UTP3

General Information

Gene Name       : UTP3
Gene ID             : ENSG00000132467.3
Essential Gene : Yes

Functions

Localization(RBPImage: UTP3)

Domains (AlphaFold: UTP3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878UTP3ENSG00000132467.342.2041.2941.75ENCSR000AEF
HepG2UTP3ENSG00000132467.320.6225.8023.21ENCSR985KAT
K562UTP3ENSG00000132467.342.6946.6044.64ENCSR000AEO

Assays

3 Released experiments are available on ENCORE database.

Assay TypeExp_NameENCODE IDTarget labelBiosampleStatusLinked AntibodyControlsMethodNote
eCLIPeCLIP: 475ENCSR734ZHLUTP3K562ReleasedENCAB872CCUENCSR241ALC  
knockdown followed by RNA-seq UTP3-BGKLV38-K562ENCSR473KFOUTP3K562ReleasedENCSR655JYC   shRNAKD% = 51.7,50.8
knockdown followed by RNA-seq UTP3-BGHLV33-HepG2ENCSR910ECLUTP3HepG2ReleasedENCSR691IVR   shRNAKD% = 70.3,65.4






  eCLIP  
  RBP    Exp_UID    Cell_Line    ENCODE_ACCESSION    Control_ENCODE_ACCESSION    ENCODE_Antibody_ID    Antibody    Lot_num    Status    Project  
UTP3475K562ENCSR734ZHLENCSR241ALCENCAB872CCUA302-067A1ReleasedENCODE4


  Antibody Validation  
  GeneName    Antibody_DCC_ID    Product_ID    Lot_ID    Phosphate    HepG2 Primary Validation    K562 Primary Validation    HepG2 Secondary Validation    K562 Secondary Validation  
UTP3ENCAB872CCUA302-067A1Released, ENCODE3BGHLV33-37, Released, ENCODE3BGKLV38-103, Released, ENCODE3


  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
UTP3K562shRNABGKLV34-47,BGKLV34-48BGKLV34-1,BGKLV34-20.0,0.0NotSatisfiedENCODE3
UTP3K562shRNABGKLV38-101,BGKLV38-102BGKLV38-1,BGKLV38-2NotSatisfiedENCODE3
UTP3K562shRNAENCSR473KFOENCSR655JYCUTP3-BGKLV38-103D,UTP3-BGKLV38-104DNT-BGKLV38-1D,NT-BGKLV38-2D51.7,50.8ReleasedENCODE3
UTP3K562shRNABGKLV38-105,BGKLV38-106BGKLV38-1,BGKLV38-226.3,19.3NotSatisfiedENCODE3
UTP3K562shRNABGKLV38-107,BGKLV38-108BGKLV38-1,BGKLV38-20.0,1.6NotSatisfiedENCODE3
UTP3HepG2shRNAENCSR910ECLENCSR691IVRUTP3_BGHLV33-37,UTP3_BGHLV33-38NT_BGHLV33-1,NT_BGHLV33-270.3,65.4ReleasedENCODE3


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  
    UTP3: Click to RBP Image Database
  • Nuclei
  • Nucleolus
  • Cytoplasm
  • Compartment/Organelle
  • Mitochondria












    • RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela
    UTP3Product_ID: A302-067A
    Lot_ID: 1
    Source: Bethyl Labs
    Target Name: UTP3-human    		 UTP3-HEPG2.png<br>Caption: Western blot following shRNA against UTP3 in HepG2 whole cell lysate using UTP3 specific antibody. Lane 1 is a ladder, lane 2 is HepG2 non-targeting control knockdown, lane 3 and 4 are two different shRNAs against UTP3. UTP3 protein appears as the green arrow, GAPDH serves as a control and appears in red arrow.
    		 K562_Bethyl_A302-067A_1_UTP3.png<br>Caption: IP-Western Blot analysis of K562 whole cell lysate using UTP3 specific antibody. Lane 1 is 1% of twenty million whole cell lysate input and lane 2 is 10% of IP enrichment using rabbit normal IgG (lanes under 'IgG'). Lane 3 is 1% of twenty million whole cell lysate input and lane 4 is 10% IP enrichment using rabbit polyclonal anti-UTP3 antibody (lanes under 'UTP3').
    		 UTP3-k562.png<br>Caption: Western blot following shRNA against UTP3 in k562 whole cell lysate using UTP3 specific antibody. Lane 1 is a ladder, lane 2 is k562 non-targeting control knockdown, lane 3 and 4 are two different shRNAs against UTP3. UTP3 protein appears as the green band, Tubulin serves as a control and appears in red.








    RNA Targets
    • UTP3 protein binds to 16 RNA regions.  





    Proteins bound to RNA
    • UTP3 RNA is bound by 8 proteins.  






    UTP3 protein has 16 RNA targets:

    Only display 100 entries as example. Please click "View All" button to see all 16 entries.     

    RBP Chr Start End Strand log2(fold change) -log(p-value) Cell Line Matched Gene Matched Area
    UTP3chr5892919892930+10.8913175.63463K562TRIP135'-UTR
    UTP3chr14524217845242197+3.3015870.71733K562RPS8intron-Distal
    UTP3chr1270765447076559-4.13126400.00000K562PHB2intron-Distal,intron-Proximal
    UTP3chr1270765117076541-4.2600245.34818K562PHB2intron-Distal,intron-Proximal
    UTP3chr213812009238120104+11.30409110.30539K562SIM2CDS
    UTP3chr213812008238120092+11.30409110.30539K562SIM2CDS
    UTP3chr116262038662620398-4.1000428.95777K562SNHG1intron-Distal,intron-Proximal
    UTP3chr174299388542993891-11.0868192.32062K562GFAPintron-Distal
    UTP3chr116262039862620413-3.3508087.12657K562SNHG1intron-Distal,intron-Proximal
    UTP3chr14524219745242207+3.1872171.31059K562RPS8intron-Distal
    UTP3chr177893552678935554+10.1232658.06722K562RPTORintron-Distal
    UTP3chr174299390142993908-11.0868192.32062K562GFAPintron-Distal
    UTP3chr174299389142993901-11.0868192.32062K562GFAPintron-Distal
    UTP3chr1260543956054403-10.3194532.12919K562ANO2intron-Distal
    UTP3chr5892908892916+10.8913175.63463K562TRIP135'-UTR
    UTP3chr1260544036054421-10.3194532.12919K562ANO2intron-Distal




    8 proteins are bound to UTP3 RNA:

    Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
    chr47155425471554379+5'-UTR3.2405712.85699K562DDX3X
    chr47155472671554824+CDS4.0173611.84473K562LIN28B
    chr47155465271554753+CDS3.228304.51709HepG2BCLAF1
    chr47155524871555273+CDS4.344554.72838K562UCHL5
    chr47155572471555806+CDS3.010434.88483K562ZNF622
    chr47155576371555823+CDS4.8098713.28384K562UCHL5
    chr47155469171554768+CDS5.2471415.84981K562UCHL5
    chr47155575271555820+CDS4.030345.65086HepG2BCLAF1
    chr47155463171554754+CDS4.134063.70701HepG2PRPF4
    chr47155470171554755+CDS3.849623.15006K562RBM15
    chr47155465871554766+CDS3.898853.04332HepG2SRSF9
    chr47155524371555293+CDS3.274864.74886HepG2BCLAF1
    chr47155470271554760+CDS5.4604910.17900K562ZNF622
    ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




    No autoregularoty interactions between protein UTP3 and its RNA.



    Diffrential Expression
    • 9,503 differentially expressed genes after Knockdown/Knockout UTP3 protein.  





    • 98 RBPs can affect the levels of UTP3.  







    9,503 differentially expressed genes after Knockdown/Knockout UTP3 protein :

    Only display 100 entries as example. Please click "View All" button to see all 9,503 entries.     

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    C1orf112ENSG00000000460.12224.80810306.35030-0.446502.329501.76930HepG2UTP3
    FUCA2ENSG00000001036.93486.520502629.668000.406808.962407.98480HepG2UTP3
    GCLCENSG00000001084.63315.611501249.232901.4081082.9660080.45520HepG2UTP3
    STPG1ENSG00000001460.13146.2063094.428400.630602.322201.76250HepG2UTP3
    SEMA3FENSG00000001617.7219.22940463.71950-1.0808013.5336012.35830HepG2UTP3
    RAD52ENSG00000002016.12164.70330256.71140-0.640303.648602.97700HepG2UTP3
    MYH16ENSG00000002079.843.041903.151103.771704.245703.52910HepG2UTP3
    CD99ENSG00000002586.132409.644402918.16250-0.276204.327103.60490HepG2UTP3
    LASP1ENSG00000002834.138490.452507340.415200.209903.793603.10960HepG2UTP3
    SNX11ENSG00000002919.10421.58040180.572701.2231013.9948012.80540HepG2UTP3
    M6PRENSG00000003056.32891.100501808.993400.6763021.4115019.97780HepG2UTP3
    DBNDD1ENSG00000003249.91415.63460911.390100.6352010.764109.70680HepG2UTP3
    ALS2ENSG00000003393.101733.930601466.789100.241302.673502.08480HepG2UTP3
    CASP10ENSG00000003400.10481.35170614.37760-0.352002.683502.09380HepG2UTP3
    CFLARENSG00000003402.152149.418702434.82070-0.179901.946601.42590HepG2UTP3
    TFPIENSG00000003436.1012423.6545014037.66780-0.176203.059502.43530HepG2UTP3
    RBM5ENSG00000003756.122673.578903000.78330-0.166602.007901.48060HepG2UTP3
    SLC7A2ENSG00000003989.123080.655606947.50020-1.1733045.7688043.76850HepG2UTP3
    ARF5ENSG00000004059.61269.601801021.260300.313902.939102.32500HepG2UTP3
    PLXND1ENSG00000004399.81063.092801965.50720-0.886608.710707.74330HepG2UTP3
    AK2ENSG00000004455.123956.659203178.399300.315906.170405.33510HepG2UTP3
    FKBP4ENSG00000004478.51736.794401457.335900.253002.920402.30860HepG2UTP3
    RBM6ENSG00000004534.103777.572404728.23450-0.323807.057606.17530HepG2UTP3
    RECQLENSG00000004700.11396.84210678.86650-0.7746010.530509.48260HepG2UTP3
    ARHGAP33ENSG00000004777.14155.30030394.16480-1.3437016.9982015.70070HepG2UTP3
    SLC25A13ENSG00000004864.91882.653801644.136600.195302.098201.56270HepG2UTP3
    ST7ENSG00000004866.14861.94250517.408100.7362011.7526010.65360HepG2UTP3
    HCCSENSG00000004961.10505.27170317.905800.668406.684605.82230HepG2UTP3
    DVL2ENSG00000004975.7767.86310966.59890-0.332103.261502.62070HepG2UTP3
    SLC25A5ENSG00000005022.54095.710403464.623000.241303.879303.18840HepG2UTP3
    POLR2JENSG00000005075.111109.70560890.201400.317903.374102.72470HepG2UTP3
    DHX33ENSG00000005100.81865.148501383.805600.430507.474406.56820HepG2UTP3
    RPAP3ENSG00000005175.5925.89390608.731600.604908.653807.68900HepG2UTP3
    ACSM3ENSG00000005187.7603.482201060.22590-0.8130015.9770014.71200HepG2UTP3
    AC004381.6ENSG00000005189.1593.43680244.12340-1.3855011.4673010.38000HepG2UTP3
    CIAPIN1ENSG00000005194.101304.69920671.332700.9585024.9474023.42300HepG2UTP3
    SPPL2BENSG00000005206.12464.29320716.99120-0.626907.803306.87910HepG2UTP3
    CROTENSG00000005469.7408.16850229.952700.827708.102907.16490HepG2UTP3
    ABCB4ENSG00000005471.11497.93650726.22020-0.544406.225405.38590HepG2UTP3
    RHBDD2ENSG00000005486.12952.31750653.394200.543407.789906.86620HepG2UTP3
    IBTKENSG00000005700.101038.163402552.71820-1.2980056.4218054.25860HepG2UTP3
    ZNF195ENSG00000005801.121014.04100430.882801.2346031.9738030.28250HepG2UTP3
    ITGALENSG00000005844.1352.78290118.71530-1.169404.742203.99230HepG2UTP3
    PDK2ENSG00000005882.7438.12970667.81220-0.608106.790205.92210HepG2UTP3
    ITGA3ENSG00000005884.1381.4745035.865501.183703.571202.90640HepG2UTP3
    ZFXENSG00000005889.111310.969401741.01190-0.409307.003006.12360HepG2UTP3
    ITGA2BENSG00000005961.137.4931026.93670-1.845902.353101.79090HepG2UTP3
    ASB4ENSG00000005981.8148.9122027.870002.4176017.0169015.71910HepG2UTP3
    GDE1ENSG00000006007.72716.525001619.669800.7460024.6797023.16180HepG2UTP3
    CRLF1ENSG00000006016.61442.418502736.48720-0.9238021.0477019.62650HepG2UTP3
    MAP3K14ENSG00000006062.9181.59500114.071900.670703.136702.50570HepG2UTP3
    TMEM132AENSG00000006118.10984.35990738.916900.413705.045204.27680HepG2UTP3
    ZNF263ENSG00000006194.6835.95020655.307000.351103.320502.67520HepG2UTP3
    CX3CL1ENSG00000006210.63794.962003390.933000.162302.057801.52580HepG2UTP3
    TNFRSF12AENSG00000006327.91326.50470408.037301.7008036.4198034.61820HepG2UTP3
    MAP3K9ENSG00000006432.111141.43230632.833800.8508018.5371017.19730HepG2UTP3
    RALAENSG00000006451.3504.29780637.01050-0.337002.450301.87920HepG2UTP3
    BAIAP2L1ENSG00000006453.9909.60470692.831300.392604.268303.55010HepG2UTP3
    JHDM1DENSG00000006459.61008.042102252.77780-1.1601022.9336021.45670HepG2UTP3
    AGKENSG00000006530.11717.29480578.493800.310202.164401.62100HepG2UTP3
    GGCTENSG00000006625.13665.69040466.905200.511605.050104.28140HepG2UTP3
    IFRD1ENSG00000006652.91424.74190587.930701.2769043.4661041.50180HepG2UTP3
    COX10ENSG00000006695.6617.02540380.040300.699108.623907.66120HepG2UTP3
    VPS41ENSG00000006715.11575.57110809.31050-0.491705.504904.70840HepG2UTP3
    ARHGAP44ENSG00000006740.12204.08980132.569500.622402.858802.25340HepG2UTP3
    ELAC2ENSG00000006744.141636.98300791.263301.0487033.6063031.87550HepG2UTP3
    MARK4ENSG00000007047.10415.48810924.98060-1.1546011.9883010.87740HepG2UTP3
    CCDC124ENSG00000007080.6816.66600411.516400.9887018.5883017.24660HepG2UTP3
    PAFAH1B1ENSG00000007168.81572.115601821.54000-0.212502.365901.80270HepG2UTP3
    KIAA0100ENSG00000007202.104622.185104112.311600.168502.206901.65860HepG2UTP3
    ST7LENSG00000007341.14335.45890245.195300.452102.673502.08480HepG2UTP3
    RPUSD1ENSG00000007376.3352.03480198.603600.825707.353806.45460HepG2UTP3
    RHBDF1ENSG00000007384.11140.93220235.00500-0.737703.766903.08530HepG2UTP3
    LUC7LENSG00000007392.12874.096001255.10300-0.521907.731506.81140HepG2UTP3
    BAIAP3ENSG00000007516.960.90080138.95250-1.190105.350904.56320HepG2UTP3
    MYLIPENSG00000007944.10200.4100084.658701.243108.687107.72080HepG2UTP3
    CYTH3ENSG00000008256.11282.38470197.169000.518102.658702.07170HepG2UTP3
    SYPL1ENSG00000008282.31354.618301125.892400.266702.779602.18170HepG2UTP3
    CYB561ENSG00000008283.1124.8695087.33150-1.812104.713503.96500HepG2UTP3
    SPAG9ENSG00000008294.163619.766204108.47360-0.182702.345501.78390HepG2UTP3
    CELSR3ENSG00000008300.101808.676901323.033500.451008.226107.28200HepG2UTP3
    PLEKHG6ENSG00000008323.11193.07700450.07800-1.2210015.8671014.60670HepG2UTP3
    SS18L2ENSG00000008324.6159.12690104.302100.609302.264901.71150HepG2UTP3
    CRY1ENSG00000008405.7543.38190362.810900.582605.604204.80030HepG2UTP3
    NFIXENSG00000008441.12458.36770726.95720-0.665408.223507.28000HepG2UTP3
    ST3GAL1ENSG00000008513.10815.231901625.98550-0.9960030.3515028.68660HepG2UTP3
    IL32ENSG00000008517.121361.768902240.12640-0.718106.848105.97710HepG2UTP3
    PKD1ENSG00000008710.131105.236401454.19350-0.395903.083602.45740HepG2UTP3
    MAPK8IP2ENSG00000008735.10777.73980153.342602.3424070.8887068.52810HepG2UTP3
    RHOBTB2ENSG00000008853.12481.35610318.407100.596105.322004.53620HepG2UTP3
    SEC62ENSG00000008952.121752.454303050.91190-0.7999029.4872027.84790HepG2UTP3
    RPS20ENSG00000008988.57023.765006260.614100.165802.275401.72070HepG2UTP3
    CSDE1ENSG00000009307.119552.0692011404.71880-0.255705.549704.74970HepG2UTP3
    UBE3CENSG00000009335.13850.476101328.64970-0.6436012.6874011.54600HepG2UTP3
    MASP2ENSG00000009724.12175.70500322.08260-0.874307.205306.31460HepG2UTP3
    VTA1ENSG00000009844.11612.714101772.68910-1.5327065.0333062.74430HepG2UTP3
    MLXIPLENSG00000009950.114899.789407758.62730-0.6631015.5529014.30590HepG2UTP3
    BAZ1BENSG00000009954.62889.673103707.98160-0.359707.247506.35450HepG2UTP3
    SPRTNENSG00000010072.11262.76260146.832600.839505.693104.88450HepG2UTP3
    METTL13ENSG00000010165.15648.27620389.015300.736709.752808.73910HepG2UTP3
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    98 RBPs can affect the gene expression of UTP3 :

    Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
    UTP3ENSG00000132467.2573.00190421.136800.444202.404301.40140HepG2AATF
    UTP3ENSG00000132467.2731.36440529.112700.466904.337403.60890HepG2ACO1
    UTP3ENSG00000132467.22011.37450578.152801.7986036.9131035.27300HepG2AKAP1
    UTP3ENSG00000132467.2728.18670478.366100.606104.721803.70800HepG2ASCC1
    UTP3ENSG00000132467.21038.83160820.394800.340503.349502.60650HepG2AUH
    UTP3ENSG00000132467.2740.94270547.827900.435503.445302.59720HepG2CALR
    UTP3ENSG00000132467.2777.12650454.482900.773807.406106.18840HepG2CIRBP
    UTP3ENSG00000132467.2688.15240529.002400.379403.745002.99380HepG2CKAP4
    UTP3ENSG00000132467.2648.85240324.974300.997507.019805.80420HepG2CNOT7
    UTP3ENSG00000132467.21255.43280710.392900.8214016.6791015.36630HepG2CELF1
    UTP3ENSG00000132467.21013.77150553.812000.872209.601008.49630HepG2DDX3X
    UTP3ENSG00000132467.2517.75240367.845500.493103.309701.89630HepG2DDX47
    UTP3ENSG00000132467.2768.00220545.151500.494402.969202.17300HepG2DDX55
    UTP3ENSG00000132467.2662.38390475.770300.477302.701602.09160HepG2DDX6
    UTP3ENSG00000132467.2511.05100365.717200.482602.880901.75110HepG2EFTUD2
    UTP3ENSG00000132467.2486.91900356.131600.451202.269101.44360HepG2EIF3D
    UTP3ENSG00000132467.2876.50310492.102500.832706.371905.35870HepG2EIF4B
    UTP3ENSG00000132467.2865.65730592.331300.547303.497102.63880HepG2FIP1L1
    UTP3ENSG00000132467.2383.13210249.627500.618004.026203.08580HepG2FUBP3
    UTP3ENSG00000132467.2724.06260519.631700.478502.481601.42250HepG2FUS
    UTP3ENSG00000132467.2795.76050509.970200.641805.278104.34300HepG2FXR1
    UTP3ENSG00000132467.2750.13020473.045900.665105.368904.45530HepG2G3BP1
    UTP3ENSG00000132467.2699.18780502.233200.477203.164902.21110HepG2G3BP2
    UTP3ENSG00000132467.2692.05610483.446600.517403.795302.59730HepG2GNB2L1
    UTP3ENSG00000132467.2198.32100393.97370-0.990308.207507.18100HepG2HNRNPA1
    UTP3ENSG00000132467.2282.16730438.21290-0.635104.197003.35590HepG2HNRNPC
    UTP3ENSG00000132467.2588.71010768.65490-0.384802.887602.15650HepG2HNRNPF
    UTP3ENSG00000132467.2706.66420479.063100.560704.307803.45200HepG2HNRNPK
    UTP3ENSG00000132467.2545.44340408.708900.416302.804401.84700HepG2HNRNPM
    UTP3ENSG00000132467.2555.12800435.316400.350702.625902.03530HepG2HNRNPU
    UTP3ENSG00000132467.2632.40090445.179000.506402.863201.60740HepG2HSPD1
    UTP3ENSG00000132467.2541.68960756.91490-0.482703.966203.11300HepG2IGF2BP1
    UTP3ENSG00000132467.21068.94510451.277201.244006.330104.87220HepG2IGF2BP3
    UTP3ENSG00000132467.2714.16650473.557600.592605.475903.88810HepG2LARP7
    UTP3ENSG00000132467.2855.95540510.148500.746505.259604.36140HepG2MAGOH
    UTP3ENSG00000132467.2590.74310401.097900.558504.296402.33070HepG2MARK2
    UTP3ENSG00000132467.21251.12570512.995601.2861018.6927017.17310HepG2MATR3
    UTP3ENSG00000132467.2640.40800372.712700.780804.552403.22280HepG2METAP2
    UTP3ENSG00000132467.2987.17220757.526500.381903.342002.50500HepG2NOL12
    UTP3ENSG00000132467.2620.64900430.901300.526305.329704.20530HepG2PARN
    UTP3ENSG00000132467.2971.48730474.241301.0345023.6054022.12460HepG2PCBP1
    UTP3ENSG00000132467.2356.28030465.98520-0.387302.652601.89330HepG2PRPF4
    UTP3ENSG00000132467.2737.05970482.583400.610907.964207.13440HepG2PTBP1
    UTP3ENSG00000132467.2991.35210767.565000.369004.337903.63140HepG2PUM1
    UTP3ENSG00000132467.2666.78630474.551700.490601.994301.38600HepG2RAVER1
    UTP3ENSG00000132467.2951.23120592.820400.682108.644007.23940HepG2RBM15
    UTP3ENSG00000132467.21009.46820787.270400.358602.990902.45790HepG2RBM22
    UTP3ENSG00000132467.2671.03590474.309800.500504.187203.37310HepG2RBM25
    UTP3ENSG00000132467.2744.50860571.020000.382602.551601.60180HepG2RBM27
    UTP3ENSG00000132467.2657.37910537.048100.291602.065601.58370HepG2NELFE
    UTP3ENSG00000132467.2607.86430827.89170-0.445703.160102.43730HepG2RPLP0
    UTP3ENSG00000132467.2478.35780325.987800.553202.796501.99270HepG2RPS3A
    UTP3ENSG00000132467.2730.62900537.575400.442603.131701.98370HepG2RPS5
    UTP3ENSG00000132467.2851.68320617.106800.464702.709502.04280HepG2SF3A3
    UTP3ENSG00000132467.2757.56980502.386400.592503.969303.28220HepG2SF3B4
    UTP3ENSG00000132467.2554.08820693.26730-0.323302.649301.96060HepG2SLBP
    UTP3ENSG00000132467.2565.58750452.103900.323002.599001.97230HepG2SMN1
    UTP3ENSG00000132467.21316.99120790.824900.735702.435401.70370HepG2SNRNP70
    UTP3ENSG00000132467.21374.81760889.194600.6286012.8199011.95150HepG2SRFBP1
    UTP3ENSG00000132467.21032.52080524.401100.9773020.9772019.93180HepG2SRSF1
    UTP3ENSG00000132467.2595.94870755.14620-0.341602.673001.98910HepG2SRSF7
    UTP3ENSG00000132467.2757.48220426.644100.8281014.6088013.52030HepG2SRSF9
    UTP3ENSG00000132467.2619.81000443.408900.483102.876601.56960HepG2SSRP1
    UTP3ENSG00000132467.2992.13900811.949200.289102.567601.96390HepG2SUCLG1
    UTP3ENSG00000132467.2594.86930471.403400.335502.361301.83650HepG2TAF15
    UTP3ENSG00000132467.2459.25580699.93010-0.607905.036304.10120HepG2TARDBP
    UTP3ENSG00000132467.2594.56070363.749300.708802.838501.82950HepG2TFIP11
    UTP3ENSG00000132467.2551.32600433.101100.348102.301701.53740HepG2TIA1
    UTP3ENSG00000132467.2745.25640506.724200.556404.350703.57190HepG2U2AF1
    UTP3ENSG00000132467.21027.91270747.655100.459202.693101.86770HepG2UBE2L3
    UTP3ENSG00000132467.2431.62610528.37670-0.291801.983101.45840HepG2UTP3
    UTP3ENSG00000132467.21078.57500766.190900.493304.761203.16160K562AARS
    UTP3ENSG00000132467.2568.86530790.35340-0.474405.305204.56040K562AGGF1
    UTP3ENSG00000132467.2462.07540604.96300-0.388703.298401.62900K562AKAP1
    UTP3ENSG00000132467.23722.420002059.327700.8540011.4445010.36980K562AQR
    UTP3ENSG00000132467.2950.680201177.23480-0.308403.440102.36460K562BCLAF1
    UTP3ENSG00000132467.2837.821801165.09580-0.475703.877602.84360K562BOP1
    UTP3ENSG00000132467.21018.678601238.82310-0.282302.250101.53570K562CPSF6
    UTP3ENSG00000132467.2696.78760893.10820-0.358102.774101.71640K562CSTF2
    UTP3ENSG00000132467.2997.072901293.01910-0.375004.489302.92300K562DDX21
    UTP3ENSG00000132467.2411.24030612.94160-0.575805.179103.69210K562DDX3X
    UTP3ENSG00000132467.21237.978101686.35150-0.445906.670505.62520K562EIF2S2
    UTP3ENSG00000132467.2741.97720982.72570-0.405402.337701.39590K562EIF3D
    UTP3ENSG00000132467.2889.16170640.351000.473504.002403.01680K562EIF4A3
    UTP3ENSG00000132467.2784.856001009.92980-0.363803.022301.69790K562EXOSC5
    UTP3ENSG00000132467.2829.955001068.38460-0.364302.498901.63260K562FTO
    UTP3ENSG00000132467.21450.39250665.934401.1229030.7890028.91120K562FXR1
    UTP3ENSG00000132467.21869.538502247.19730-0.265402.175101.49950K562GRSF1
    UTP3ENSG00000132467.2825.510601219.23500-0.562606.940905.29250K562HNRNPA1
    UTP3ENSG00000132467.2505.73880838.70480-0.729806.724905.83410K562HNRNPC
    UTP3ENSG00000132467.21506.463601893.34850-0.329802.721701.93310K562HSPD1
    UTP3ENSG00000132467.21292.70870928.980800.476604.897903.77200K562MAGOH
    UTP3ENSG00000132467.21190.42160927.059600.360603.214302.21430K562MATR3
    UTP3ENSG00000132467.21055.336401519.42350-0.525805.558204.55590K562NSUN2
    UTP3ENSG00000132467.2422.778301029.96660-1.284603.784002.57510K562PABPN1
    UTP3ENSG00000132467.21249.33900826.518900.595906.783205.23100K562PCBP2
    UTP3ENSG00000132467.21607.51360893.037200.8479012.3366010.74370K562PRPF8
    UTP3ENSG00000132467.21798.23140902.581000.9944022.4478020.62630K562PTBP1
    UTP3ENSG00000132467.2539.47430815.71780-0.596504.235203.58560K562PUS1
    UTP3ENSG00000132467.21247.25130865.335900.527305.448704.22300K562RBM22
    UTP3ENSG00000132467.21335.97150910.658400.552805.451403.84410K562NELFE
    UTP3ENSG00000132467.2937.70760646.582900.536206.246904.92490K562SF3B4
    UTP3ENSG00000132467.21266.13210884.857300.516805.908004.88350K562SRSF1
    UTP3ENSG00000132467.2730.63600897.33690-0.296502.662701.41290K562SSB
    UTP3ENSG00000132467.21268.63520988.335200.360103.483602.56340K562SYNCRIP
    UTP3ENSG00000132467.21137.72460895.475100.345302.426101.76110K562TARDBP
    UTP3ENSG00000132467.2497.76930723.26980-0.539103.801402.69940K562TIAL1
    UTP3ENSG00000132467.2530.85240768.15780-0.533103.292002.24130K562TRIM56
    UTP3ENSG00000132467.21185.460701611.06550-0.442604.000703.15090K562UPF1
    UTP3ENSG00000132467.2521.141801370.01630-1.3944011.305109.08290K562UTP3
    UTP3ENSG00000132467.2823.769401378.55660-0.742807.696906.19480K562WDR3
    UTP3ENSG00000132467.21014.723201433.40990-0.498404.938103.83690K562WDR43
    UTP3ENSG00000132467.21493.45600918.668700.700903.240601.49750K562XRCC6
    UTP3ENSG00000132467.21729.906802320.15540-0.423503.568102.56500K562ZC3H8
    Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

    *: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
    **: "-log(0)" was displayed as "99999.99999".





    172 alternative splicing events after Knockdown/Knockout UTP3 protein :

    Only display 100 entries as example. Please click "View All" button to see all 172 entries.     

    Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
    SEATP5JENSG00000154723.8chr21-2710729927107341271019412710211227107625271077000.370000.000010.01278includedK562UTP3
    SEEPB41L2ENSG00000079819.12chr6-1311992431311993901311907021311912661312062351312064080.225000.000000.00081includedK562UTP3
    SEDGUOKENSG00000114956.15chr2+7416603674166149741540207415417974173845741740330.165000.000030.02890includedK562UTP3
    SESNRNP70ENSG00000104852.10chr19+4960537049606844496046464960472849607890496079920.055000.000000.00000includedK562UTP3
    SEVWDEENSG00000146530.7chr7-1239344012394113123911981239133912395736123959560.177000.000000.00205includedK562UTP3
    SEDIAPH1ENSG00000131504.11chr5-1409677901409678171409666081409667641409983641409986220.240000.000120.07201includedK562UTP3
    SEFADS3ENSG00000221968.4chr11-6164433761644435616438306164392761644982616450590.077000.000100.06540includedK562UTP3
    SEUSF2ENSG00000105698.11chr19+3576070535760825357604833576060235761661357617080.337000.000020.02449includedK562UTP3
    SENDUFV3ENSG00000160194.13chr21+4432329144324386443170364431715744328973443292150.118000.000010.01595includedK562UTP3
    SEWNK1ENSG00000060237.12chr12+9770319782709712489714369873779875270.095000.000030.03271includedK562UTP3
    SEPICALMENSG00000073921.13chr11-8568911285689136856876658568772585692171856922710.143000.000000.00080includedK562UTP3
    SEC16orf13ENSG00000130731.11chr16-6848886850636847186847976852806853400.147000.000030.03271includedK562UTP3
    SESRSF6ENSG00000124193.10chr20+4208779242088060420870004208714942088410420885350.159000.000110.06800includedK562UTP3
    SEEPB41ENSG00000159023.14chr1+2938693329386996293796152937982429391493293916700.112000.000010.01093includedK562UTP3
    SENONOENSG00000147140.11chrX+7050424670504303705034327050357170510478705106410.087000.000060.04761includedK562UTP3
    SERP11-729L2.2ENSG00000267699.2chr18+4857900448579095485756644857569448581150485813630.065000.000020.02217includedK562UTP3
    SEDDR1ENSG00000204580.7chr6+3086318030863291308622823086244830864397308646420.231000.000020.02324includedK562UTP3
    SERP11-6J24.6ENSG00000273061.1chr9-4679036467916546765994676749467938646795020.458000.000140.07614includedK562UTP3
    SESLC37A4ENSG00000137700.12chr11-1188994441188995441188989031188991361188999311189002740.130000.000130.07415includedK562UTP3
    SERPL31ENSG00000071082.6chr2+1016354591016356621016224201016225331016400861016404940.237000.000070.04978includedK562UTP3
    SEANKLE2ENSG00000176915.10chr12-1333183941333184771333180041333180711333197391333198620.099000.000130.07233includedK562UTP3
    SEMEIOBENSG00000162039.10chr16-1915778191583619119851912117191810719181860.206000.000010.01556includedK562UTP3
    SEMKNK1ENSG00000079277.15chr1-4703926547039367470377344703783947040618470406920.080000.000000.00647includedK562UTP3
    SETRNAU1APENSG00000180098.5chr1+2888762428887772288871442888724428887857288879100.069000.000070.04978includedK562UTP3
    SERBM39ENSG00000131051.16chr20-3432844634328519343268893432693934328745343288090.139000.000000.00127includedK562UTP3
    SEECT2ENSG00000114346.9chr3+1724732721724733651724730841724731641724747721724749550.127000.000040.03918includedK562UTP3
    SEZMYND8ENSG00000101040.15chr20-4584128645841411458393494583954245848908458489750.125000.000010.01250includedK562UTP3
    SERPL17ENSG00000265681.2chr18-4701810547018203470178864701795447018644470187690.151000.000010.01847includedK562UTP3
    SESRRM1ENSG00000133226.12chr1+2497356924973699249731572497328024975349249755200.158000.000050.04054includedK562UTP3
    SEHIST1H2ACENSG00000180573.8chr6+2612792526127989261244302612486126138281261393440.075000.000000.00233includedK562UTP3
    SETJP1ENSG00000104067.12chr15-3001198030012220300104693001134230012561300129120.101000.000040.03658includedK562UTP3
    SERPS24ENSG00000138326.14chr10+7979996179799983797969517979706279800372798004550.164000.000000.00000includedK562UTP3
    SEDGUOKENSG00000114956.15chr2+741738457417401574154019741541797418527274185372-0.148000.000170.08988excludedK562UTP3
    SETMCC1ENSG00000172765.12chr3-129599151129599402129567188129567255129612336129612394-0.584000.000010.01207excludedK562UTP3
    SETMEM219ENSG00000149932.12chr16+299833622998346129982728299828992998427029984369-0.124000.000020.02641excludedK562UTP3
    SEVWDEENSG00000146530.7chr7-123853641238558612383999123840951239119812391339-0.163000.000100.06540excludedK562UTP3
    SEDNAJC10ENSG00000077232.12chr2+183602104183602190183600975183601113183605025183605115-0.122000.000000.00706excludedK562UTP3
    SEMBNL1ENSG00000152601.13chr3+152164492152164546152163070152163328152165408152165562-0.147000.000010.01769excludedK562UTP3
    SEMBNL1ENSG00000152601.13chr3+152017193152018156151985828151986881152132729152132900-0.069000.000180.09308excludedK562UTP3
    SECTTNENSG00000085733.11chr11+702675757026768670266505702666167026904570269101-0.125000.000070.05200excludedK562UTP3
    SESEC31AENSG00000138674.12chr4-837633378376363483750152837502118376553883765662-0.059000.000140.07858excludedK562UTP3
    SEGPBP1L1ENSG00000159592.6chr1-461512474615129246126220461268974615272346152818-0.133000.000060.04758excludedK562UTP3
    SEPICALMENSG00000073921.13chr11-857012928570144285694908856950168570786885707972-0.098000.000120.07201excludedK562UTP3
    SECLUHP3ENSG00000131797.8chr16+317129833171317931711910317120593171385531714002-0.592000.000020.02449excludedK562UTP3
    SEHBE1ENSG00000213931.1chr11-536253353625925291028529138653670025367129-0.172000.000050.04488excludedK562UTP3
    SEMORF4L2ENSG00000123562.12chrX-102939608102939657102933426102933528102940098102940188-0.140000.000000.00647excludedK562UTP3
    SENT5DC3ENSG00000111696.7chr12-104182615104182697104181218104181305104186941104187043-0.121000.000170.08988excludedK562UTP3
    SEWSB1ENSG00000109046.10chr17+256347692563494525633807256339082563612525636298-0.293000.000000.00051excludedK562UTP3
    SEFIS1ENSG00000214253.4chr7-100887287100887420100884110100884187100895175100895572-0.064000.000110.06800excludedK562UTP3
    SEBRD8ENSG00000112983.13chr5-137493330137493583137492570137492956137495243137495288-0.235000.000010.01363excludedK562UTP3
    SEMTCH2ENSG00000109919.5chr11-476570964765712347656223476562864766025047660357-0.060000.000120.07076excludedK562UTP3
    SEBNIP1ENSG00000113734.13chr5+172578568172578697172573868172573961172581324172581416-0.159000.000180.09031excludedK562UTP3
    SEGOLGA2ENSG00000167110.12chr9-131029472131029553131028565131028604131029736131029796-0.103000.000160.08434excludedK562UTP3
    SEMRPL48ENSG00000175581.9chr11+735160717351612473498916734990377353675273536841-0.118000.000010.01556excludedK562UTP3
    SEDDX42ENSG00000198231.8chr17+618769186187698561875397618754596187782761877977-0.182000.000090.05955excludedK562UTP3
    SERBCK1ENSG00000125826.15chr20+391055391281390524390669398169398263-0.211000.000010.01093excludedK562UTP3
    SEPFKMENSG00000152556.11chr12+485290734852916648528725485288214853150348531629-0.161000.000010.01602excludedK562UTP3
    SEPRKRIP1ENSG00000128563.9chr7+102036423102036984102016658102016769102038066102038145-0.165000.000070.05026excludedK562UTP3
    SERNPEPENSG00000176393.6chr1+201958510201958659201958031201958172201965274201965391-0.097000.000030.02641excludedK562UTP3
    SEGNASENSG00000087460.19chr20+574739955747404057470666574707395747858557478640-0.115000.000110.06944excludedK562UTP3
    SEHAT1ENSG00000128708.8chr2+172803227172803303172782046172782151172821858172822038-0.106000.000010.01556excludedK562UTP3
    SERPL37AENSG00000197756.5chr2+217366063217366082217364671217364754217393992217394174-0.124000.000000.00286excludedK562UTP3
    A3SSFADS3ENSG00000221968.4chr11-6164383061644435616438306164392761644982616450590.067000.000060.08128longerK562UTP3
    A3SSMRS2ENSG00000124532.10chr6+2441524324415391244152602441539124412449244126230.086000.000050.08128longerK562UTP3
    A3SSPFDN6ENSG00000204220.5chr6+3325754633257697332576183325769733257078332573970.091000.000000.01094longerK562UTP3
    A3SSWSB1ENSG00000109046.10chr17+256347692563629825636125256362982563380725633908-0.284000.000000.00667shorterK562UTP3
    A3SSSNX5ENSG00000089006.12chr20-179346391793486717934639179347611793600817936119-0.107000.000020.03951shorterK562UTP3
    A3SSNUTM2A-AS1ENSG00000223482.3chr10-890058718900599389005871890059698904819889048252-0.093000.000050.08128shorterK562UTP3
    A3SSDDX39BENSG00000198563.9chr6-315080983150844131508098315083113150972631510225-0.115000.000040.08128shorterK562UTP3
    RINELFCDENSG00000101158.8chr20+5756867857569294575686785756881957569164575692940.143000.000000.00000includedK562UTP3
    RITHOC6ENSG00000131652.9chr16+3075924307628930759243075989307606330762890.212000.000220.04381includedK562UTP3
    RICPED1ENSG00000106034.13chr7+1206291041206299241206291041206293291206294441206299240.138000.000080.02085includedK562UTP3
    RIDPM2ENSG00000136908.13chr9-1306988311306998021306988311306989341306997121306998020.096000.000050.01455includedK562UTP3
    RIFTH1ENSG00000167996.11chr11-6173478361735103617347836173484361734929617351030.112000.000000.00008includedK562UTP3
    RIRIOK1ENSG00000124784.4chr6+7402835740313074028357402948740304974031300.084000.000030.00881includedK562UTP3
    RIMRPL2ENSG00000112651.7chr6-4302363443023934430236344302374543023818430239340.072000.000020.00813includedK562UTP3
    RISRSF7ENSG00000115875.14chr2-3897572038976847389757203897579538976670389768470.052000.000100.02446includedK562UTP3
    RIDDX5ENSG00000108654.7chr17-624982796249866762498279624983416249855662498667-0.083000.000000.00134excludedK562UTP3
    RISREK1ENSG00000153914.11chr5+654582416545975065458241654583116545961965459750-0.126000.000000.00185excludedK562UTP3
    RIARAP1ENSG00000186635.10chr11-724234827242428872423482724236137242422072424288-0.199000.000020.00722excludedK562UTP3
    RIRPS9ENSG00000170889.9chr19+547101435471059254710143547103305471042054710592-0.262000.000040.01105excludedK562UTP3
    RIEXOSC8ENSG00000120699.8chr13+375770703757869837577070375771443757861337578698-0.208000.000160.03684excludedK562UTP3
    RIMGAT4BENSG00000161013.12chr5-179226505179227068179226505179226636179226953179227068-0.076000.000190.03977excludedK562UTP3
    RIGAS5ENSG00000234741.3chr1-173834994173835344173834994173835032173835314173835344-0.073000.000000.00003excludedK562UTP3
    RIGAS5ENSG00000234741.3chr1-173833394173833644173833394173833442173833621173833644-0.076000.000000.00148excludedK562UTP3
    RIGAS5ENSG00000234741.3chr1-173833621173833842173833621173833644173833812173833842-0.092000.000010.00383excludedK562UTP3
    RIGAS5ENSG00000234741.3chr1-173835665173835934173835665173835705173835898173835934-0.087000.000000.00031excludedK562UTP3
    RIMETTL17ENSG00000165792.13chr14+214640592146445121464059214641102146436721464451-0.102000.000290.05710excludedK562UTP3
    RIRPL10AENSG00000198755.6chr6+354367233543730635436723354370623543715735437306-0.145000.000030.01049excludedK562UTP3
    RIATXN2LENSG00000168488.14chr16+288472532884855828847253288474432884804828848558-0.113000.000090.02137excludedK562UTP3
    RINDUFB10ENSG00000140990.10chr16+201149720119762011497201163720117972011976-0.167000.000020.00813excludedK562UTP3
    RISLC25A39ENSG00000013306.11chr17-423984254239892642398425423985994239880142398926-0.136000.000070.01890excludedK562UTP3
    MXESUPT20HENSG00000102710.15chr13-37598171375983303759847637598579375961473759645437599456375995740.153000.000180.052011includedK562UTP3
    MXENAP1L1ENSG00000187109.9chr12-76453917764540597646798276468019764498127644994176478346764784650.084000.000270.057631includedK562UTP3
    MXESNRNP70ENSG00000104852.10chr19+49605370496054304960790849607992496046464960472849610881496109690.062000.000050.019471includedK562UTP3
    MXEMED1ENSG00000125686.7chr17-37580879375809913758395337584043375799493758007437587367375874410.067000.000800.090701includedK562UTP3
    MXERELAENSG00000173039.14chr11-65427594654276866542915765429306654271366542726865429407654295590.107000.000910.094071includedK562UTP3
    MXELTBP4ENSG00000090006.13chr19+41129840411299874113176141131914411295084112963741132879411332600.077000.000960.094071includedK562UTP3
    MXEC14orf166ENSG00000087302.4chr14+52460440524605405246521152465298524580345245815952466425524665140.098000.000560.082261includedK562UTP3
    MXENAA60ENSG00000122390.13chr16+352947035296003532501353259835262213526337353336235335970.096000.000560.082261includedK562UTP3






    No RBPs affect the alternative splcing events of UTP3 on ENCORE database.





    No autoregularoty alternative splicing events between protein UTP3 and its RNA.