ZDHHC20

General Information

Gene Name       : ZDHHC20
Gene ID             : ENSG00000180776.15
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZDHHC20)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZDHHC20ENSG00000180776.1529.1539.3234.23ENCSR000AEF
HepG2ZDHHC20ENSG00000180776.1515.9335.2525.59ENCSR985KAT
K562ZDHHC20ENSG00000180776.159.2610.609.93ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZDHHC20 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZDHHC20 RNA is bound by 8 proteins.  







eCLIP assay for ZDHHC20 is not avaliable on ENCORE database.





8 proteins are bound to ZDHHC20 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr132203330422033346-5'-UTR,CDS,intron-Distal6.2748219.89746HepG2DDX3X
chr132203334622033425-5'-UTR,intron-Distal,intron-Proximal5.4554947.70560HepG2DDX3X
chr132203334222033423-5'-UTR,intron-Distal,intron-Proximal4.197464.69071HepG2GRWD1
chr132203314722033218-5'-UTR,CDS,intron-Distal3.552196.18341HepG2PRPF8
chr132203319822033242-5'-UTR,CDS,intron-Distal4.897754.66990HepG2DDX3X
chr132203324922033304-5'-UTR,CDS,intron-Distal6.1347116.92762HepG2DDX3X
chr132195709321957144-CDS,intron-Distal4.761625.37137HepG2BCLAF1
chr132202972122029822-intron-Distal3.781485.38424HepG2HNRNPL
chr132203306122033106-intron-Distal5.148975.11689HepG2RBM22
chr132202868722028785-intron-Distal4.803595.75114HepG2PTBP1
chr132200328922003356-intron-Distal3.151914.90436HepG2HLTF
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZDHHC20 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZDHHC20 is not available on ENCORE database.

  • 48 RBPs can affect the levels of ZDHHC20.  








The Knockdown/knockout RNA-Seq assay for ZDHHC20 is not available on ENCORE database.





48 RBPs can affect the gene expression of ZDHHC20 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZDHHC20ENSG00000180776.11362.88400585.60430-0.690407.927806.86330HepG2AUH
ZDHHC20ENSG00000180776.11130.64210383.94510-1.555306.737105.23710HepG2BCCIP
ZDHHC20ENSG00000180776.11698.35500423.886200.720203.859502.95440HepG2CIRBP
ZDHHC20ENSG00000180776.11336.94100447.56030-0.409603.257002.46360HepG2DAZAP1
ZDHHC20ENSG00000180776.11466.33980316.455700.559302.189301.32370HepG2DDX59
ZDHHC20ENSG00000180776.11263.11270443.56850-0.753502.220301.66130HepG2DDX6
ZDHHC20ENSG00000180776.11213.21440296.01450-0.473402.641501.95060HepG2DNAJC21
ZDHHC20ENSG00000180776.1177.12120293.35500-1.9274026.2747024.46370HepG2DNAJC2
ZDHHC20ENSG00000180776.1161.51640426.60450-2.7939011.9816010.80290HepG2EIF2S1
ZDHHC20ENSG00000180776.11258.28000422.95250-0.711604.077803.10270HepG2EIF4G2
ZDHHC20ENSG00000180776.11237.58420407.70220-0.779108.013106.92120HepG2HNRNPL
ZDHHC20ENSG00000180776.11132.73930330.20360-1.3148015.6211014.27840HepG2HNRNPU
ZDHHC20ENSG00000180776.11260.23750341.06370-0.390202.051901.42230HepG2IGF2BP1
ZDHHC20ENSG00000180776.11229.57140337.29460-0.555104.253503.36330HepG2ILF2
ZDHHC20ENSG00000180776.11289.02350478.35720-0.726902.325701.74380HepG2MATR3
ZDHHC20ENSG00000180776.11183.62760443.79830-1.2731016.7712014.98660HepG2NOL12
ZDHHC20ENSG00000180776.11240.62840326.86400-0.441902.587401.76500HepG2PARN
ZDHHC20ENSG00000180776.11202.00360379.07530-0.908104.475303.73490HepG2PCBP1
ZDHHC20ENSG00000180776.11212.19370294.51790-0.473002.664201.93960HepG2PPIL4
ZDHHC20ENSG00000180776.11225.03690385.67580-0.777203.885503.26170HepG2PTBP1
ZDHHC20ENSG00000180776.11355.11910449.37610-0.339601.903301.34120HepG2PUM2
ZDHHC20ENSG00000180776.11140.87130439.15330-1.6403028.7244027.12800HepG2PUS1
ZDHHC20ENSG00000180776.11261.92730561.94230-1.1013014.8477013.84150HepG2RBM22
ZDHHC20ENSG00000180776.11558.59660379.140000.559002.173401.57040HepG2RBM25
ZDHHC20ENSG00000180776.11240.69940373.13380-0.632504.062103.26030HepG2RPLP0
ZDHHC20ENSG00000180776.11120.23240215.99290-0.845204.575203.80540HepG2RPS19
ZDHHC20ENSG00000180776.11288.20100398.00730-0.465702.398101.40190HepG2RPS5
ZDHHC20ENSG00000180776.11166.10440298.41110-0.845205.083604.14950HepG2SF3B1
ZDHHC20ENSG00000180776.11248.17390342.95010-0.466603.172502.49120HepG2SMN1
ZDHHC20ENSG00000180776.11490.82290332.032400.563802.525701.78070HepG2SNRNP70
ZDHHC20ENSG00000180776.11413.38460634.70470-0.618605.093204.47180HepG2SRFBP1
ZDHHC20ENSG00000180776.11555.53920419.173200.406202.001001.58110HepG2SRSF1
ZDHHC20ENSG00000180776.11638.62790418.267200.610506.265205.37670HepG2SRSF5
ZDHHC20ENSG00000180776.11133.81880245.72770-0.876804.888703.38380HepG2STIP1
ZDHHC20ENSG00000180776.11143.56010293.82060-1.033307.131306.04260HepG2TARDBP
ZDHHC20ENSG00000180776.11202.88960320.91120-0.661504.549603.94210HepG2TIAL1
ZDHHC20ENSG00000180776.11222.11500323.71900-0.543403.173702.57920HepG2TRIM56
ZDHHC20ENSG00000180776.1161.07780222.04200-1.862108.680107.33230HepG2UCHL5
ZDHHC20ENSG00000180776.11103.95530344.27450-1.727607.127305.46960HepG2UPF2
ZDHHC20ENSG00000180776.11251.99990381.93810-0.599904.550003.24640HepG2UTP18
ZDHHC20ENSG00000180776.11262.27350358.74290-0.451902.640902.05540HepG2UTP3
ZDHHC20ENSG00000180776.1195.65590369.94530-1.951409.363408.05060HepG2XRN2
ZDHHC20ENSG00000180776.1192.82550149.35420-0.686102.835101.60960K562EIF2S1
ZDHHC20ENSG00000180776.11153.8904088.249500.802103.047702.42450K562HNRNPC
ZDHHC20ENSG00000180776.11112.74820182.41080-0.694103.218802.25880K562HNRNPU
ZDHHC20ENSG00000180776.11117.69340180.42490-0.616402.334701.59940K562HSPD1
ZDHHC20ENSG00000180776.11192.03900316.62920-0.721404.117102.27840K562NOL12
ZDHHC20ENSG00000180776.1135.2465079.12650-1.166702.555901.69230K562PSIP1
ZDHHC20ENSG00000180776.1195.49990183.87950-0.945205.466504.56070K562PTBP1
ZDHHC20ENSG00000180776.11435.08080315.864800.461902.551201.76870K562PUF60
ZDHHC20ENSG00000180776.1160.56730111.60230-0.881802.533501.60340K562SF3B1
ZDHHC20ENSG00000180776.11161.8602080.876701.000902.872301.61470K562SNRNP200
ZDHHC20ENSG00000180776.11229.30150147.687400.634603.425102.53370K562U2AF2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZDHHC20 is not available on ENCORE database.





10 RBPs can affect the splicing of ZDHHC20 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEZDHHC20ENSG00000180776.11chr13-2195279921952877219502622195079421955572219556880.376000.000200.00572includedK562SRSF1
SEZDHHC20ENSG00000180776.11chr13-2195603921956084219555722195568821957058219571480.282000.000370.01175includedHepG2HNRNPK
SEZDHHC20ENSG00000180776.11chr13-2199979021999817219951992199530322033192220334140.067000.000240.00422includedHepG2U2AF2
SEZDHHC20ENSG00000180776.11chr13-219643332196455221961646219617732196586021965993-0.169000.001310.04898excludedK562FXR1
SEZDHHC20ENSG00000180776.11chr13-2199979021999817219951992199530322033192220334140.077000.000130.02630includedHepG2HNRNPUL1
SEZDHHC20ENSG00000180776.11chr13-2195279921952877219502622195079421955572219556880.359000.000000.00000includedHepG2SRSF1
SEZDHHC20ENSG00000180776.11chr13-2195603921956084219555722195568821957058219571480.354000.000600.04643includedHepG2IGF2BP3
SEZDHHC20ENSG00000180776.11chr13-2195279921952877219502622195079421955572219556880.285000.000410.02380includedHepG2PCBP1
SEZDHHC20ENSG00000180776.11chr13-2195279921952877219502622195079421955572219556880.170000.000190.01739includedHepG2SRSF9
SEZDHHC20ENSG00000180776.11chr13-2195279921952877219502622195079421955572219556880.349000.003260.04991includedK562HNRNPC
A3SSZDHHC20ENSG00000180776.11chr13-2198779021987929219877902198791121995199219953030.229000.000040.00041longerK562AQR
A3SSZDHHC20ENSG00000180776.11chr13-2196586021966029219658602196599321974511219746320.244000.000590.00435longerK562AQR
A3SSZDHHC20ENSG00000180776.11chr13-2196164621961808219616462196177321965860219659930.106000.006560.03669longerK562AQR
MXEZDHHC20ENSG00000180776.11chr13-2198779021987911219951992199530321976935219770052203319222033447-0.190000.001510.011462includedHepG2U2AF2

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ZDHHC20 is not avaliable on ENCORE database.