EMC10

General Information

Gene Name       : EMC10
Gene ID             : ENSG00000161671.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: EMC10)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878EMC10ENSG00000161671.162.2012.427.31ENCSR000AEF
HepG2EMC10ENSG00000161671.160.030.020.03ENCSR985KAT
K562EMC10ENSG00000161671.1619.728.7914.25ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for EMC10 is not avaliable on ENCORE database.



Proteins bound to RNA
  • EMC10 RNA is bound by 11 proteins.  







eCLIP assay for EMC10 is not avaliable on ENCORE database.





11 proteins are bound to EMC10 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr195098549050985543+3'-UTR,CDS,intron-Proximal5.187479.15277K562DHX30
chr195098549150985545+3'-UTR,CDS,intron-Proximal4.204254.22598K562CSTF2T
chr195098549250985555+3'-UTR,CDS,intron-Proximal3.367873.57593K562GTF2F1
chr195098645050986551+3'-UTR5.161999.14966K562YBX3
chr195098652150986596+3'-UTR,polyA_signal4.137213.08314K562TARDBP
chr195098549650985551+3'-UTR,CDS,intron-Proximal5.605584.99229K562DDX52
chr195098549750985579+3'-UTR,CDS,intron-Proximal3.357196.40768K562GEMIN5
chr195098623650986302+3'-UTR5.8731215.74283K562PUM2
chr195098601550986123+3'-UTR4.460414.85237K562UPF1
chr195098232150982420+5'-UTR,CDS,intron-Proximal4.955115.69951K562AQR
chr195098128950981445+intron-Distal,intron-Proximal6.4148414.44342K562QKI
chr195098476650984864+intron-Distal3.961543.80512K562CSTF2T
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for EMC10 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for EMC10 is not available on ENCORE database.

  • 55 RBPs can affect the levels of EMC10.  








The Knockdown/knockout RNA-Seq assay for EMC10 is not available on ENCORE database.





55 RBPs can affect the gene expression of EMC10 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
EMC10ENSG00000161671.12531.89470360.686000.560305.058304.32970K562AGGF1
EMC10ENSG00000161671.12608.78460375.307400.697803.631702.88010K562AKAP8L
EMC10ENSG00000161671.12835.27230519.429600.685206.837104.78510K562APOBEC3C
EMC10ENSG00000161671.12357.09660242.951100.555503.446201.94420K562BCCIP
EMC10ENSG00000161671.12619.18400301.546601.037908.608106.46280K562CCAR1
EMC10ENSG00000161671.12454.09560723.80560-0.672607.039105.50490K562CELF1
EMC10ENSG00000161671.12167.54790344.30570-1.039103.712301.49460K562DAZAP1
EMC10ENSG00000161671.12314.41180184.358200.770005.446903.91370K562DDX3X
EMC10ENSG00000161671.12481.98070337.619900.513502.795001.46050K562DHX30
EMC10ENSG00000161671.121021.56580494.060201.0479022.4978020.75980K562EIF2S2
EMC10ENSG00000161671.12628.04830306.709401.033905.698004.21820K562EIF3A
EMC10ENSG00000161671.12416.37040231.872600.844405.807804.23160K562EIF3D
EMC10ENSG00000161671.12242.84350114.469301.085008.142406.78460K562EIF3G
EMC10ENSG00000161671.12254.89100173.431700.555403.067901.83350K562EIF4B
EMC10ENSG00000161671.12935.85570588.667100.668709.197907.52350K562EIF4G2
EMC10ENSG00000161671.12849.10260488.885200.796309.177307.53790K562FIP1L1
EMC10ENSG00000161671.1248.91960101.20770-1.048803.414201.90660K562FUS
EMC10ENSG00000161671.12354.50040200.290100.823604.909604.13600K562FXR1
EMC10ENSG00000161671.1234.7923083.57300-1.264303.750402.89850K562G3BP2
EMC10ENSG00000161671.12353.95270494.70740-0.483003.052702.21990K562GPKOW
EMC10ENSG00000161671.12835.16680658.368600.343102.382401.67940K562GRSF1
EMC10ENSG00000161671.12376.54050275.783900.449202.369801.32690K562HNRNPF
EMC10ENSG00000161671.12635.51120402.094100.660303.238702.22540K562HNRNPM
EMC10ENSG00000161671.12834.94870662.854000.332902.012901.32910K562HSPD1
EMC10ENSG00000161671.12229.50540422.39660-0.880105.543504.16420K562KRR1
EMC10ENSG00000161671.12582.33240446.200200.384102.664401.77640K562MBNL1
EMC10ENSG00000161671.12357.10370482.88620-0.435302.499601.67100K562METAP2
EMC10ENSG00000161671.12321.15070213.438100.589302.925801.58120K562NONO
EMC10ENSG00000161671.12363.34680561.85180-0.628807.368706.23300K562NSUN2
EMC10ENSG00000161671.12497.40560145.443101.7739029.2289027.16010K562PTBP1
EMC10ENSG00000161671.12287.24350642.28080-1.1609013.0278011.24220K562PUF60
EMC10ENSG00000161671.12578.34920372.221200.635705.120604.41050K562PUS1
EMC10ENSG00000161671.1231.7652079.73660-1.327803.231601.67870K562RAVER1
EMC10ENSG00000161671.12240.49530139.419400.786504.656403.53220K562RBM22
EMC10ENSG00000161671.12476.18160252.647900.914309.146907.33410K562RCC2
EMC10ENSG00000161671.12318.13660214.666100.567502.433401.66890K562RPS19
EMC10ENSG00000161671.12216.16900103.014801.069205.029703.62590K562RPS3
EMC10ENSG00000161671.12651.64620320.759501.022504.354702.98410K562SAFB
EMC10ENSG00000161671.12392.90900554.46510-0.496902.850802.02610K562SF3A3
EMC10ENSG00000161671.12260.92460470.45400-0.850406.357004.84880K562SF3B1
EMC10ENSG00000161671.12168.48420325.02030-0.947904.155801.68150K562SMNDC1
EMC10ENSG00000161671.12476.76490239.500200.993206.525104.75620K562SRFBP1
EMC10ENSG00000161671.12433.01260568.06700-0.391703.197202.19790K562SRPK2
EMC10ENSG00000161671.12424.89710142.591601.575106.621005.53590K562SRSF1
EMC10ENSG00000161671.12160.0881099.427000.687102.337501.38280K562SRSF4
EMC10ENSG00000161671.12214.65940134.689000.672303.311802.14390K562SRSF5
EMC10ENSG00000161671.12355.77710641.47930-0.850408.646006.11230K562SSRP1
EMC10ENSG00000161671.12411.52140586.73560-0.511703.327301.92520K562STAU1
EMC10ENSG00000161671.12634.18630361.011100.812809.589808.05570K562SYNCRIP
EMC10ENSG00000161671.1224.8905082.03600-1.720705.183602.92740K562TAF15
EMC10ENSG00000161671.12266.93530139.191800.939306.478905.14810K562TIA1
EMC10ENSG00000161671.12203.59460136.633800.575302.365901.37220K562TRA2A
EMC10ENSG00000161671.12471.02850595.74660-0.338902.543001.85280K562UPF1
EMC10ENSG00000161671.12381.63360530.12370-0.474104.385303.33670K562WDR43
EMC10ENSG00000161671.12203.67400375.57840-0.882903.505901.64120K562YTHDC2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for EMC10 is not available on ENCORE database.






No RBPs affect the alternative splcing events of EMC10 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for EMC10 is not avaliable on ENCORE database.