RP11-1212A22.4

General Information

Gene Name       : RP11-1212A22.4
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RP11-1212A22.4)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RP11-1212A22.4 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RP11-1212A22.4 RNA is bound by 2 proteins.  







eCLIP assay for RP11-1212A22.4 is not avaliable on ENCORE database.





2 proteins are bound to RP11-1212A22.4 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr161846891918468985-5'-UTR,intron-Distal,intron-Proximal4.613089.23582HepG2SF3B4
chr161847085218470942-intron-Distal3.038936.12642HepG2PABPN1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RP11-1212A22.4 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RP11-1212A22.4 is not available on ENCORE database.

  • 74 RBPs can affect the levels of RP11-1212A22.4.  








The Knockdown/knockout RNA-Seq assay for RP11-1212A22.4 is not available on ENCORE database.





74 RBPs can affect the gene expression of RP11-1212A22.4 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RP11-1212A22.4ENSG00000233024.3580.568101699.67150-1.5497027.6345026.15980HepG2AKAP1
RP11-1212A22.4ENSG00000233024.32442.29110991.204501.300905.965704.56390HepG2BCCIP
RP11-1212A22.4ENSG00000233024.3584.687801461.07710-1.321306.750905.55790HepG2CNOT7
RP11-1212A22.4ENSG00000233024.31207.57060611.727800.981002.996601.87920HepG2CSTF2
RP11-1212A22.4ENSG00000233024.32460.897203304.34910-0.425204.548202.91090HepG2DDX47
RP11-1212A22.4ENSG00000233024.3531.28220377.367800.493403.457002.36730HepG2DHX30
RP11-1212A22.4ENSG00000233024.32708.752801907.367600.505904.296203.48790HepG2DKC1
RP11-1212A22.4ENSG00000233024.3196.89710739.31380-1.908704.945501.48030HepG2DROSHA
RP11-1212A22.4ENSG00000233024.32186.47760963.651001.1819016.8050014.34450HepG2AGO1
RP11-1212A22.4ENSG00000233024.32766.335901485.695200.8967011.8665010.56960HepG2EIF4A3
RP11-1212A22.4ENSG00000233024.32561.460001843.171000.474703.534202.60660HepG2EIF4G1
RP11-1212A22.4ENSG00000233024.37199.191402552.810801.495609.261308.26810HepG2ETF1
RP11-1212A22.4ENSG00000233024.31080.823202030.80540-0.909909.775906.53540HepG2EXOSC5
RP11-1212A22.4ENSG00000233024.31655.87220997.339800.731304.743803.30750HepG2FASTKD2
RP11-1212A22.4ENSG00000233024.3308.217101339.44450-2.119604.097002.99420HepG2GEMIN5
RP11-1212A22.4ENSG00000233024.3446.188401352.55080-1.600003.126301.93860HepG2GRSF1
RP11-1212A22.4ENSG00000233024.3577.956801235.58780-1.096204.059302.38110HepG2HNRNPA0
RP11-1212A22.4ENSG00000233024.32535.663601662.237400.609102.443001.76670HepG2HNRNPF
RP11-1212A22.4ENSG00000233024.3917.055201702.53830-0.892602.736102.06590HepG2HNRNPL
RP11-1212A22.4ENSG00000233024.32127.856801424.405500.578902.595001.32520HepG2ILF3
RP11-1212A22.4ENSG00000233024.31268.760902114.91400-0.737205.131903.19910HepG2NOLC1
RP11-1212A22.4ENSG00000233024.33540.623701467.717701.2703021.7802017.86960HepG2NUP35
RP11-1212A22.4ENSG00000233024.31734.153401374.546800.335202.195501.54680HepG2PABPC4
RP11-1212A22.4ENSG00000233024.3765.16370432.011600.824602.207201.44250HepG2PARN
RP11-1212A22.4ENSG00000233024.32200.770001310.285000.748005.442403.33370HepG2PNPT1
RP11-1212A22.4ENSG00000233024.3649.94440389.292400.739409.510808.18790HepG2PPIL4
RP11-1212A22.4ENSG00000233024.32419.906701389.031400.800803.042002.39220HepG2QKI
RP11-1212A22.4ENSG00000233024.3539.944001145.45070-1.085008.260707.08310HepG2RAVER1
RP11-1212A22.4ENSG00000233024.32683.780701381.657900.9578012.181009.62880HepG2SART3
RP11-1212A22.4ENSG00000233024.32737.796201393.764700.973909.024106.48060HepG2SBDS
RP11-1212A22.4ENSG00000233024.32065.754601335.352600.629304.036703.34430HepG2SF3B4
RP11-1212A22.4ENSG00000233024.3430.689701393.97470-1.694505.144904.55140HepG2SRSF1
RP11-1212A22.4ENSG00000233024.32302.981101276.368900.851409.307007.19880HepG2STIP1
RP11-1212A22.4ENSG00000233024.31059.65040424.058601.321202.443701.96860HepG2TIAL1
RP11-1212A22.4ENSG00000233024.33152.928501828.499700.785909.480207.88850HepG2UBE2L3
RP11-1212A22.4ENSG00000233024.31439.57600572.831601.329408.226806.91760HepG2UCHL5
RP11-1212A22.4ENSG00000233024.31227.839601917.00810-0.642705.750904.80170HepG2UPF1
RP11-1212A22.4ENSG00000233024.32174.12420887.471401.292606.642905.04380HepG2UPF2
RP11-1212A22.4ENSG00000233024.31440.337301850.80310-0.361703.938403.24230HepG2UTP3
RP11-1212A22.4ENSG00000233024.32716.770601314.214401.0476012.7017010.42640HepG2XPO5
RP11-1212A22.4ENSG00000233024.32087.80670954.916801.128403.075602.31180HepG2XRN2
RP11-1212A22.4ENSG00000233024.32780.077001276.670501.122605.700304.78980HepG2ZC3H8
RP11-1212A22.4ENSG00000233024.31844.790901144.791500.688302.987401.63820HepG2ZRANB2
RP11-1212A22.4ENSG00000233024.3224.55790467.62670-1.058302.797002.22600K562AGGF1
RP11-1212A22.4ENSG00000233024.3235.37410486.58490-1.047702.588601.95580K562AKAP8L
RP11-1212A22.4ENSG00000233024.3147.18390444.77890-1.595502.335001.78900K562AQR
RP11-1212A22.4ENSG00000233024.3318.47020510.54120-0.680906.647905.15160K562ATP5C1
RP11-1212A22.4ENSG00000233024.3351.85980558.84560-0.667402.722101.55870K562CCDC124
RP11-1212A22.4ENSG00000233024.3130.20290317.50220-1.286007.950205.90100K562CIRBP
RP11-1212A22.4ENSG00000233024.3201.8300025.273402.997409.455007.13850K562DNAJC21
RP11-1212A22.4ENSG00000233024.3122.12670219.71940-0.847302.110901.40800K562EIF3G
RP11-1212A22.4ENSG00000233024.3243.73390100.978701.271207.665004.72100K562EIF3H
RP11-1212A22.4ENSG00000233024.3120.71930283.23480-1.2303010.670607.85610K562G3BP1
RP11-1212A22.4ENSG00000233024.3154.59790322.61080-1.061305.416402.92770K562HNRNPA0
RP11-1212A22.4ENSG00000233024.3231.60870481.51130-1.0559012.001609.66070K562HNRNPL
RP11-1212A22.4ENSG00000233024.3282.81180113.724901.314205.065803.84360K562HNRNPU
RP11-1212A22.4ENSG00000233024.3315.41000213.532300.562702.772001.97640K562HSPD1
RP11-1212A22.4ENSG00000233024.3122.46160296.36400-1.275009.440807.13170K562IGF2BP2
RP11-1212A22.4ENSG00000233024.3554.02210328.153500.755503.740402.06410K562ILF2
RP11-1212A22.4ENSG00000233024.3111.0985024.526402.179304.624502.69950K562ILF3
RP11-1212A22.4ENSG00000233024.3114.5352023.759502.269105.443203.35740K562KHDRBS1
RP11-1212A22.4ENSG00000233024.3141.30990310.69300-1.1366010.536408.62790K562MATR3
RP11-1212A22.4ENSG00000233024.3251.15600405.48020-0.691003.589802.55270K562NAA15
RP11-1212A22.4ENSG00000233024.3602.00660345.473000.801102.919601.64990K562PABPC1
RP11-1212A22.4ENSG00000233024.370.83500219.19150-1.629705.816103.24030K562PABPC4
RP11-1212A22.4ENSG00000233024.3173.34650368.28290-1.087203.877502.65000K562PABPN1
RP11-1212A22.4ENSG00000233024.3143.27070304.39550-1.087204.350002.62410K562PCBP1
RP11-1212A22.4ENSG00000233024.3290.08120183.891500.657504.065603.09070K562POLR2G
RP11-1212A22.4ENSG00000233024.3163.43060302.49880-0.888307.153906.12460K562PTBP1
RP11-1212A22.4ENSG00000233024.3224.70830482.57210-1.102709.929008.94710K562PUS1
RP11-1212A22.4ENSG00000233024.3119.50730232.08030-0.957506.676703.82450K562QKI
RP11-1212A22.4ENSG00000233024.3240.48340470.18270-0.967304.892304.12470K562RBM15
RP11-1212A22.4ENSG00000233024.3151.20930289.99280-0.939507.021205.61190K562RBM22
RP11-1212A22.4ENSG00000233024.383.70110196.68710-1.232607.763105.40140K562RBM25
RP11-1212A22.4ENSG00000233024.381.74600210.51730-1.364703.119201.31360K562RECQL
RP11-1212A22.4ENSG00000233024.3389.54360216.350400.848305.013602.89240K562RPS10
RP11-1212A22.4ENSG00000233024.373.89340163.83810-1.148805.725904.16960K562SAFB
RP11-1212A22.4ENSG00000233024.3346.47830215.647900.684005.199004.00590K562SF3B4
RP11-1212A22.4ENSG00000233024.3138.99040296.56360-1.093408.899907.64100K562SRSF1
RP11-1212A22.4ENSG00000233024.3439.76010206.646401.089504.147102.44810K562SSRP1
RP11-1212A22.4ENSG00000233024.3183.72490284.15590-0.629103.445902.19980K562TRA2A
RP11-1212A22.4ENSG00000233024.3894.45290530.556100.753403.085701.59910K562UBE2L3
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RP11-1212A22.4 is not available on ENCORE database.






No RBPs affect the alternative splcing events of RP11-1212A22.4 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for RP11-1212A22.4 is not avaliable on ENCORE database.