RP11-252A24.2

General Information

Gene Name : RP11-252A24.2
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP11-252A24.2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP11-252A24.2 is not avaliable on ENCORE database.

Proteins bound to RNA

RP11-252A24.2 RNA is bound by 9 proteins.

eCLIP assay for RP11-252A24.2 is not avaliable on ENCORE database.

9 proteins are bound to RP11-252A24.2 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr16	74382836	74382886	-	intron-Distal	3.41960	3.64266	HepG2	PPIG
chr16	74382778	74382901	-	intron-Distal	3.62626	3.05512	HepG2	PRPF4
chr16	74401960	74402066	-	intron-Distal,intron-Proximal	3.81420	8.96170	HepG2	NCBP2
chr16	74389501	74389553	-	intron-Distal	3.98078	8.00898	K562	AGGF1
chr16	74372451	74372476	-	intron-Distal	3.39337	6.28230	HepG2	PPIG
chr16	74372635	74372666	-	intron-Distal,intron-Proximal	3.17666	5.69345	HepG2	BCLAF1
chr16	74389493	74389574	-	intron-Distal	4.54134	11.81106	HepG2	HNRNPL
chr16	74368782	74368833	-	intron-Distal,intron-Proximal	3.53178	7.82075	HepG2	PPIG
chr16	74366515	74366555	-	intron-Distal,intron-Proximal	3.49859	5.97823	HepG2	BCLAF1
chr16	74378754	74378836	-	intron-Distal,intron-Proximal	5.54908	9.32793	HepG2	BCLAF1
chr16	74372635	74372678	-	intron-Distal,intron-Proximal	3.86522	10.57119	HepG2	PPIG
chr16	74394607	74394670	-	intron-Distal	3.40026	5.60389	HepG2	PPIG
chr16	74371292	74371373	-	intron-Distal,intron-Proximal	4.03867	4.89208	K562	AQR
chr16	74372451	74372477	-	intron-Distal,intron-Proximal	3.24259	5.00751	HepG2	BCLAF1
chr16	74389492	74389589	-	intron-Distal	4.93561	8.84337	K562	HNRNPL
chr16	74382764	74382829	-	intron-Distal,intron-Proximal	3.64792	7.83567	HepG2	BCLAF1
chr16	74372341	74372381	-	intron-Distal,intron-Proximal	3.53911	4.34695	HepG2	BCLAF1
chr16	74401309	74401381	-	intron-Distal	3.35684	3.98726	HepG2	RBFOX2
chr16	74394601	74394687	-	intron-Distal	3.24128	4.02291	HepG2	GRWD1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RP11-252A24.2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for RP11-252A24.2 is not available on ENCORE database.
45 RBPs can affect the levels of RP11-252A24.2.

The Knockdown/knockout RNA-Seq assay for RP11-252A24.2 is not available on ENCORE database.

45 RBPs can affect the gene expression of RP11-252A24.2 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
RP11-252A24.2	ENSG00000214331.4	185.52880	110.68810	0.74500	2.61130	2.09370	HepG2	AKAP1
RP11-252A24.2	ENSG00000214331.4	223.58880	142.14420	0.65340	2.98450	2.36570	HepG2	BOP1
RP11-252A24.2	ENSG00000214331.4	162.55500	99.45780	0.70870	2.16750	1.49500	HepG2	CNOT7
RP11-252A24.2	ENSG00000214331.4	162.27850	96.77690	0.74560	2.69100	2.06070	HepG2	EIF4A3
RP11-252A24.2	ENSG00000214331.4	208.52130	94.21290	1.14610	4.77900	3.89050	HepG2	EIF4B
RP11-252A24.2	ENSG00000214331.4	197.27200	97.62320	1.01480	5.06920	4.15360	HepG2	FXR1
RP11-252A24.2	ENSG00000214331.4	204.04010	90.57070	1.17160	6.68660	5.67290	HepG2	G3BP1
RP11-252A24.2	ENSG00000214331.4	158.95040	96.13820	0.72530	2.60880	1.74610	HepG2	G3BP2
RP11-252A24.2	ENSG00000214331.4	187.32880	91.68570	1.03070	4.93750	4.02560	HepG2	HNRNPK
RP11-252A24.2	ENSG00000214331.4	152.83870	92.59640	0.72290	2.23210	1.34400	HepG2	KHSRP
RP11-252A24.2	ENSG00000214331.4	189.78910	97.65720	0.95850	4.53810	3.70300	HepG2	MAGOH
RP11-252A24.2	ENSG00000214331.4	260.26670	98.20710	1.40600	9.25750	8.15930	HepG2	MATR3
RP11-252A24.2	ENSG00000214331.4	221.25090	100.52320	1.13810	6.23950	5.30480	HepG2	NCBP2
RP11-252A24.2	ENSG00000214331.4	139.99530	89.53500	0.64480	2.10130	1.46370	HepG2	PABPC4
RP11-252A24.2	ENSG00000214331.4	159.95000	99.75760	0.68100	2.60230	2.06880	HepG2	PTBP1
RP11-252A24.2	ENSG00000214331.4	285.25820	189.02800	0.59360	4.14600	3.45170	HepG2	PUM1
RP11-252A24.2	ENSG00000214331.4	197.86580	111.03750	0.83340	2.88730	2.33710	HepG2	NELFE
RP11-252A24.2	ENSG00000214331.4	192.59760	103.38570	0.89750	3.94860	3.22880	HepG2	RECQL
RP11-252A24.2	ENSG00000214331.4	249.77550	155.47700	0.68380	2.50440	1.76210	HepG2	SNRNP70
RP11-252A24.2	ENSG00000214331.4	198.91800	310.17740	-0.64090	4.53130	3.93540	HepG2	SRFBP1
RP11-252A24.2	ENSG00000214331.4	188.79870	108.43110	0.80000	2.91560	2.43380	HepG2	SRSF1
RP11-252A24.2	ENSG00000214331.4	279.25740	175.81800	0.66740	3.59310	2.89660	HepG2	SRSF5
RP11-252A24.2	ENSG00000214331.4	285.15540	199.95010	0.51200	3.03910	2.39260	HepG2	SUCLG1
RP11-252A24.2	ENSG00000214331.4	201.07440	97.42080	1.04530	6.18060	5.39920	HepG2	TAF15
RP11-252A24.2	ENSG00000214331.4	90.83060	149.46780	-0.71860	2.05380	1.42150	HepG2	XRN2
RP11-252A24.2	ENSG00000214331.4	206.51340	265.30380	-0.36140	1.78300	1.31810	HepG2	ZNF622
RP11-252A24.2	ENSG00000214331.4	71.54290	128.32290	-0.84290	3.13410	2.53600	K562	AGGF1
RP11-252A24.2	ENSG00000214331.4	71.36590	140.99710	-0.98240	4.42530	3.11350	K562	AKAP8
RP11-252A24.2	ENSG00000214331.4	86.14560	133.52320	-0.63220	2.07490	1.50670	K562	AKAP8L
RP11-252A24.2	ENSG00000214331.4	89.77220	140.09320	-0.64200	2.41290	1.56470	K562	ATP5C1
RP11-252A24.2	ENSG00000214331.4	266.37890	183.26090	0.53950	2.96090	2.28870	K562	DDX47
RP11-252A24.2	ENSG00000214331.4	89.43380	143.69640	-0.68410	2.74430	1.87460	K562	DKC1
RP11-252A24.2	ENSG00000214331.4	128.62190	75.51490	0.76820	2.84020	2.00810	K562	EIF4A3
RP11-252A24.2	ENSG00000214331.4	125.32450	78.53260	0.67420	2.28400	1.72570	K562	FXR1
RP11-252A24.2	ENSG00000214331.4	35.44720	67.00540	-0.91860	2.06310	1.46500	K562	G3BP2
RP11-252A24.2	ENSG00000214331.4	78.86660	141.71040	-0.84550	3.31950	2.40640	K562	KIF1C
RP11-252A24.2	ENSG00000214331.4	80.01530	135.64450	-0.76150	2.73330	1.66500	K562	MAK16
RP11-252A24.2	ENSG00000214331.4	82.31330	158.75020	-0.94760	4.29560	3.11750	K562	MBNL1
RP11-252A24.2	ENSG00000214331.4	63.40580	131.25400	-1.04970	3.96550	2.34670	K562	NONO
RP11-252A24.2	ENSG00000214331.4	72.82560	139.81460	-0.94100	3.53960	1.35310	K562	PA2G4
RP11-252A24.2	ENSG00000214331.4	58.43100	129.68870	-1.15020	4.20720	3.28270	K562	PRPF8
RP11-252A24.2	ENSG00000214331.4	53.70640	100.08280	-0.89800	2.81780	1.90410	K562	PSIP1
RP11-252A24.2	ENSG00000214331.4	136.22760	76.47160	0.83290	3.58210	2.83740	K562	PTBP1
RP11-252A24.2	ENSG00000214331.4	74.20740	129.02440	-0.79800	2.90350	2.29780	K562	RBM15
RP11-252A24.2	ENSG00000214331.4	156.87680	73.28990	1.09780	4.52680	3.42150	K562	RBM22
RP11-252A24.2	ENSG00000214331.4	65.30780	132.62160	-1.02200	3.37510	1.89970	K562	RRP9
RP11-252A24.2	ENSG00000214331.4	53.54290	102.25890	-0.93350	2.84730	1.88470	K562	TRIM56
RP11-252A24.2	ENSG00000214331.4	170.72550	268.26940	-0.65200	3.76860	2.27670	K562	TROVE2
RP11-252A24.2	ENSG00000214331.4	37.62810	67.00500	-0.83250	2.00230	1.31940	K562	U2AF2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for RP11-252A24.2 is not available on ENCORE database.

3 RBPs can affect the splicing of RP11-252A24.2 :

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	RP11-252A24.2	ENSG00000214331.4	chr16	-	74383639	74383757	74382764	74382913	74384514	74384636	0.36200	0.00204	0.03710	included	HepG2	U2AF1
SE	RP11-252A24.2	ENSG00000214331.4	chr16	-	74383639	74383757	74382764	74382913	74384514	74384636	0.68700	0.00240	0.05429	included	HepG2	HNRNPK
A3SS	RP11-252A24.2	ENSG00000214331.4	chr16	-	74372342	74372502	74372342	74372476	74372636	74372792	0.21100	0.01308	0.06657	longer	K562	AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

RP11-252A24.2

General Information

Functions

Localization

Domains (AlphaFold: RP11-252A24.2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP11-252A24.2 is not avaliable on ENCORE database.

9 proteins are bound to RP11-252A24.2 RNA:

eCLIP assay for RP11-252A24.2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP11-252A24.2 is not available on ENCORE database.

45 RBPs can affect the gene expression of RP11-252A24.2 :

The Knockdown/knockout RNA-Seq assay for RP11-252A24.2 is not available on ENCORE database.

3 RBPs can affect the splicing of RP11-252A24.2 :

The Knockdown/knockout RNA-Seq assay for RP11-252A24.2 is not avaliable on ENCORE database.