683	47492705	-	3'-UTR,intron-Distal	3.61490	8.64357	K562	UPF1
chr11	47490888	47490988	-	3'-UTR,intron-Distal	3.27836	26.68556	K562	UPF1
chr11	47488575	47488706	-	3'-UTR,intron-Distal	3.06001	6.09219	HepG2	UPF1
chr11	47491424	47491477	-	3'-UTR,intron-Distal	3.46358	14.83124	K562	UPF1
chr11	47488728	47488801	-	3'-UTR,intron-Distal	4.76357	8.91844	K562	GTF2F1
chr11	47488746	47488809	-	3'-UTR,intron-Distal	3.20693	5.81979	K562	DDX6
chr11	47488686	47488721	-	3'-UTR,intron-Distal	6.07790	14.04767	K562	UPF1
chr11	47491059	47491127	-	3'-UTR,intron-Distal	4.03546	23.68668	K562	UPF1
chr11	47487573	47487674	-	3'-UTR,intron-Distal	3.41284	4.69685	K562	FUS
chr11	47491148	47491186	-	3'-UTR,intron-Distal	4.26838	6.12175	K562	AKAP1
chr11	47491672	47491749	-	3'-UTR,intron-Distal,intron-Proximal	3.57068	19.67634	K562	UPF1
chr11	47491409	47491513	-	3'-UTR,intron-Distal	4.28291	25.30535	HepG2	PCBP2
chr11	47574561	47574628	-	5'-UTR,intron-Distal	3.44590	6.40214	HepG2	NCBP2
chr11	47545145	47545181	-	5'-UTR,intron-Distal,intron-Proximal	3.66961	4.28420	HepG2	HNRNPM
chr11	47544887	47544963	-	5'-UTR,intron-Distal	3.40934	3.59395	HepG2	PTBP1
chr11	47545060	47545168	-	5'-UTR,intron-Distal,intron-Proximal	4.30978	10.02593	K562	TARDBP
chr11	47574628	47574685	-	5'-UTR,intron-Distal,intron-Proximal	3.99235	11.27600	HepG2	NCBP2
chr11	47546071	47546117	-	5'-UTR,intron-Distal	3.59361	4.94813	HepG2	HNRNPM
chr11	47574539	47574673	-	5'-UTR,intron-Distal,intron-Proximal	3.09520	13.85655	K562	ZNF622
chr11	47574633	47574681	-	5'-UTR,intron-Distal,intron-Proximal	4.11892	8.56326	K562	DDX3X
chr11	47521206	47521260	-	5'-UTR,intron-Distal,intron-Proximal	3.57252	5.84135	HepG2	PCBP2
chr11	47544882	47544946	-	5'-UTR,intron-Distal	3.10857	3.23702	K562	PTBP1
chr11	47574565	47574633	-	5'-UTR,intron-Distal	3.79609	12.98309	K562	DDX3X
chr11	47545306	47545343	-	5'-UTR,intron-Distal	3.30112	3.66782	HepG2	HNRNPM
chr11	47544999	47545044	-	5'-UTR,intron-Distal	4.52771	4.90578	HepG2	HNRNPM
chr11	47546077	47546123	-	5'-UTR,intron-Distal	4.27841	4.13641	K562	TARDBP
chr11	47574607	47574688	-	5'-UTR,intron-Distal,intron-Proximal	4.86437	5.85529	K562	RBM15
chr11	47494667	47494715	-	CDS,intron-Distal	3.32889	5.30777	HepG2	PPIG
chr11	47500431	47500506	-	CDS,intron-Distal,intron-Proximal	3.18646	9.07209	HepG2	U2AF2
chr11	47510396	47510473	-	CDS,intron-Distal,intron-Proximal	3.61719	5.52031	HepG2	GRWD1
chr11	47505938	47506046	-	CDS,intron-Distal,intron-Proximal	3.76794	16.55491	K562	UCHL5
chr11	47497003	47497074	-	CDS,intron-Distal,intron-Proximal	3.03872	3.47879	HepG2	PPIG
chr11	47505936	47506059	-	CDS,intron-Distal,intron-Proximal	3.25936	19.27829	K562	ZNF622
chr11	47505935	47506014	-	CDS,intron-Distal,intron-Proximal	3.26590	17.50521	HepG2	BCLAF1
chr11	47498964	47499026	-	CDS,intron-Distal,intron-Proximal	4.15948	5.68247	K562	SF3B4
chr11	47498485	47498511	-	CDS,intron-Distal,intron-Proximal	3.21741	3.34848	HepG2	PPIG
chr11	47500385	47500491	-	CDS,intron-Distal,intron-Proximal	4.98811	12.43500	HepG2	PRPF8
chr11	47504321	47504399	-	CDS,intron-Distal	3.36755	5.26861	K562	DDX24
chr11	47494649	47494773	-	CDS,intron-Distal	3.80238	6.69386	HepG2	GRWD1
chr11	47508306	47508354	-	CDS,intron-Distal,intron-Proximal	3.45251	5.26861	K562	DDX24
chr11	47494601	47494674	-	CDS,intron-Distal,intron-Proximal	5.02032	4.75655	HepG2	PRPF8
chr11	47505067	47505085	-	CDS,intron-Distal,intron-Proximal	3.40365	5.91739	K562	UCHL5
chr11	47505070	47505085	-	CDS,intron-Distal,intron-Proximal	3.43993	7.64107	HepG2	PPIG
chr11	47504294	47504406	-	CDS,intron-Distal	3.92189	11.17038	HepG2	GRWD1
chr11	47510385	47510461	-	CDS,intron-Distal,intron-Proximal	3.22039	5.00751	HepG2	BCLAF1
chr11	47496966	47497062	-	CDS,intron-Distal,intron-Proximal	3.76763	3.93112	K562	RBM15
chr11	47504381	47504428	-	CDS,intron-Distal,intron-Proximal	3.23747	4.87883	K562	BUD13
chr11	47498844	47498889	-	CDS,intron-Distal,intron-Proximal	3.47893	4.13746	HepG2	PPIG
chr11	47505938	47506024	-	CDS,intron-Distal,intron-Proximal	3.13660	15.42452	K562	DDX24
chr11	47505068	47505086	-	CDS,intron-Distal,intron-Proximal	4.08034	8.51432	HepG2	BCLAF1
chr11	47505939	47506077	-	CDS,intron-Distal,intron-Proximal	3.02598	5.71881	K562	GRWD1
chr11	47505938	47506048	-	CDS,intron-Distal,intron-Proximal	3.96603	12.70516	HepG2	GRWD1
chr11	47505952	47506023	-	CDS,intron-Distal	3.80308	3.05512	HepG2	PRPF4
chr11	47504314	47504403	-	CDS,intron-Distal	3.60254	7.89260	HepG2	BCLAF1
chr11	47504175	47504256	-	CDS,intron-Distal,intron-Proximal	4.04909	4.16174	HepG2	PRPF8
chr11	47498813	47498877	-	CDS,intron-Distal,intron-Proximal	4.18026	9.39957	HepG2	PRPF8
chr11	47498354	47498432	-	CDS,intron-Distal,intron-Proximal	3.86142	7.87148	HepG2	PRPF8
chr11	47505012	47505066	-	CDS,intron-Distal,intron-Proximal	3.44476	4.24070	HepG2	GRWD1
chr11	47504390	47504433	-	CDS,intron-Distal,intron-Proximal	4.18137	4.98250	K562	AQR
chr11	47496886	47496894	-	CDS,intron-Distal,intron-Proximal	4.97044	7.06060	HepG2	PPIG
chr11	47496883	47496923	-	CDS,intron-Distal,intron-Proximal	5.30800	6.36664	K562	DDX24
chr11	47510394	47510500	-	CDS,intron-Distal,intron-Proximal	3.06145	5.24703	K562	BUD13
chr11	47505066	47505086	-	CDS,intron-Distal,intron-Proximal	3.39914	4.45064	HepG2	GRWD1
chr11	47500409	47500432	-	CDS,intron-Distal,intron-Proximal	4.14582	4.49024	K562	AQR
chr11	47505939	47506044	-	CDS,intron-Distal,intron-Proximal	3.51224	23.57948	HepG2	PPIG
chr11	47496894	47496924	-	CDS,intron-Distal,intron-Proximal	3.97044	6.08299	HepG2	PPIG
chr11	47504312	47504380	-	CDS,intron-Distal	3.15371	6.02234	K562	UCHL5
chr11	47508268	47508351	-	CDS,intron-Distal,intron-Proximal	4.68371	5.93128	HepG2	PRPF8
chr11	47499035	47499078	-	intron-Distal,intron-Proximal	3.27829	6.36174	K562	HNRNPM
chr11	47574378	47574407	-	intron-Distal	5.08056	8.52926	HepG2	RBFOX2
chr11	47563174	47563245	-	intron-Distal	3.40934	4.62036	HepG2	PTBP1
chr11	47518612	47518680	-	intron-Distal	3.06324	4.23155	HepG2	MATR3
chr11	47574423	47574503	-	intron-Distal	4.58677	17.20742	HepG2	RBFOX2
chr11	47508225	47508288	-	intron-Distal,intron-Proximal	3.12714	3.18246	K562	PRPF8
chr11	47518196	47518354	-	intron-Distal	4.97059	16.10077	K562	PTBP1
chr11	47566022	47566068	-	intron-Distal	3.35734	8.82807	K562	TARDBP
chr11	47518891	47518938	-	intron-Distal	3.05803	3.35050	HepG2	SUGP2
chr11	47545579	47545607	-	intron-Distal,intron-Proximal	4.35289	3.86368	HepG2	HNRNPM
chr11	47507868	47507972	-	intron-Distal	4.36300	10.06297	K562	KHSRP
chr11	47545953	47546008	-	intron-Distal	3.22239	3.34940	K562	HNRNPM
chr11	47538403	47538444	-	intron-Distal	4.93773	6.79267	HepG2	ILF3
chr11	47552748	47552799	-	intron-Distal	3.95854	3.24242	HepG2	HNRNPC
chr11	47563196	47563245	-	intron-Distal	3.69354	9.35533	K562	PTBP1
chr11	47499019	47499093	-	intron-Distal,intron-Proximal	4.24970	4.28663	HepG2	SUGP2
chr11	47500268	47500313	-	intron-Distal	3.40990	4.00685	K562	TIA1
chr11	47506112	47506179	-	intron-Distal,intron-Proximal	5.00643	4.90235	K562	SF3B4
chr11	47551796	47551879	-	intron-Distal	4.79332	4.90095	K562	PTBP1
chr11	47518278	47518341	-	intron-Distal	3.25328	3.45178	K562	MATR3
chr11	47571693	47571776	-	intron-Distal	4.47311	5.08856	K562	ILF3
chr11	47574063	47574139	-	intron-Distal	3.20561	5.94153	K562	NONO
chr11	47574440	47574501	-	intron-Distal	4.39026	3.29554	HepG2	GTF2F1
chr11	47500383	47500409	-	intron-Distal,intron-Proximal	5.17206	5.17615	K562	AQR
chr11	47502713	47502779	-	intron-Distal	3.53663	5.69912	HepG2	ILF3
chr11	47574139	47574196	-	intron-Distal	3.55475	7.68379	K562	NONO
chr11	47574182	47574312	-	intron-Distal	3.84859	12.43423	HepG2	RBFOX2
chr11	47534576	47534654	-	intron-Distal	3.47475	3.35103	HepG2	QKI
chr11	47574312	47574378	-	intron-Distal	7.07288	36.96291	HepG2	RBFOX2
chr11	47567000	47567034	-	intron-Distal	6.27448	11.50595	HepG2	QKI
chr11	47518190	47518278	-	intron-Distal	3.82074	4.51915	K562	MATR3
chr11	47564293	47564370	-	intron-Distal	4.15331	3.82619	K562	ILF3
chr11	47498387	47498397	-	intron-Distal,intron-Proximal	5.22183	7.28294	K562	AQR
chr11	47571681	47571778	-	intron-Distal	3.77179	8.92781	HepG2	ILF3
chr11	47534687	47534799	-	intron-Distal	5.44608	8.20307	HepG2	QKI
chr11	47493659	47493731	-	intron-Distal,intron-Proximal	4.07514	3.43234	HepG2	U2AF1
chr11	47499235	47499290	-	intron-Distal,intron-Proximal	4.36732	5.54542	K562	HNRNPM
chr11	47546358	47546425	-	intron-Distal,intron-Proximal	3.33198	8.21819	K562	TARDBP
chr11	47565607	47565691	-	intron-Distal	3.45519	4.28420	HepG2	HNRNPM
chr11	47573843	47573914	-	intron-Distal	3.32859	5.87723	K562	NONO
chr11	47570877	47570951	-	intron-Distal	3.57820	4.09779	K562	NONO
chr11	47574368	47574408	-	intron-Distal	3.13971	3.58549	K562	NONO
chr11	47567355	47567430	-	intron-Distal	4.49154	4.71638	K562	HNRNPL
chr11	47504179	47504245	-	intron-Distal,intron-Proximal	5.46766	7.81430	K562	AQR
chr11	47516890	47516987	-	intron-Distal	4.26704	15.01555	HepG2	PCBP2
chr11	47565590	47565683	-	intron-Distal	3.03389	6.27048	K562	TARDBP
chr11	47505000	47505005	-	intron-Distal,intron-Proximal	4.94163	17.55185	K562	AQR
chr11	47574437	47574487	-	intron-Distal	4.42842	5.59615	K562	NONO
chr11	47567034	47567107	-	intron-Distal	7.40196	55.73000	HepG2	QKI
chr11	47504935	47505000	-	intron-Distal,intron-Proximal	5.51963	24.43051	K562	AQR
chr11	47496809	47496887	-	intron-Distal,intron-Proximal	5.60331	7.81430	K562	AQR
chr11	47499842	47499903	-	intron-Distal	6.09002	13.96605	HepG2	HNRNPM
chr11	47565445	47565491	-	intron-Distal	3.26593	3.42785	HepG2	HNRNPM
chr11	47570888	47570943	-	intron-Distal	3.64409	3.64140	HepG2	SFPQ
chr11	47531070	47531126	-	intron-Distal	3.48273	4.02778	HepG2	HNRNPC
chr11	47567353	47567419	-	intron-Distal	3.53115	5.73784	K562	AGGF1
chr11	47567107	47567131	-	intron-Distal	5.93956	10.44346	HepG2	QKI
chr11	47574404	47574490	-	intron-Distal	3.95507	6.70492	K562	RBFOX2
chr11	47518204	47518341	-	intron-Distal	4.01831	11.96641	HepG2	PTBP1
chr11	47517543	47517612	-	intron-Distal	3.65157	3.95921	HepG2	U2AF2
chr11	47567019	47567131	-	intron-Distal	7.95429	99.07032	K562	QKI
chr11	47545944	47546009	-	intron-Distal	3.68937	6.18434	HepG2	HNRNPM
chr11	47538444	47538462	-	intron-Distal	4.69760	5.38422	HepG2	ILF3
chr11	47530182	47530278	-	intron-Distal	4.46767	5.18738	K562	TARDBP
chr11	47498351	47498387	-	intron-Distal,intron-Proximal	4.50107	8.01338	K562	AQR
chr11	47516638	47516723	-	intron-Distal	3.96096	13.44140	HepG2	QKI
chr11	47574229	47574403	-	intron-Distal	4.05749	13.12027	K562	RBFOX2
chr11	47566068	47566122	-	intron-Distal	4.42111	11.00366	K562	TARDBP
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for CELF1 is not avaliable on ENCORE database.

Diffrential Expression

10,480 differentially expressed genes after Knockdown/Knockout CELF1 protein.

98 RBPs can affect the levels of CELF1.

10,480 differentially expressed genes after Knockdown/Knockout CELF1 protein :

Only display 100 entries as example. Please click "View All" button to see all 10,480 entries.

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
DPM1	ENSG00000000419.8	1998.13730	2300.49450	-0.20330	2.11130	1.53780	HepG2	CELF1
C1orf112	ENSG00000000460.12	237.71240	530.61720	-1.15850	17.06510	15.73940	HepG2	CELF1
FUCA2	ENSG00000001036.9	2296.84180	4688.59270	-1.02950	45.21780	43.27670	HepG2	CELF1
GCLC	ENSG00000001084.6	2565.25390	1633.65920	0.65090	15.55270	14.27270	HepG2	CELF1
SEMA3F	ENSG00000001617.7	565.08120	448.62840	0.33280	2.44640	1.83440	HepG2	CELF1
CYP51A1	ENSG00000001630.11	3917.08550	4816.01270	-0.29810	4.86780	4.05890	HepG2	CELF1
KRIT1	ENSG00000001631.10	690.91160	833.03080	-0.26990	2.10990	1.53650	HepG2	CELF1
MYH16	ENSG00000002079.8	30.13030	9.03250	1.73790	2.95150	2.29120	HepG2	CELF1
LAP3	ENSG00000002549.8	3763.73910	2643.30210	0.50970	11.50870	10.37350	HepG2	CELF1
CD99	ENSG00000002586.13	4121.84980	2851.79950	0.53130	10.86350	9.75500	HepG2	CELF1
LASP1	ENSG00000002834.13	15976.08300	8449.38450	0.91890	45.81710	43.86470	HepG2	CELF1
DBNDD1	ENSG00000003249.9	1895.96770	775.42520	1.28980	46.96530	44.97900	HepG2	CELF1
CASP10	ENSG00000003400.10	821.54750	992.70110	-0.27300	2.20770	1.62360	HepG2	CELF1
CFLAR	ENSG00000003402.15	3089.15750	2219.41390	0.47690	9.86410	8.79240	HepG2	CELF1
RBM5	ENSG00000003756.12	3021.18270	3456.99840	-0.19440	2.02270	1.45680	HepG2	CELF1
SLC7A2	ENSG00000003989.12	4992.54500	5984.58920	-0.26150	4.07010	3.31840	HepG2	CELF1
ARF5	ENSG00000004059.6	1246.80630	996.46980	0.32320	2.62440	1.99640	HepG2	CELF1
PLXND1	ENSG00000004399.8	8509.34480	2157.96980	1.97930	50.17190	48.13910	HepG2	CELF1
FKBP4	ENSG00000004478.5	1910.38090	2431.47420	-0.34800	4.87140	4.06220	HepG2	CELF1
KDM1A	ENSG00000004487.11	3349.31250	4677.74520	-0.48190	10.90840	9.79810	HepG2	CELF1
RBM6	ENSG00000004534.10	3649.56750	4857.98080	-0.41260	8.15950	7.16610	HepG2	CELF1
RECQL	ENSG00000004700.11	1462.30050	1130.09140	0.37170	3.88620	3.14740	HepG2	CELF1
ARHGAP33	ENSG00000004777.14	114.51010	220.63170	-0.94620	6.23010	5.33910	HepG2	CELF1
PDK4	ENSG00000004799.7	0.58960	9.90060	-4.06980	2.10860	1.53560	HepG2	CELF1
SLC25A13	ENSG00000004864.9	1579.64940	2094.10980	-0.40670	6.27440	5.38050	HepG2	CELF1
CDC27	ENSG00000004897.7	2818.71630	3376.61760	-0.26050	3.52140	2.81460	HepG2	CELF1
HCCS	ENSG00000004961.10	750.17090	479.73590	0.64490	8.38920	7.38500	HepG2	CELF1
SKAP2	ENSG00000005020.8	993.50910	750.83600	0.40390	3.82290	3.08890	HepG2	CELF1
SLC25A5	ENSG00000005022.5	5228.58510	6324.19570	-0.27450	4.05480	3.30410	HepG2	CELF1
DHX33	ENSG00000005100.8	1396.38140	1773.88050	-0.34520	4.63090	3.83770	HepG2	CELF1
LIG3	ENSG00000005156.7	559.95290	906.60600	-0.69520	10.14830	9.06660	HepG2	CELF1
ACSM3	ENSG00000005187.7	696.03990	1021.99680	-0.55410	7.60320	6.63600	HepG2	CELF1
AC004381.6	ENSG00000005189.15	200.59620	368.26590	-0.87650	8.05390	7.06490	HepG2	CELF1
CIAPIN1	ENSG00000005194.10	1842.82230	1441.17050	0.35460	3.42700	2.72780	HepG2	CELF1
SPPL2B	ENSG00000005206.12	493.79660	348.81590	0.50140	4.38400	3.60770	HepG2	CELF1
FAM214B	ENSG00000005238.15	376.51650	201.78100	0.89980	9.25210	8.20500	HepG2	CELF1
MSL3	ENSG00000005302.13	384.53650	297.39120	0.37070	1.92790	1.37270	HepG2	CELF1
CREBBP	ENSG00000005339.8	1680.83030	1435.95590	0.22710	2.20570	1.62200	HepG2	CELF1
GCFC2	ENSG00000005436.9	647.21500	828.41560	-0.35610	2.47580	1.86120	HepG2	CELF1
RHBDD2	ENSG00000005486.12	774.73150	491.59350	0.65610	8.53600	7.52570	HepG2	CELF1
IBTK	ENSG00000005700.10	2317.87760	3025.57700	-0.38440	6.84600	5.92140	HepG2	CELF1
ZNF195	ENSG00000005801.12	831.94590	631.97950	0.39650	2.53420	1.91410	HepG2	CELF1
ITGAL	ENSG00000005844.13	7.22300	75.17420	-3.37960	8.41110	7.40580	HepG2	CELF1
PDK2	ENSG00000005882.7	400.54680	566.85010	-0.50100	4.30570	3.53560	HepG2	CELF1
ITGA3	ENSG00000005884.13	563.90520	121.38430	2.21580	50.86080	48.81800	HepG2	CELF1
ZFX	ENSG00000005889.11	534.53910	872.44100	-0.70680	11.00370	9.88890	HepG2	CELF1
LAMP2	ENSG00000005893.11	8003.30840	5243.88250	0.60990	18.58980	17.22410	HepG2	CELF1
ITGA2B	ENSG00000005961.13	19.98910	46.82320	-1.22800	2.64870	2.01770	HepG2	CELF1
ASB4	ENSG00000005981.8	749.31460	168.76560	2.15050	59.35250	57.16550	HepG2	CELF1
GDE1	ENSG00000006007.7	3530.34840	2135.06880	0.72540	22.10280	20.64360	HepG2	CELF1
CRLF1	ENSG00000006016.6	10933.00130	4541.64970	1.26730	50.75560	48.71470	HepG2	CELF1
TMEM132A	ENSG00000006118.10	934.81290	622.64390	0.58620	8.13710	7.14440	HepG2	CELF1
CX3CL1	ENSG00000006210.6	2383.86550	1857.50050	0.35980	5.43150	4.58600	HepG2	CELF1
SPATA20	ENSG00000006282.15	2044.73510	1401.75440	0.54460	10.78520	9.67930	HepG2	CELF1
TNFRSF12A	ENSG00000006327.9	2634.87130	647.62650	2.02440	118.61190	115.80280	HepG2	CELF1
MAP3K9	ENSG00000006432.11	847.66620	602.52590	0.49240	5.61410	4.75980	HepG2	CELF1
BAIAP2L1	ENSG00000006453.9	1609.25570	994.40990	0.69440	14.66470	13.41520	HepG2	CELF1
AGK	ENSG00000006530.11	605.20440	776.72100	-0.36000	3.35750	2.66300	HepG2	CELF1
ALDH3B1	ENSG00000006534.11	83.96490	166.19550	-0.98500	5.22270	4.39100	HepG2	CELF1
FARP2	ENSG00000006607.9	876.00130	1269.06490	-0.53480	8.17590	7.18160	HepG2	CELF1
GGCT	ENSG00000006625.13	705.35750	892.24810	-0.33910	2.99900	2.33470	HepG2	CELF1
DBF4	ENSG00000006634.3	401.57460	708.44960	-0.81900	11.91730	10.76200	HepG2	CELF1
IFRD1	ENSG00000006652.9	1256.96130	814.75200	0.62540	10.73060	9.62650	HepG2	CELF1
VPS41	ENSG00000006715.11	790.67630	999.78450	-0.33850	3.35110	2.65720	HepG2	CELF1
ARSD	ENSG00000006756.11	624.34040	358.84000	0.79890	11.63830	10.49630	HepG2	CELF1
ADIPOR2	ENSG00000006831.9	3307.29570	4106.88610	-0.31240	4.93500	4.12140	HepG2	CELF1
PROM1	ENSG00000007062.7	1224.86750	797.38930	0.61920	10.56130	9.46340	HepG2	CELF1
CCDC124	ENSG00000007080.6	331.79210	226.56340	0.55030	3.97210	3.22790	HepG2	CELF1
PAFAH1B1	ENSG00000007168.8	3391.82060	2683.50500	0.33780	5.18460	4.35460	HepG2	CELF1
PAX6	ENSG00000007372.16	155.16370	41.94490	1.88710	13.98200	12.75300	HepG2	CELF1
RPUSD1	ENSG00000007376.3	154.98910	80.12110	0.95180	4.32210	3.55140	HepG2	CELF1
RHBDF1	ENSG00000007384.11	350.51310	246.24110	0.50930	3.27280	2.58560	HepG2	CELF1
LUC7L	ENSG00000007392.12	1218.02340	1535.98800	-0.33460	3.77400	3.04560	HepG2	CELF1
BAIAP3	ENSG00000007516.9	290.10750	120.52990	1.26710	6.91280	5.98390	HepG2	CELF1
TSR3	ENSG00000007520.3	291.93230	187.45740	0.63900	4.17960	3.42050	HepG2	CELF1
E2F2	ENSG00000007968.6	178.22240	327.87090	-0.87940	5.05290	4.23210	HepG2	CELF1
JARID2	ENSG00000008083.9	786.04860	1001.45790	-0.34940	3.29930	2.61000	HepG2	CELF1
NADK	ENSG00000008130.11	1564.75580	1272.79250	0.29780	3.19970	2.51820	HepG2	CELF1
CYTH3	ENSG00000008256.11	361.62910	231.37300	0.64420	4.80450	4.00100	HepG2	CELF1
SYPL1	ENSG00000008282.3	2122.13980	1808.98340	0.23020	2.38280	1.77800	HepG2	CELF1
CYB561	ENSG00000008283.11	25.20630	60.80250	-1.27030	3.31140	2.62090	HepG2	CELF1
AASS	ENSG00000008311.10	219.43590	556.95740	-1.34380	23.08300	21.59780	HepG2	CELF1
PLEKHG6	ENSG00000008323.11	86.70850	280.95850	-1.69610	18.04920	16.69520	HepG2	CELF1
SS18L2	ENSG00000008324.6	209.70650	296.23370	-0.49840	3.02200	2.35530	HepG2	CELF1
NFIX	ENSG00000008441.12	669.27550	450.36460	0.57140	6.40960	5.50880	HepG2	CELF1
ST3GAL1	ENSG00000008513.10	1073.20520	1522.56000	-0.50460	7.76910	6.79410	HepG2	CELF1
IL32	ENSG00000008517.12	3129.35580	2537.63340	0.30230	4.27260	3.50540	HepG2	CELF1
PKD1	ENSG00000008710.13	806.57440	393.63400	1.03490	20.01150	18.60370	HepG2	CELF1
RPS20	ENSG00000008988.5	7095.96050	8884.00280	-0.32420	4.76860	3.96730	HepG2	CELF1
CSDE1	ENSG00000009307.11	11109.20650	12434.59910	-0.16260	1.89720	1.34610	HepG2	CELF1
UBE3C	ENSG00000009335.13	2283.46900	1709.61130	0.41750	6.95820	6.02670	HepG2	CELF1
MASP2	ENSG00000009724.12	101.62540	148.75740	-0.54970	1.93490	1.37890	HepG2	CELF1
POMT2	ENSG00000009830.7	855.30090	596.95910	0.51870	6.09110	5.20770	HepG2	CELF1
VTA1	ENSG00000009844.11	1914.76510	2238.05180	-0.22510	2.40020	1.79370	HepG2	CELF1
MLXIPL	ENSG00000009950.11	2267.05960	2851.43680	-0.33090	5.12650	4.29940	HepG2	CELF1
ZNF207	ENSG00000010244.12	4217.01770	4878.85930	-0.21030	2.59930	1.97430	HepG2	CELF1
CD9	ENSG00000010278.7	1009.97030	383.28610	1.39770	36.90850	35.10290	HepG2	CELF1
NCAPD2	ENSG00000010292.8	2223.75450	5634.44360	-1.34130	40.68080	38.80050	HepG2	CELF1
SEMA3G	ENSG00000010319.2	1072.12440	720.73390	0.57280	5.37560	4.53260	HepG2	CELF1
NISCH	ENSG00000010322.11	1665.76830	1311.41590	0.34500	4.41640	3.63720	HepG2	CELF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

98 RBPs can affect the gene expression of CELF1 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
CELF1	ENSG00000149187.13	2552.50250	2983.43530	-0.22510	2.83380	2.05840	HepG2	AKAP8L
CELF1	ENSG00000149187.13	2055.30280	2524.03500	-0.29640	2.04720	1.36750	HepG2	ASCC1
CELF1	ENSG00000149187.13	2385.48060	3002.94900	-0.33210	3.02910	1.55950	HepG2	ATP5C1
CELF1	ENSG00000149187.13	3671.68660	4246.32950	-0.20980	2.89180	2.19220	HepG2	AUH
CELF1	ENSG00000149187.13	3071.02420	2377.03610	0.36950	3.65620	2.97920	HepG2	BOP1
CELF1	ENSG00000149187.13	1407.67760	2968.82270	-1.07660	58.59480	56.49220	HepG2	CKAP4
CELF1	ENSG00000149187.13	2620.57480	2182.21840	0.26400	1.93550	1.34940	HepG2	CPSF6
CELF1	ENSG00000149187.13	1825.28100	2470.72380	-0.43680	7.23700	5.60750	HepG2	YBX3
CELF1	ENSG00000149187.13	1562.43660	3297.49980	-1.07760	42.94020	41.02980	HepG2	CELF1
CELF1	ENSG00000149187.13	1391.06630	1870.92840	-0.42760	3.28890	1.76740	HepG2	DDX28
CELF1	ENSG00000149187.13	2603.31130	3396.18840	-0.38360	3.99200	2.45190	HepG2	DDX47
CELF1	ENSG00000149187.13	2165.35640	2685.34240	-0.31050	2.46900	1.50990	HepG2	DDX5
CELF1	ENSG00000149187.13	2320.51020	2841.04010	-0.29200	4.35710	3.54440	HepG2	DKC1
CELF1	ENSG00000149187.13	1954.64530	2426.14820	-0.31180	4.06740	3.22760	HepG2	DNAJC21
CELF1	ENSG00000149187.13	1962.61910	2404.60450	-0.29300	5.22650	4.37520	HepG2	DNAJC2
CELF1	ENSG00000149187.13	2944.22200	2413.04840	0.28690	1.88190	1.38200	HepG2	EIF2S1
CELF1	ENSG00000149187.13	1505.50300	2524.31310	-0.74560	14.14000	11.77170	HepG2	EIF2S2
CELF1	ENSG00000149187.13	3890.64880	2666.56200	0.54490	5.15650	4.28490	HepG2	EIF4A3
CELF1	ENSG00000149187.13	2545.83540	3497.94490	-0.45840	10.18280	8.77220	HepG2	EIF4G1
CELF1	ENSG00000149187.13	2382.46480	3350.77190	-0.49200	5.57540	4.44170	HepG2	EIF4G2
CELF1	ENSG00000149187.13	2259.33050	2882.57260	-0.35150	3.16350	2.00000	HepG2	ESF1
CELF1	ENSG00000149187.13	1244.33760	1554.40550	-0.32100	2.46580	1.36370	HepG2	FAM120A
CELF1	ENSG00000149187.13	1955.39040	1519.44400	0.36380	3.49510	2.61480	HepG2	FUBP3
CELF1	ENSG00000149187.13	1546.40630	2473.63190	-0.67770	7.65860	6.62670	HepG2	GPKOW
CELF1	ENSG00000149187.13	2260.28840	2835.02380	-0.32690	5.43830	4.11580	HepG2	HDGF
CELF1	ENSG00000149187.13	1980.43410	2675.17650	-0.43380	2.68650	1.34190	HepG2	HNRNPA0
CELF1	ENSG00000149187.13	2030.50960	2449.39010	-0.27060	2.31770	1.72160	HepG2	HNRNPA1
CELF1	ENSG00000149187.13	3222.93420	2527.90330	0.35030	3.17710	2.43010	HepG2	HNRNPK
CELF1	ENSG00000149187.13	1879.62590	2706.44420	-0.52600	12.81140	11.58450	HepG2	HNRNPU
CELF1	ENSG00000149187.13	2550.99100	3387.48820	-0.40920	2.82860	1.58300	HepG2	HSPD1
CELF1	ENSG00000149187.13	3220.92620	2537.00590	0.34420	2.73230	2.06060	HepG2	IGF2BP2
CELF1	ENSG00000149187.13	3672.81340	2381.19040	0.62510	2.16580	1.30470	HepG2	IGF2BP3
CELF1	ENSG00000149187.13	2453.56230	2764.55000	-0.17220	2.23300	1.56610	HepG2	ILF2
CELF1	ENSG00000149187.13	2164.32540	3083.02680	-0.51040	3.35010	1.87870	HepG2	ILF3
CELF1	ENSG00000149187.13	2209.15750	3014.35550	-0.44840	3.23110	1.92170	HepG2	KHDRBS1
CELF1	ENSG00000149187.13	2393.35400	2714.49290	-0.18160	2.45910	1.49650	HepG2	KIF1C
CELF1	ENSG00000149187.13	2951.18700	3717.34880	-0.33300	2.02210	1.32030	HepG2	LARP4
CELF1	ENSG00000149187.13	2965.36340	3515.61630	-0.24560	2.52300	1.79640	HepG2	NOL12
CELF1	ENSG00000149187.13	1257.83090	2093.21890	-0.73480	10.59320	9.20710	HepG2	NSUN2
CELF1	ENSG00000149187.13	4097.36750	2890.64740	0.50320	2.66270	1.79570	HepG2	PABPC1
CELF1	ENSG00000149187.13	3050.29810	2467.06750	0.30610	2.11200	1.47280	HepG2	PABPC4
CELF1	ENSG00000149187.13	2207.75450	2678.96630	-0.27910	3.92640	2.93670	HepG2	PARN
CELF1	ENSG00000149187.13	2095.90310	2413.93900	-0.20380	1.96550	1.33570	HepG2	PPIL4
CELF1	ENSG00000149187.13	1531.59690	1905.16170	-0.31490	2.12350	1.41180	HepG2	PRPF8
CELF1	ENSG00000149187.13	2958.86610	2491.20630	0.24810	3.40040	2.80710	HepG2	PTBP1
CELF1	ENSG00000149187.13	2435.67960	3356.02690	-0.46240	5.89910	5.07300	HepG2	PUF60
CELF1	ENSG00000149187.13	2687.85280	3024.67570	-0.17030	2.04910	1.50050	HepG2	PUS1
CELF1	ENSG00000149187.13	3240.84740	2697.73470	0.26450	2.18980	1.62300	HepG2	QKI
CELF1	ENSG00000149187.13	4657.68780	4074.92410	0.19270	2.16020	1.68730	HepG2	RBM22
CELF1	ENSG00000149187.13	3028.72650	2582.28660	0.23000	3.22800	2.56870	HepG2	RECQL
CELF1	ENSG00000149187.13	1953.59800	3176.50590	-0.70130	6.44840	5.23080	HepG2	RPS3A
CELF1	ENSG00000149187.13	1223.50210	1884.59140	-0.62320	6.10510	4.98610	HepG2	RRP9
CELF1	ENSG00000149187.13	1871.45290	2410.23170	-0.36500	7.07200	6.10920	HepG2	SAFB2
CELF1	ENSG00000149187.13	5050.42100	3477.14930	0.53840	3.85190	3.05060	HepG2	SF3A3
CELF1	ENSG00000149187.13	2848.99260	2336.51950	0.28600	2.33680	1.68600	HepG2	SF3B1
CELF1	ENSG00000149187.13	3219.46060	2593.41220	0.31190	2.99510	2.38370	HepG2	SF3B4
CELF1	ENSG00000149187.13	2484.53690	3218.05900	-0.37320	8.52460	7.39950	HepG2	SLBP
CELF1	ENSG00000149187.13	2183.72190	2810.77710	-0.36420	8.77660	7.73230	HepG2	SMN1
CELF1	ENSG00000149187.13	1790.07150	2579.60460	-0.52710	3.81630	2.67760	HepG2	SMNDC1
CELF1	ENSG00000149187.13	7387.75680	4602.45930	0.68260	31.67620	30.46310	HepG2	SRFBP1
CELF1	ENSG00000149187.13	3293.46370	2707.06500	0.28280	4.89490	4.31180	HepG2	SRSF1
CELF1	ENSG00000149187.13	2652.59690	2202.43130	0.26820	4.25620	3.59940	HepG2	SRSF9
CELF1	ENSG00000149187.13	3194.82920	3995.99360	-0.32280	6.31140	5.59410	HepG2	SSB
CELF1	ENSG00000149187.13	2871.56350	2433.50450	0.23870	2.77640	2.21530	HepG2	TAF15
CELF1	ENSG00000149187.13	1652.17470	2301.11250	-0.47800	5.20770	4.25770	HepG2	TARDBP
CELF1	ENSG00000149187.13	2134.43730	2629.96570	-0.30120	3.28350	2.74600	HepG2	TIAL1
CELF1	ENSG00000149187.13	1152.59980	2653.31530	-1.20290	55.95710	53.85410	HepG2	TRIM56
CELF1	ENSG00000149187.13	1046.86800	1452.36220	-0.47230	4.05700	3.13770	HepG2	UCHL5
CELF1	ENSG00000149187.13	1556.70370	2251.27510	-0.53220	3.66400	2.49510	HepG2	UPF2
CELF1	ENSG00000149187.13	2516.21570	3169.62410	-0.33310	5.29090	3.88370	HepG2	UTP18
CELF1	ENSG00000149187.13	4469.70860	2977.19210	0.58610	19.73700	18.35450	HepG2	UTP3
CELF1	ENSG00000149187.13	2009.28350	2845.26850	-0.50190	3.40500	2.18030	HepG2	XPO5
CELF1	ENSG00000149187.13	1734.45770	2420.23520	-0.48070	4.63750	3.70780	HepG2	XRN2
CELF1	ENSG00000149187.13	2328.42820	3391.48010	-0.54260	19.28340	18.15990	HepG2	ZNF622
CELF1	ENSG00000149187.13	8016.63150	5645.02960	0.50590	16.43530	15.17560	K562	AGGF1
CELF1	ENSG00000149187.13	7468.31460	5873.91090	0.34640	3.83470	3.06380	K562	AKAP8L
CELF1	ENSG00000149187.13	7881.89660	6235.05510	0.33800	3.23750	2.61210	K562	AQR
CELF1	ENSG00000149187.13	5190.60770	3717.00890	0.48170	7.92330	6.58180	K562	CPSF6
CELF1	ENSG00000149187.13	7476.77750	9674.47360	-0.37180	6.01130	4.58040	K562	CELF1
CELF1	ENSG00000149187.13	5038.12870	6412.53230	-0.34800	7.33720	6.34470	K562	DDX47
CELF1	ENSG00000149187.13	7235.46830	6320.73790	0.19490	2.41450	1.60430	K562	DKC1
CELF1	ENSG00000149187.13	3210.53260	4735.12340	-0.56060	14.15010	12.71420	K562	EIF2S2
CELF1	ENSG00000149187.13	6776.70490	7868.22730	-0.21550	2.94110	1.97320	K562	EIF4G2
CELF1	ENSG00000149187.13	5212.59550	6310.01200	-0.27560	2.86170	2.09430	K562	GRSF1
CELF1	ENSG00000149187.13	6871.87830	4425.17110	0.63490	2.97280	1.69820	K562	HNRNPA2B1
CELF1	ENSG00000149187.13	3664.34830	3147.02670	0.21950	1.89450	1.38910	K562	HNRNPC
CELF1	ENSG00000149187.13	4740.11620	6515.01370	-0.45880	5.74500	4.61360	K562	HSPD1
CELF1	ENSG00000149187.13	7668.87840	6233.68140	0.29880	3.12850	2.24730	K562	KIF1C
CELF1	ENSG00000149187.13	1595.14900	3030.65280	-0.92590	9.68190	7.82070	K562	KRR1
CELF1	ENSG00000149187.13	5255.36780	4512.21690	0.21990	3.33650	2.45200	K562	MTPAP
CELF1	ENSG00000149187.13	7228.70680	4894.78710	0.56240	4.01760	2.89710	K562	NAA15
CELF1	ENSG00000149187.13	5585.37890	3870.52390	0.52900	2.19690	1.33560	K562	PABPN1
CELF1	ENSG00000149187.13	4793.31510	3983.24430	0.26700	2.33030	1.43680	K562	PCBP2
CELF1	ENSG00000149187.13	6687.17790	8084.83910	-0.27380	2.76800	1.32900	K562	PNPT1
CELF1	ENSG00000149187.13	4561.90120	5455.07590	-0.25800	2.00920	1.31380	K562	PPIG
CELF1	ENSG00000149187.13	3157.18090	4349.69410	-0.46230	6.93690	5.92140	K562	PTBP1
CELF1	ENSG00000149187.13	10093.22770	5825.29580	0.79290	15.62960	14.37840	K562	PUS1
CELF1	ENSG00000149187.13	7859.82580	5675.88310	0.46960	10.08890	8.98120	K562	RBM15
CELF1	ENSG00000149187.13	3334.83540	4170.43550	-0.32260	3.00770	2.12740	K562	RBM22
CELF1	ENSG00000149187.13	3420.32970	4388.81020	-0.35970	3.23260	2.04140	K562	NELFE
CELF1	ENSG00000149187.13	3401.97600	4968.87840	-0.54650	6.80590	5.14870	K562	RPS3
CELF1	ENSG00000149187.13	2641.97640	3746.04440	-0.50380	3.72790	2.16470	K562	RRP9
CELF1	ENSG00000149187.13	7280.72120	3539.54990	1.04040	5.68760	3.76290	K562	SF1
CELF1	ENSG00000149187.13	7096.05910	4946.96450	0.52040	13.30190	11.62570	K562	SF3A3
CELF1	ENSG00000149187.13	4886.65280	3961.57660	0.30270	3.60740	2.62650	K562	SF3B4
CELF1	ENSG00000149187.13	6974.42930	4065.17890	0.77870	3.81430	2.28600	K562	SNRNP200
CELF1	ENSG00000149187.13	6907.79100	5068.25610	0.44660	15.85830	13.87990	K562	SRPK2
CELF1	ENSG00000149187.13	3746.54720	4797.21100	-0.35660	4.34280	2.97560	K562	SRSF4
CELF1	ENSG00000149187.13	2351.98490	2882.98740	-0.29370	2.45340	1.57180	K562	TRIM56
CELF1	ENSG00000149187.13	5286.93140	6084.66370	-0.20270	2.87820	1.58260	K562	TROVE2
CELF1	ENSG00000149187.13	5380.09230	3692.67430	0.54290	5.51820	3.86590	K562	U2AF1
CELF1	ENSG00000149187.13	4599.34030	3814.32350	0.26990	2.93800	2.11010	K562	U2AF2
CELF1	ENSG00000149187.13	2313.11050	3754.38580	-0.69870	10.07430	8.08220	K562	UCHL5
CELF1	ENSG00000149187.13	5714.59380	4548.75950	0.32910	3.81200	2.78100	K562	WDR3
CELF1	ENSG00000149187.13	5511.42680	4730.07750	0.22050	3.84430	2.85740	K562	WDR43
CELF1	ENSG00000149187.13	2991.16600	3822.88010	-0.35400	2.97880	1.70840	K562	XRN2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for CELF1 is not available on ENCORE database.

21 RBPs can affect the splicing of CELF1 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	CELF1	ENSG00000149187.13	chr11	-	47521004	47521156			47510388	47510576	47574543	47574669	-0.15500	0.00001	0.00086	excluded	K562	AKAP8L
SE	CELF1	ENSG00000149187.13	chr11	-	47521004	47521156			47510388	47510576	47574543	47574669	-0.22800	0.00018	0.04835	excluded	HepG2	DKC1
SE	CELF1	ENSG00000149187.13	chr11	-	47521004	47521156			47510388	47510576	47574543	47574669	-0.39100	0.00304	0.06553	excluded	HepG2	HNRNPK
SE	CELF1	ENSG00000149187.13	chr11	-	47505004	47505084			47504246	47504408	47505940	47506075	-0.05200	0.00099	0.01206	excluded	K562	AQR
SE	CELF1	ENSG00000149187.13	chr11	-	47521004	47521156			47510388	47510576	47574543	47574669	0.38600	0.00000	0.00006	included	K562	FXR1
SE	CELF1	ENSG00000149187.13	chr11	-	47521004	47521156			47510388	47510576	47574543	47574669	-0.19200	0.00000	0.00006	excluded	K562	PUS1
SE	CELF1	ENSG00000149187.13	chr11	-	47521004	47521156			47510388	47510576	47574543	47574669	-0.41300	0.00032	0.02508	excluded	HepG2	NCBP2
SE	CELF1	ENSG00000149187.13	chr11	-	47521004	47521156			47510388	47510576	47522412	47522484	0.12000	0.00216	0.07952	included	HepG2	SFPQ
SE	CELF1	ENSG00000149187.13	chr11	-	47521004	47521156			47510388	47510576	47574543	47574669	0.27900	0.00194	0.09559	included	HepG2	FTO
SE	CELF1	ENSG00000149187.13	chr11	-	47505004	47505084			47504246	47504408	47505940	47506075	-0.06900	0.00031	0.02608	excluded	HepG2	FTO
SE	CELF1	ENSG00000149187.13	chr11	-	47521004	47521156			47510388	47510576	47574543	47574669	0.25000	0.00020	0.03499	included	K562	HNRNPM
SE	CELF1	ENSG00000149187.13	chr11	-	47521004	47521156			47510388	47510576	47574543	47574669	-0.28700	0.00000	0.00010	excluded	K562	HNRNPUL1
SE	CELF1	ENSG00000149187.13	chr11	-	47521004	47521156			47510388	47510576	47574543	47574669	-0.13200	0.00051	0.02049	excluded	K562	UTP18
SE	CELF1	ENSG00000149187.13	chr11	-	47493549	47493654			47491845	47492107	47493742	47493929	-0.25400	0.00294	0.04744	excluded	K562	U2AF2
SE	CELF1	ENSG00000149187.13	chr11	-	47521004	47521156			47510388	47510576	47574543	47574669	-0.22200	0.00001	0.00055	excluded	K562	HNRNPU
SE	CELF1	ENSG00000149187.13	chr11	-	47521004	47521156			47510388	47510576	47574543	47574669	-0.15600	0.00008	0.00365	excluded	K562	RBM15
SE	CELF1	ENSG00000149187.13	chr11	-	47521004	47521156			47510388	47510576	47574543	47574669	-0.17800	0.00000	0.00002	excluded	K562	AGGF1
A3SS	CELF1	ENSG00000149187.13	chr11	-	47500428	47500504			47500428	47500492	47504246	47504408	0.43900	0.00175	0.04166	longer	HepG2	U2AF2
A3SS	CELF1	ENSG00000149187.13	chr11	-	47500428	47500504			47500428	47500492	47504246	47504408	0.28000	0.00009	0.06925	longer	HepG2	PRPF4
A3SS	CELF1	ENSG00000149187.13	chr11	-	47490365	47490479			47490365	47490443	47493742	47493968	0.21600	0.00031	0.00240	longer	K562	AQR
A3SS	CELF1	ENSG00000149187.13	chr11	-	47500428	47500504			47500428	47500492	47504246	47504471	0.13700	0.00626	0.03521	longer	K562	AQR
A3SS	CELF1	ENSG00000149187.13	chr11	-	47493882	47493929			47493882	47493909	47494639	47494849	0.11700	0.00000	0.00000	longer	K562	AQR
A3SS	CELF1	ENSG00000149187.13	chr11	-	47504246	47504471			47504246	47504408	47505004	47505084	0.05300	0.00000	0.00004	longer	K562	AQR
A3SS	CELF1	ENSG00000149187.13	chr11	-	47498397	47498511			47498397	47498508	47498848	47498977	0.22300	0.00045	0.06653	longer	K562	SF3B1
MXE	CELF1	ENSG00000149187.13	chr11	-	47508301	47508350	47508710	47508793	47505940	47506075	47510388	47510576	0.16600	0.00000	0.00000	1included	K562	DROSHA
MXE	CELF1	ENSG00000149187.13	chr11	-	47498397	47498511	47498848	47498977	47496887	47497073	47500428	47500504	0.16700	0.00450	0.05982	1included	K562	U2AF1
MXE	CELF1	ENSG00000149187.13	chr11	-	47508301	47508350	47508710	47508793	47505940	47506075	47510388	47510576	0.11900	0.00031	0.04143	1included	K562	NPM1
MXE	CELF1	ENSG00000149187.13	chr11	-	47508301	47508350	47508710	47508793	47505940	47506075	47510388	47510576	0.10600	0.00000	0.00007	1included	K562	HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

CELF1

General Information

Functions

Localization(RBPImage: CELF1)

Domains (AlphaFold: CELF1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for CELF1 is not avaliable on ENCORE database.

47 proteins are bound to CELF1 RNA:

eCLIP assay for CELF1 is not avaliable on ENCORE database.

Diffrential Expression

10,480 differentially expressed genes after Knockdown/Knockout CELF1 protein :

98 RBPs can affect the gene expression of CELF1 :

The Knockdown/knockout RNA-Seq assay for CELF1 is not available on ENCORE database.

21 RBPs can affect the splicing of CELF1 :

The Knockdown/knockout RNA-Seq assay for CELF1 is not avaliable on ENCORE database.