POMZP3

General Information

Gene Name       : POMZP3
Gene ID             : ENSG00000146707.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: POMZP3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878POMZP3ENSG00000146707.143.053.923.48ENCSR000AEF
HepG2POMZP3ENSG00000146707.143.952.733.34ENCSR985KAT
K562POMZP3ENSG00000146707.146.335.525.92ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for POMZP3 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on POMZP3 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for POMZP3 is not avaliable on ENCORE database.






NO known proteins are bound to POMZP3 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for POMZP3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for POMZP3 is not available on ENCORE database.

  • 55 RBPs can affect the levels of POMZP3.  








The Knockdown/knockout RNA-Seq assay for POMZP3 is not available on ENCORE database.





55 RBPs can affect the gene expression of POMZP3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
POMZP3ENSG00000146707.1092.5757041.228601.166902.718701.78460HepG2ABCF1
POMZP3ENSG00000146707.1034.7104069.63230-1.004402.547101.88400HepG2AUH
POMZP3ENSG00000146707.1071.1746026.738801.412303.853603.06600HepG2DDX21
POMZP3ENSG00000146707.1094.8058032.245301.555805.471704.57400HepG2EIF4A3
POMZP3ENSG00000146707.1093.6694041.631601.169802.892002.10440HepG2FIP1L1
POMZP3ENSG00000146707.1050.1287020.767901.271202.583601.50370HepG2FUS
POMZP3ENSG00000146707.1060.6891030.178201.007802.154801.56500HepG2G3BP1
POMZP3ENSG00000146707.1053.6644019.557801.456103.209602.23610HepG2GEMIN5
POMZP3ENSG00000146707.1074.8770031.402501.253503.971703.25650HepG2HNRNPU
POMZP3ENSG00000146707.1086.7811032.540401.415104.345003.52590HepG2MAGOH
POMZP3ENSG00000146707.1067.6483032.719901.047802.765502.14970HepG2PUS1
POMZP3ENSG00000146707.10173.9102071.220401.287906.996205.98410HepG2RPLP0
POMZP3ENSG00000146707.10143.2505038.262001.9045010.156608.80060HepG2SF3A3
POMZP3ENSG00000146707.1092.2115039.974801.205803.247602.74600HepG2SRSF1
POMZP3ENSG00000146707.10128.2504065.524400.968804.150203.54930HepG2SSB
POMZP3ENSG00000146707.1072.6072030.504001.251003.568103.01540HepG2TIAL1
POMZP3ENSG00000146707.1085.4216035.614801.262003.474602.77550HepG2U2AF1
POMZP3ENSG00000146707.1086.2410041.382801.059203.416702.68270HepG2ZC3H8
POMZP3ENSG00000146707.10510.45780212.911101.2614013.2815012.13810K562AGGF1
POMZP3ENSG00000146707.10377.59040233.995700.690205.433603.94820K562AKAP8
POMZP3ENSG00000146707.10410.61280221.553200.890008.330007.13500K562AKAP8L
POMZP3ENSG00000146707.10812.28370147.351602.4626023.8377022.30200K562AQR
POMZP3ENSG00000146707.10446.41900232.480500.941209.771907.92620K562ATP5C1
POMZP3ENSG00000146707.10365.39360254.409600.522202.623601.48770K562CCDC124
POMZP3ENSG00000146707.10206.82410145.520600.507102.316601.71120K562DDX47
POMZP3ENSG00000146707.10169.6423077.415001.131704.851803.11620K562EEF2
POMZP3ENSG00000146707.10228.77650138.824600.720603.788602.83190K562EIF4A3
POMZP3ENSG00000146707.10231.05840104.295601.147507.545506.07730K562FIP1L1
POMZP3ENSG00000146707.10176.20510102.242100.785203.625101.94920K562G3BP1
POMZP3ENSG00000146707.10257.59440121.055301.089306.755305.56660K562GRSF1
POMZP3ENSG00000146707.10465.15230186.380501.319407.708405.29880K562HNRNPA2B1
POMZP3ENSG00000146707.10185.1124095.381100.956504.549603.80310K562HNRNPC
POMZP3ENSG00000146707.10469.29690235.090000.997203.853902.85750K562KIF1C
POMZP3ENSG00000146707.10422.48940225.066000.908503.245002.05530K562MAK16
POMZP3ENSG00000146707.10294.03560196.633100.580402.994501.81700K562MSI2
POMZP3ENSG00000146707.10207.67930118.831100.805304.665903.63740K562MTPAP
POMZP3ENSG00000146707.10454.65530184.602601.3003011.540709.24730K562NAA15
POMZP3ENSG00000146707.10202.52300132.027400.617103.098102.31210K562NSUN2
POMZP3ENSG00000146707.10420.26490163.093901.365507.775205.82240K562PABPN1
POMZP3ENSG00000146707.10153.2882093.146000.718602.729401.32030K562PHF6
POMZP3ENSG00000146707.10206.68220132.458400.641802.879802.06210K562POLR2G
POMZP3ENSG00000146707.10365.07130193.963200.912303.733301.95260K562PPP1R8
POMZP3ENSG00000146707.10126.2041072.765400.794302.227501.55050K562PRPF8
POMZP3ENSG00000146707.10741.99050219.652001.7561013.4497012.29850K562PUS1
POMZP3ENSG00000146707.10592.78710214.074101.4693016.8961015.41370K562RBM15
POMZP3ENSG00000146707.10386.46710200.658000.945503.717401.86400K562RBM39
POMZP3ENSG00000146707.10131.78810234.37500-0.830603.660202.48880K562RPS3
POMZP3ENSG00000146707.10298.64560149.190301.001203.465302.08010K562SF1
POMZP3ENSG00000146707.10218.83320138.839900.656302.561101.62690K562SF3B1
POMZP3ENSG00000146707.10188.82150104.148600.858302.245801.47710K562SF3B4
POMZP3ENSG00000146707.10413.49870181.933101.184405.861403.64180K562SFPQ
POMZP3ENSG00000146707.10343.02120171.278801.001904.196702.57670K562SNRNP200
POMZP3ENSG00000146707.10175.57870101.127500.795803.671102.42870K562SRSF5
POMZP3ENSG00000146707.10146.1268079.585600.876503.613602.12030K562SSB
POMZP3ENSG00000146707.10391.11500204.915300.932503.880702.07570K562SUPT6H
POMZP3ENSG00000146707.10123.3302070.401400.808702.372801.43580K562SUPV3L1
POMZP3ENSG00000146707.10139.8494082.258500.765502.582801.68210K562TIAL1
POMZP3ENSG00000146707.10195.9727097.073901.013405.166003.57650K562U2AF1
POMZP3ENSG00000146707.10274.62160139.991800.972007.804606.67220K562UPF1
POMZP3ENSG00000146707.10483.72460222.773001.118506.971904.66470K562UTP18
POMZP3ENSG00000146707.10235.24940119.785900.973606.496605.12050K562WDR3
POMZP3ENSG00000146707.10365.51560201.610100.858303.288701.51270K562YTHDC2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for POMZP3 is not available on ENCORE database.





6 RBPs can affect the splicing of POMZP3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEPOMZP3ENSG00000146707.10chr7-7624781376247932762474997624761776254838762550000.386000.000010.00029includedK562AQR
SEPOMZP3ENSG00000146707.10chr7-7624781376247932762474997624761776254838762550200.213000.000000.00001includedK562DROSHA
SEPOMZP3ENSG00000146707.10chr7-7624781376247932762474997624761776254838762550000.180000.000690.05029includedK562HNRNPUL1
SEPOMZP3ENSG00000146707.10chr7-7624781376247932762474997624761776254838762550000.118000.000330.06081includedK562NPM1
SEPOMZP3ENSG00000146707.10chr7-7624781376247932762474997624761776254838762550000.348000.001100.02097includedK562HNRNPC
A3SSPOMZP3ENSG00000146707.10chr7-7624749976247932762474997624761776254838762550200.225000.000050.01881longerK562DROSHA
A3SSPOMZP3ENSG00000146707.10chr7-7625483876255073762548387625500076255316762555320.080000.001660.01089longerK562AQR
A3SSPOMZP3ENSG00000146707.10chr7-7624749976247932762474997624761776254838762550000.344000.000020.00023longerK562AQR
RIPOMZP3ENSG00000146707.10chr7-762474997624793276247499762476177624781376247932-0.363000.000240.02658excludedK562LARP4

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for POMZP3 is not avaliable on ENCORE database.