ZFYVE20

General Information

Gene Name : ZFYVE20
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ZFYVE20)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ZFYVE20 is not avaliable on ENCORE database.

Proteins bound to RNA

ZFYVE20 RNA is bound by 23 proteins.

eCLIP assay for ZFYVE20 is not avaliable on ENCORE database.

23 proteins are bound to ZFYVE20 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr3	15111947	15112087	-	3'-UTR,intron-Distal	4.64390	4.77152	K562	IGF2BP1
chr3	15131942	15132004	-	3'-UTR,CDS,intron-Distal	4.89843	4.90367	K562	ZNF622
chr3	15127434	15127489	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.50225	4.64851	K562	U2AF1
chr3	15114475	15114567	-	3'-UTR,intron-Distal	3.49286	5.69025	HepG2	UPF1
chr3	15122183	15122319	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.86965	5.58150	K562	SF3B4
chr3	15111993	15112149	-	3'-UTR,intron-Distal	4.99213	11.84897	K562	PUM2
chr3	15111690	15111765	-	3'-UTR,intron-Distal	5.93021	9.28899	K562	PABPC4
chr3	15137729	15137806	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	3.55117	6.08780	K562	U2AF2
chr3	15116394	15116459	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.30211	4.87883	K562	BUD13
chr3	15137692	15137752	-	3'-UTR,5'-UTR,intron-Distal	3.56613	4.24220	K562	ZNF622
chr3	15122251	15122324	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.78459	4.00320	K562	AQR
chr3	15127424	15127488	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.30943	5.37652	K562	BUD13
chr3	15131899	15131964	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.58034	4.70478	HepG2	BCLAF1
chr3	15137744	15137809	-	3'-UTR,5'-UTR,intron-Distal,intron-Proximal	4.77042	5.12844	K562	U2AF1
chr3	15127422	15127489	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.30560	6.26692	K562	U2AF2
chr3	15127425	15127484	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.52005	3.62357	HepG2	U2AF2
chr3	15116424	15116481	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.02731	4.09264	K562	AQR
chr3	15116350	15116442	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.48196	7.00086	K562	DDX24
chr3	15140495	15140543	-	5'-UTR,intron-Distal	4.01963	6.80869	K562	AQR
chr3	15117091	15117171	-	CDS,intron-Distal,intron-Proximal	5.05410	6.58593	HepG2	BCLAF1
chr3	15137425	15137457	-	CDS,intron-Distal,intron-Proximal	4.04985	5.47926	K562	AQR
chr3	15124084	15124147	-	CDS,intron-Distal,intron-Proximal	5.65132	10.23313	K562	DGCR8
chr3	15137401	15137484	-	CDS,intron-Distal,intron-Proximal	4.11959	5.64238	K562	PRPF8
chr3	15117059	15117132	-	CDS,intron-Distal,intron-Proximal	4.89579	4.65563	K562	AQR
chr3	15137432	15137519	-	CDS,intron-Distal,intron-Proximal	3.11181	6.55928	HepG2	PRPF8
chr3	15137464	15137480	-	CDS,intron-Distal,intron-Proximal	3.78459	4.00320	K562	AQR
chr3	15137478	15137543	-	CDS,intron-Distal,intron-Proximal	3.47606	3.69481	K562	UCHL5
chr3	15117086	15117186	-	CDS,intron-Distal,intron-Proximal	4.39869	4.67689	HepG2	PPIG
chr3	15137480	15137551	-	CDS,intron-Distal,intron-Proximal	3.42259	3.57857	HepG2	BCLAF1
chr3	15117094	15117183	-	CDS,intron-Distal,intron-Proximal	5.27444	5.10740	K562	DDX24
chr3	15137491	15137586	-	CDS,intron-Distal,intron-Proximal	3.59459	6.84505	K562	ZNF622
chr3	15115429	15115481	-	CDS,intron-Distal	3.29478	3.73423	K562	UCHL5
chr3	15115319	15115398	-	CDS,intron-Distal	4.85634	7.65820	K562	LIN28B
chr3	15119510	15119589	-	CDS,intron-Distal,intron-Proximal	5.32330	7.21051	K562	PRPF8
chr3	15115922	15115975	-	CDS,intron-Distal	5.18267	7.58445	K562	RBM15
chr3	15118581	15118668	-	CDS,intron-Distal	3.37811	4.74755	K562	ZNF622
chr3	15115889	15115922	-	CDS,intron-Distal	4.31606	3.51664	K562	RBM15
chr3	15140145	15140297	-	intron-Distal	4.44098	13.52172	K562	TARDBP
chr3	15132127	15132250	-	intron-Distal,intron-Proximal	3.53254	4.30679	K562	KHSRP
chr3	15140044	15140107	-	intron-Distal	4.79950	5.76606	K562	EXOSC5
chr3	15139425	15139527	-	intron-Distal,intron-Proximal	4.95725	7.06230	K562	EXOSC5
chr3	15140020	15140082	-	intron-Distal	4.63114	8.85086	K562	EIF4G2
chr3	15140415	15140459	-	intron-Distal	4.79095	5.59072	K562	EIF4G2
chr3	15123822	15123874	-	intron-Distal,intron-Proximal	4.74336	4.65563	K562	AQR
chr3	15130880	15130967	-	intron-Distal	3.30621	3.76025	HepG2	ILF3
chr3	15140340	15140395	-	intron-Distal	4.32214	3.34609	K562	TARDBP
chr3	15122172	15122233	-	intron-Distal,intron-Proximal	4.85334	4.13847	K562	AQR
chr3	15140388	15140436	-	intron-Distal	4.68697	6.08953	K562	EXOSC5
chr3	15119536	15119573	-	intron-Distal,intron-Proximal	4.19737	4.49024	K562	AQR
chr3	15140227	15140310	-	intron-Distal	4.88979	5.12432	K562	EXOSC5
chr3	15119573	15119582	-	intron-Distal,intron-Proximal	3.44520	3.94787	K562	AQR
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for ZFYVE20 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ZFYVE20 is not available on ENCORE database.
37 RBPs can affect the levels of ZFYVE20.

The Knockdown/knockout RNA-Seq assay for ZFYVE20 is not available on ENCORE database.

37 RBPs can affect the gene expression of ZFYVE20 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ZFYVE20	ENSG00000131381.8	563.77940	773.49290	-0.45630	2.96380	2.15190	HepG2	ASCC1
ZFYVE20	ENSG00000131381.8	1122.11410	944.12040	0.24910	2.29880	1.66310	HepG2	AUH
ZFYVE20	ENSG00000131381.8	559.90680	700.43990	-0.32310	2.93650	2.25580	HepG2	CKAP4
ZFYVE20	ENSG00000131381.8	211.97890	294.61170	-0.47490	2.39990	1.39500	HepG2	CSTF2
ZFYVE20	ENSG00000131381.8	1203.44340	872.98260	0.46300	7.97010	6.80790	HepG2	DAZAP1
ZFYVE20	ENSG00000131381.8	503.74110	684.60200	-0.44260	3.44690	2.51240	HepG2	EWSR1
ZFYVE20	ENSG00000131381.8	611.64650	413.96550	0.56310	4.45920	3.47600	HepG2	FUBP3
ZFYVE20	ENSG00000131381.8	574.07320	463.73650	0.30780	2.14140	1.50380	HepG2	HNRNPF
ZFYVE20	ENSG00000131381.8	962.67050	795.19540	0.27560	2.94920	2.25520	HepG2	HNRNPL
ZFYVE20	ENSG00000131381.8	629.67310	829.43370	-0.39750	2.19760	1.63210	HepG2	MATR3
ZFYVE20	ENSG00000131381.8	1050.72300	705.53320	0.57450	2.90390	1.99340	HepG2	PABPC1
ZFYVE20	ENSG00000131381.8	396.40140	525.28530	-0.40610	2.55160	1.80620	HepG2	PRPF4
ZFYVE20	ENSG00000131381.8	563.70860	826.36360	-0.55180	5.00930	4.23640	HepG2	PUF60
ZFYVE20	ENSG00000131381.8	707.95950	877.24810	-0.30930	3.02840	2.41390	HepG2	PUM1
ZFYVE20	ENSG00000131381.8	1146.09530	855.41200	0.42190	4.57930	3.80440	HepG2	QKI
ZFYVE20	ENSG00000131381.8	639.85470	905.99730	-0.50180	4.02750	3.43280	HepG2	RBM22
ZFYVE20	ENSG00000131381.8	664.98240	818.80440	-0.30020	2.32840	1.75630	HepG2	RECQL
ZFYVE20	ENSG00000131381.8	674.36390	499.56370	0.43280	2.83690	2.14660	HepG2	RPLP0
ZFYVE20	ENSG00000131381.8	267.17240	372.63770	-0.48000	2.30530	1.73840	HepG2	RPS19
ZFYVE20	ENSG00000131381.8	947.70080	721.12630	0.39410	1.89930	1.33790	HepG2	SF3A3
ZFYVE20	ENSG00000131381.8	388.02300	522.25100	-0.42860	2.97940	2.31540	HepG2	SMN1
ZFYVE20	ENSG00000131381.8	656.24190	815.94570	-0.31420	2.58980	1.97960	HepG2	SRSF5
ZFYVE20	ENSG00000131381.8	867.37060	698.35820	0.31260	1.95520	1.47600	HepG2	SRSF9
ZFYVE20	ENSG00000131381.8	320.00510	466.92750	-0.54510	3.20780	2.48550	HepG2	SUPV3L1
ZFYVE20	ENSG00000131381.8	965.95320	771.62780	0.32390	2.95300	2.37580	HepG2	TAF15
ZFYVE20	ENSG00000131381.8	1087.74480	708.92410	0.61750	8.24560	6.81110	HepG2	TIA1
ZFYVE20	ENSG00000131381.8	339.16780	488.69230	-0.52690	4.04080	3.46080	HepG2	TIAL1
ZFYVE20	ENSG00000131381.8	429.96470	558.16250	-0.37650	2.26900	1.69430	HepG2	U2AF1
ZFYVE20	ENSG00000131381.8	1126.39720	1514.92910	-0.42750	6.38560	5.57570	K562	AGGF1
ZFYVE20	ENSG00000131381.8	4122.61750	1817.98050	1.18110	30.51700	28.76360	K562	AQR
ZFYVE20	ENSG00000131381.8	3226.64490	2721.93740	0.24530	2.56620	1.62750	K562	CELF1
ZFYVE20	ENSG00000131381.8	1537.82020	1113.43680	0.46580	4.75440	3.67810	K562	EIF4A3
ZFYVE20	ENSG00000131381.8	1168.38440	794.01810	0.55720	6.19430	5.33690	K562	HNRNPC
ZFYVE20	ENSG00000131381.8	1466.07800	1201.43050	0.28710	3.31890	2.43650	K562	MTPAP
ZFYVE20	ENSG00000131381.8	1287.78590	1563.39920	-0.27980	2.06480	1.58280	K562	PUS1
ZFYVE20	ENSG00000131381.8	748.82920	957.46740	-0.35460	2.03300	1.33890	K562	RPS19
ZFYVE20	ENSG00000131381.8	1610.71010	1349.49520	0.25520	3.12860	2.14030	K562	SRPK2
ZFYVE20	ENSG00000131381.8	1654.94470	1415.43120	0.22540	2.42010	1.74640	K562	UPF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ZFYVE20 is not available on ENCORE database.

11 RBPs can affect the splicing of ZFYVE20 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	ZFYVE20	ENSG00000131381.8	chr3	-	15132845	15133000			15131847	15132046	15137479	15137795	-0.08000	0.01068	0.08555	excluded	K562	AQR
SE	ZFYVE20	ENSG00000131381.8	chr3	-	15139625	15139781			15138041	15138217	15140541	15140655	-0.24900	0.00100	0.01705	excluded	K562	PUS1
SE	ZFYVE20	ENSG00000131381.8	chr3	-	15132845	15133000			15131905	15132046	15137479	15137795	-0.13500	0.00151	0.06917	excluded	K562	EFTUD2
SE	ZFYVE20	ENSG00000131381.8	chr3	-	15135788	15136013			15131905	15132046	15137479	15137795	0.18400	0.00470	0.08454	included	HepG2	SRSF1
SE	ZFYVE20	ENSG00000131381.8	chr3	-	15139625	15139781			15138041	15138217	15140541	15140655	-0.66200	0.00000	0.00000	excluded	K562	TARDBP
SE	ZFYVE20	ENSG00000131381.8	chr3	-	15139625	15139781			15138041	15138217	15140541	15140655	-0.28000	0.00051	0.01621	excluded	K562	AGGF1
SE	ZFYVE20	ENSG00000131381.8	chr3	-	15131641	15131760			15127367	15127468	15131905	15132046	0.47500	0.00118	0.02203	included	K562	HNRNPC
A3SS	ZFYVE20	ENSG00000131381.8	chr3	-	15126506	15126664			15126506	15126552	15127367	15127468	0.39000	0.00001	0.00097	longer	K562	U2AF2
A3SS	ZFYVE20	ENSG00000131381.8	chr3	-	15117112	15117345			15117112	15117217	15118568	15118671	0.10100	0.00000	0.00000	longer	K562	AQR
A3SS	ZFYVE20	ENSG00000131381.8	chr3	-	15119581	15119820			15119581	15119668	15122238	15122309	0.08200	0.00002	0.00016	longer	K562	AQR
MXE	ZFYVE20	ENSG00000131381.8	chr3	-	15131641	15131847	15131905	15132046	15127367	15127468	15137479	15137795	0.22800	0.00260	0.04457	1included	HepG2	U2AF1
MXE	ZFYVE20	ENSG00000131381.8	chr3	-	15132845	15133000	15135788	15136013	15131910	15132046	15137479	15137795	0.18400	0.00448	0.09269	1included	K562	RBM15
MXE	ZFYVE20	ENSG00000131381.8	chr3	-	15131641	15131847	15131905	15132046	15127367	15127468	15137479	15137795	-0.26200	0.00003	0.00109	2included	K562	HNRNPC
MXE	ZFYVE20	ENSG00000131381.8	chr3	-	15131641	15131847	15131905	15132046	15127367	15127468	15137479	15137795	-0.23400	0.00077	0.02909	2included	K562	DDX55

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ZFYVE20

General Information

Functions

Localization

Domains (AlphaFold: ZFYVE20)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ZFYVE20 is not avaliable on ENCORE database.

23 proteins are bound to ZFYVE20 RNA:

eCLIP assay for ZFYVE20 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ZFYVE20 is not available on ENCORE database.

37 RBPs can affect the gene expression of ZFYVE20 :

The Knockdown/knockout RNA-Seq assay for ZFYVE20 is not available on ENCORE database.

11 RBPs can affect the splicing of ZFYVE20 :

The Knockdown/knockout RNA-Seq assay for ZFYVE20 is not avaliable on ENCORE database.