DPH6

General Information

Gene Name       : DPH6
Gene ID             : ENSG00000134146.11
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: DPH6)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878DPH6ENSG00000134146.118.116.187.14ENCSR000AEF
HepG2DPH6ENSG00000134146.117.097.317.20ENCSR985KAT
K562DPH6ENSG00000134146.117.636.797.21ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for DPH6 is not avaliable on ENCORE database.



Proteins bound to RNA
  • DPH6 RNA is bound by 5 proteins.  







eCLIP assay for DPH6 is not avaliable on ENCORE database.





5 proteins are bound to DPH6 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr153566398935664123-3'-UTR,intron-Distal3.540863.89405HepG2PTBP1
chr153574694735746992-CDS,intron-Distal,intron-Proximal5.130117.39496HepG2BCLAF1
chr153566436435664442-CDS,intron-Distal4.8765910.31463HepG2U2AF2
chr153574296535743005-CDS,intron-Distal,intron-Proximal3.791074.09885HepG2BCLAF1
chr153562480335624858-intron-Distal4.363553.50357HepG2QKI
chr153566101535661087-intron-Distal4.507939.10156HepG2QKI
chr153566102535661140-intron-Distal5.161368.13723HepG2PTBP1
chr153580361835803687-intron-Distal3.896103.41738HepG2PTBP1
chr153566101735661089-intron-Distal4.439643.42734K562PTBP1
chr153560939835609472-intron-Distal4.635474.07628HepG2PTBP1
chr153582262735822690-intron-Distal4.504284.40618K562PTBP1
chr153570023435700357-intron-Distal4.455775.04993HepG2QKI
chr153565784435657977-intron-Distal3.915594.24478HepG2CSTF2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for DPH6 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for DPH6 is not available on ENCORE database.

  • 47 RBPs can affect the levels of DPH6.  








The Knockdown/knockout RNA-Seq assay for DPH6 is not available on ENCORE database.





47 RBPs can affect the gene expression of DPH6 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
DPH6ENSG00000134146.751.6005094.18920-0.868202.126001.33340HepG2BCLAF1
DPH6ENSG00000134146.770.81760120.06200-0.761602.354301.76300HepG2EIF4A3
DPH6ENSG00000134146.7150.07820215.65560-0.523002.036301.50330HepG2ETF1
DPH6ENSG00000134146.7232.07920115.510101.006504.147503.22050HepG2FIP1L1
DPH6ENSG00000134146.729.93060119.95010-2.002704.548503.74030HepG2GPKOW
DPH6ENSG00000134146.744.0091082.86370-0.912902.210501.62810HepG2HNRNPA1
DPH6ENSG00000134146.794.99310139.95900-0.559101.965401.34700HepG2IGF2BP1
DPH6ENSG00000134146.728.3676081.76950-1.527302.935502.02070HepG2PABPC1
DPH6ENSG00000134146.781.04860128.71840-0.667402.075101.59220HepG2NELFE
DPH6ENSG00000134146.7193.62920121.888400.667602.380001.46020HepG2SRSF3
DPH6ENSG00000134146.794.18540139.64190-0.568202.087601.47360HepG2SRSF7
DPH6ENSG00000134146.7110.62700176.79250-0.676402.925002.40140HepG2SSB
DPH6ENSG00000134146.785.06020149.73900-0.815902.865901.97590HepG2TUFM
DPH6ENSG00000134146.756.14860104.43650-0.895302.314001.64560HepG2XRN2
DPH6ENSG00000134146.7195.46000282.20340-0.529902.988402.40200K562AGGF1
DPH6ENSG00000134146.7181.01860293.63700-0.697904.287703.47000K562AKAP8L
DPH6ENSG00000134146.7162.53900476.61400-1.5520017.9271016.60080K562AQR
DPH6ENSG00000134146.7169.58960320.82700-0.919706.876205.63170K562CPSF6
DPH6ENSG00000134146.7274.61440456.38830-0.732907.627206.61810K562DDX47
DPH6ENSG00000134146.7150.76670236.99050-0.652502.997802.04720K562EFTUD2
DPH6ENSG00000134146.7128.06500253.70890-0.986305.846704.26490K562EIF3D
DPH6ENSG00000134146.7155.38270326.42690-1.070908.400606.86830K562FMR1
DPH6ENSG00000134146.7176.19310276.67310-0.651003.291302.28710K562FTO
DPH6ENSG00000134146.7195.63520306.31380-0.646803.708802.79530K562GPKOW
DPH6ENSG00000134146.7212.20720359.36720-0.760002.658901.47290K562HNRNPA2B1
DPH6ENSG00000134146.7136.67460282.68650-1.048507.402506.47200K562HNRNPC
DPH6ENSG00000134146.7300.02220412.44390-0.459102.780901.72310K562HNRNPL
DPH6ENSG00000134146.7162.56870261.54610-0.686002.773901.83930K562KRR1
DPH6ENSG00000134146.7180.64470273.80160-0.600003.061001.58770K562LARP7
DPH6ENSG00000134146.7178.62920298.99520-0.743204.518303.38120K562METAP2
DPH6ENSG00000134146.7127.72110314.52590-1.300205.585004.04180K562PABPN1
DPH6ENSG00000134146.7179.56000298.54210-0.733504.388103.14910K562PCBP2
DPH6ENSG00000134146.7182.80210374.11450-1.033204.142602.22210K562PPP1R8
DPH6ENSG00000134146.7141.24250325.94230-1.2064011.8920010.56860K562PTBP1
DPH6ENSG00000134146.7158.17680291.26820-0.880805.235904.51950K562PUS1
DPH6ENSG00000134146.7208.91010283.74650-0.441702.233801.69160K562RBM15
DPH6ENSG00000134146.7175.84790312.63920-0.830206.004704.70630K562RBM22
DPH6ENSG00000134146.7138.01450210.68310-0.610302.631301.34030K562RBM25
DPH6ENSG00000134146.7209.27970386.97560-0.886803.077601.43250K562RBM39
DPH6ENSG00000134146.7144.07460234.88610-0.705102.937402.09490K562RPS19
DPH6ENSG00000134146.7135.96950287.74640-1.081503.644002.19970K562SF1
DPH6ENSG00000134146.7189.68510291.30470-0.618902.848201.85980K562SF3B1
DPH6ENSG00000134146.7180.86400350.94730-0.956303.313601.83810K562SFPQ
DPH6ENSG00000134146.7177.69860330.29670-0.894303.128901.79160K562SNRNP200
DPH6ENSG00000134146.7185.96550319.51160-0.780805.456604.46970K562SRSF1
DPH6ENSG00000134146.7232.39270311.95450-0.424802.073001.37190K562TIA1
DPH6ENSG00000134146.7516.82060687.19480-0.411102.694201.31290K562UBE2L3
DPH6ENSG00000134146.7153.27180295.25400-0.945904.254702.52720K562UTP18
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for DPH6 is not available on ENCORE database.





1 RBPs can affect the splicing of DPH6 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEDPH6ENSG00000134146.7chr15-3578227835782398357469473574702135830474358306680.053000.004490.04250includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for DPH6 is not avaliable on ENCORE database.