PHF2

General Information

Gene Name : PHF2
Gene ID : ENSG00000197724.10
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PHF2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PHF2	ENSG00000197724.10	3.81	5.47	4.64	ENCSR000AEF
HepG2	PHF2	ENSG00000197724.10	8.22	7.57	7.90	ENCSR985KAT
K562	PHF2	ENSG00000197724.10	7.10	6.55	6.82	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PHF2 is not avaliable on ENCORE database.

Proteins bound to RNA

PHF2 RNA is bound by 37 proteins.

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eCLIP assay for PHF2 is not avaliable on ENCORE database.

37 proteins are bound to PHF2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr9	96412115	96412226	+	intron-Distal	7.20078	106.22510	K562	AGGF1
chr9	96412340	96412460	+	intron-Distal	8.40901	80.54402	K562	AGGF1
chr9	96411905	96411992	+	intron-Distal	6.57790	65.56170	K562	AGGF1
chr9	96412675	96412772	+	intron-Distal	6.56014	61.78261	K562	AGGF1
chr9	96412582	96412645	+	intron-Distal	8.02041	58.36472	K562	AGGF1
chr9	96412534	96412582	+	intron-Distal	7.91317	55.53681	K562	AGGF1
chr9	96412491	96412534	+	intron-Distal	6.70154	48.78222	K562	AGGF1
chr9	96441425	96441517	+	3'-UTR	5.38301	41.63041	K562	PUM2
chr9	96435263	96435390	+	intron-Distal	8.00759	38.07400	K562	DHX30
chr9	96426076	96426141	+	intron-Distal	4.59581	36.87641	K562	AGGF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 143 entries

eCLIP assay for PHF2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for PHF2 is not available on ENCORE database.
39 RBPs can affect the levels of PHF2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for PHF2 is not available on ENCORE database.

39 RBPs can affect the gene expression of PHF2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PHF2	ENSG00000197724.6	484.34180	774.91340	-0.67800	8.98830	8.24520	HepG2	SRSF1
PHF2	ENSG00000197724.6	1192.16830	696.23930	0.77580	8.88800	7.75600	HepG2	U2AF1
PHF2	ENSG00000197724.6	549.24550	853.39270	-0.63580	7.88600	7.11560	HepG2	RBM22
PHF2	ENSG00000197724.6	968.95490	708.57320	0.45140	6.64030	5.80450	HepG2	PUM1
PHF2	ENSG00000197724.6	384.28220	562.08010	-0.54860	5.82480	4.90580	HepG2	ZC3H8
PHF2	ENSG00000197724.6	1621.94680	1195.23720	0.44030	5.80900	4.46980	K562	EIF4G2
PHF2	ENSG00000197724.6	277.20930	444.71010	-0.68190	5.46730	3.94170	HepG2	FASTKD2
PHF2	ENSG00000197724.6	387.98490	566.80060	-0.54680	4.74520	3.89760	K562	PTBP1
PHF2	ENSG00000197724.6	556.75830	754.30950	-0.43810	4.30440	3.58350	HepG2	UTP3
PHF2	ENSG00000197724.6	1174.30880	881.20850	0.41420	4.74050	3.56300	K562	HNRNPU
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 39 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for PHF2 is not available on ENCORE database.

6 RBPs can affect the splicing of PHF2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	PHF2	ENSG00000197724.6	chr9	+	96421792	96421882	96420426	96420518	96422473	96422842	-0.32100	0.00000	0.00002	excluded	K562	PUS1
A3SS	PHF2	ENSG00000197724.6	chr9	+	96425773	96425917	96425798	96425917	96425188	96425308	0.18000	0.00001	0.00012	longer	K562	AQR
SE	PHF2	ENSG00000197724.6	chr9	+	96421792	96421882	96420426	96420518	96422473	96422842	-0.23200	0.00005	0.00234	excluded	K562	RBM15
SE	PHF2	ENSG00000197724.6	chr9	+	96421792	96421882	96420426	96420518	96422473	96422842	-0.13100	0.00112	0.03715	excluded	K562	UTP18
SE	PHF2	ENSG00000197724.6	chr9	+	96421792	96421882	96420426	96420518	96422473	96422842	-0.12500	0.00189	0.04535	excluded	K562	AGGF1
SE	PHF2	ENSG00000197724.6	chr9	+	96421792	96421882	96420426	96420518	96422473	96422842	-0.13500	0.00250	0.06317	excluded	K562	AKAP8L

Showing 1 to 6 of 6 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PHF2

General Information

Functions

Localization

Domains (AlphaFold: PHF2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PHF2 is not avaliable on ENCORE database.

37 proteins are bound to PHF2 RNA:

eCLIP assay for PHF2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PHF2 is not available on ENCORE database.

39 RBPs can affect the gene expression of PHF2 :

The Knockdown/knockout RNA-Seq assay for PHF2 is not available on ENCORE database.

6 RBPs can affect the splicing of PHF2 :

The Knockdown/knockout RNA-Seq assay for PHF2 is not avaliable on ENCORE database.