ZNF449

General Information

Gene Name       : ZNF449
Gene ID             : ENSG00000173275.12
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZNF449)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZNF449ENSG00000173275.122.842.192.51ENCSR000AEF
HepG2ZNF449ENSG00000173275.120.802.761.78ENCSR985KAT
K562ZNF449ENSG00000173275.123.303.133.21ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZNF449 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on ZNF449 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for ZNF449 is not avaliable on ENCORE database.






NO known proteins are bound to ZNF449 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for ZNF449 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZNF449 is not available on ENCORE database.

  • 46 RBPs can affect the levels of ZNF449.  








The Knockdown/knockout RNA-Seq assay for ZNF449 is not available on ENCORE database.





46 RBPs can affect the gene expression of ZNF449 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZNF449ENSG00000173275.8195.61030121.868300.682602.950802.25250HepG2DDX21
ZNF449ENSG00000173275.8214.21330129.092400.730502.814902.03540HepG2DDX55
ZNF449ENSG00000173275.8186.1008096.552300.946604.572803.57660HepG2FUBP3
ZNF449ENSG00000173275.8158.87350234.62670-0.562502.330201.70410HepG2HNRNPL
ZNF449ENSG00000173275.8328.52190186.056200.820205.466504.36330HepG2MSI2
ZNF449ENSG00000173275.8246.98380156.235400.660603.422002.06850HepG2NAA15
ZNF449ENSG00000173275.8230.24700124.904000.882305.684404.95670HepG2PTBP1
ZNF449ENSG00000173275.893.15070243.75330-1.3878010.299009.24740HepG2PUF60
ZNF449ENSG00000173275.8199.39440258.72760-0.375802.094101.56380HepG2PUM1
ZNF449ENSG00000173275.8308.30750135.257601.1886010.393609.29240HepG2QKI
ZNF449ENSG00000173275.8227.04080122.761200.887005.205104.30710HepG2RBM25
ZNF449ENSG00000173275.8230.26950138.999700.728103.922903.29960HepG2NELFE
ZNF449ENSG00000173275.8215.60360129.471000.735703.942203.22330HepG2RECQL
ZNF449ENSG00000173275.8212.64680130.027300.709503.633502.96910HepG2SF3B4
ZNF449ENSG00000173275.8134.45340240.63820-0.839805.898905.03470HepG2SRSF5
ZNF449ENSG00000173275.8110.43980184.53090-0.740603.826103.02730HepG2SRSF7
ZNF449ENSG00000173275.8304.52250122.011501.3194013.0335011.95290HepG2TAF15
ZNF449ENSG00000173275.8237.68590112.095301.084206.504905.22950HepG2TIA1
ZNF449ENSG00000173275.8138.13290205.14070-0.570602.836702.13020HepG2UPF1
ZNF449ENSG00000173275.8279.85810175.491300.673202.499301.49470HepG2XRCC6
ZNF449ENSG00000173275.8520.77980659.38810-0.340502.399501.86460K562AGGF1
ZNF449ENSG00000173275.8369.82860573.03010-0.631802.797001.72690K562CNOT7
ZNF449ENSG00000173275.8277.16770391.65760-0.498802.987702.17260K562CPSF6
ZNF449ENSG00000173275.8381.84530520.46880-0.446803.617602.88490K562DDX47
ZNF449ENSG00000173275.8117.70380199.32340-0.760003.414602.39510K562EFTUD2
ZNF449ENSG00000173275.8159.29970261.20520-0.713404.696903.67190K562EIF3G
ZNF449ENSG00000173275.8389.01130568.01340-0.546103.868702.76030K562EIF4G2
ZNF449ENSG00000173275.8294.52710398.46670-0.436102.222701.45420K562FMR1
ZNF449ENSG00000173275.8168.31990349.79310-1.0553010.581709.48410K562FXR1
ZNF449ENSG00000173275.8233.46560373.95130-0.679604.543603.52880K562GPKOW
ZNF449ENSG00000173275.8123.36020303.86490-1.300605.644204.82160K562HNRNPC
ZNF449ENSG00000173275.8330.68540470.39120-0.508403.498102.29230K562HNRNPL
ZNF449ENSG00000173275.8248.26850425.37720-0.776806.936405.39060K562MATR3
ZNF449ENSG00000173275.8245.06300365.01200-0.574803.433202.45280K562METAP2
ZNF449ENSG00000173275.8402.55870605.40300-0.588704.310902.90510K562MSI2
ZNF449ENSG00000173275.8261.51630355.93320-0.444702.770101.96050K562MTPAP
ZNF449ENSG00000173275.8434.56780621.41110-0.516003.372601.70310K562NOL12
ZNF449ENSG00000173275.8252.03050379.25920-0.589603.543302.43950K562PCBP2
ZNF449ENSG00000173275.8144.59690203.93530-0.496102.071001.37850K562POLR2G
ZNF449ENSG00000173275.899.35050193.96370-0.965204.373503.43180K562PRPF8
ZNF449ENSG00000173275.8155.52470414.07570-1.4128011.220609.94370K562PTBP1
ZNF449ENSG00000173275.8420.53240619.71100-0.559403.897902.93480K562PUF60
ZNF449ENSG00000173275.8518.02100662.99130-0.356002.389601.83190K562RBM15
ZNF449ENSG00000173275.8237.53450397.15940-0.741605.779904.50870K562RBM22
ZNF449ENSG00000173275.8244.04160417.92100-0.776106.080304.37010K562NELFE
ZNF449ENSG00000173275.8288.02210415.03120-0.527003.853702.83970K562SF3B4
ZNF449ENSG00000173275.8276.53850492.48230-0.832603.603202.03350K562SFPQ
ZNF449ENSG00000173275.8237.61450405.90960-0.772506.276605.22260K562SRSF1
ZNF449ENSG00000173275.8279.58940388.65710-0.475202.475401.48680K562SRSF4
ZNF449ENSG00000173275.8614.41770391.944700.648502.915201.39900K562TAF15
ZNF449ENSG00000173275.8142.37550410.85580-1.5289018.2358016.11190K562TARDBP
ZNF449ENSG00000173275.8246.11170396.30400-0.687305.253804.07370K562TIA1
ZNF449ENSG00000173275.8484.30590358.826800.432502.754601.87840K562WDR3
ZNF449ENSG00000173275.8126.09280202.38420-0.682602.882601.64500K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZNF449 is not available on ENCORE database.





1 RBPs can affect the splicing of ZNF449 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEZNF449ENSG00000173275.8chrX+1344826781344827621344809431344813971344830341344832390.218000.000430.07741includedK562SBDS

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ZNF449 is not avaliable on ENCORE database.