CORO7-PAM16

Cell Line	Gene Name	Ensembl ID	Rep2 TPM	Average TPM	Experiment ID
Gm12878	CORO7-PAM16	ENSG00000103426.12	0.01	0.01	ENCSR000AEF
HepG2	CORO7-PAM16	ENSG00000103426.12	0.00	0.00	ENCSR985KAT
K562	CORO7-PAM16	ENSG00000103426.12	0.00	0.00	ENCSR000AEO

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for CORO7-PAM16 is not avaliable on ENCORE database.

Proteins bound to RNA

CORO7-PAM16 RNA is bound by 37 proteins.

eCLIP assay for CORO7-PAM16 is not avaliable on ENCORE database.

37 proteins are bound to CORO7-PAM16 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr16	4393207	4393294	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.34233	9.90371	K562	PABPC4
chr16	4410449	4410547	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.89786	3.46058	HepG2	PABPN1
chr16	4393284	4393362	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.28345	6.96160	K562	SF3B4
chr16	4393207	4393267	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.71014	4.52980	K562	DDX6
chr16	4390920	4390973	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.66349	7.42660	K562	PABPC4
chr16	4393207	4393274	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.54706	15.80841	K562	DDX3X
chr16	4391540	4391625	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.17206	6.75320	K562	AQR
chr16	4391467	4391507	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.81989	6.24350	K562	PABPC4
chr16	4393271	4393293	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.85652	4.82666	HepG2	DDX3X
chr16	4393290	4393335	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.54201	8.03431	HepG2	SF3A3
chr16	4393205	4393273	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.82953	5.77937	HepG2	LARP4
chr16	4410495	4410565	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.49743	4.63311	K562	AQR
chr16	4391458	4391514	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.02949	7.63469	K562	DDX3X
chr16	4390920	4390975	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.81348	8.24027	K562	DDX55
chr16	4411067	4411154	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.80809	4.21913	K562	EFTUD2
chr16	4411434	4411504	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.63602	7.12981	K562	DDX24
chr16	4391490	4391606	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.32468	6.96160	K562	SF3B4
chr16	4393274	4393293	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.93073	9.06301	K562	DDX3X
chr16	4393206	4393271	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.58495	6.83552	HepG2	DDX3X
chr16	4408404	4408474	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.57828	6.53290	K562	DDX24
chr16	4390915	4390965	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.75864	5.52342	HepG2	PPIG
chr16	4390375	4390407	-	3'-UTR,CDS,intron-Distal	3.24677	5.16029	K562	DDX55
chr16	4390920	4390971	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.78842	4.91352	HepG2	LARP4
chr16	4393217	4393271	-	3'-UTR,CDS,intron-Distal	3.89345	6.81514	K562	DDX55
chr16	4411162	4411222	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.46896	6.36664	K562	DDX24
chr16	4391373	4391451	-	3'-UTR,CDS,intron-Distal	4.12782	4.50960	HepG2	GRWD1
chr16	4390984	4391028	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.87098	3.05889	HepG2	SF3B4
chr16	4411460	4411522	-	3'-UTR,CDS,intron-Distal,intron-Proximal	6.18168	14.18173	K562	SF3B4
chr16	4393156	4393246	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.22020	14.36606	HepG2	PRPF8
chr16	4411939	4412002	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.48339	3.91614	K562	BUD13
chr16	4411935	4411987	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.77856	8.13013	K562	AQR
chr16	4455563	4455619	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	4.02251	12.45480	K562	SF3B4
chr16	4414849	4414923	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.92189	4.60670	K562	FXR2
chr16	4412677	4412756	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.80045	6.79537	K562	AQR
chr16	4455483	4455569	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	4.69275	12.16203	HepG2	PPIG
chr16	4458180	4458227	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.11491	4.63145	K562	BUD13
chr16	4411925	4412029	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.83777	10.09256	HepG2	PRPF8
chr16	4463362	4463414	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.03316	3.28461	K562	BUD13
chr16	4438544	4438603	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.02489	6.36347	HepG2	PPIG
chr16	4411919	4412031	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.60682	5.66421	K562	PRPF8
chr16	4457599	4457686	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.23158	6.47139	HepG2	PPIG
chr16	4438545	4438592	-	5'-UTR,CDS,intron-Distal,intron-Proximal	6.00103	8.32974	K562	DDX24
chr16	4458181	4458248	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.60886	8.46997	HepG2	PPIG
chr16	4433977	4434028	-	intron-Distal	4.44620	3.87357	K562	EWSR1
chr16	4393861	4393959	-	intron-Distal,intron-Proximal	4.80786	5.44904	K562	TARDBP
chr16	4401099	4401193	-	intron-Distal,intron-Proximal	4.19254	13.20924	HepG2	EFTUD2
chr16	4394565	4394634	-	intron-Distal	5.13714	38.37728	HepG2	HNRNPK
chr16	4393960	4394073	-	CDS,intron-Distal	3.12064	4.77325	K562	NONO
chr16	4401028	4401091	-	5'-UTR,intron-Distal,intron-Proximal	3.82719	9.56233	HepG2	EFTUD2
chr16	4401112	4401183	-	intron-Distal,intron-Proximal	3.12131	6.59076	K562	EFTUD2
chr16	4394522	4394554	-	intron-Distal	5.60740	8.44886	HepG2	PCBP2
chr16	4394784	4394850	-	intron-Distal	6.30745	22.78670	K562	HNRNPK
chr16	4435401	4435473	-	intron-Distal	4.26220	4.66266	K562	TARDBP
chr16	4394579	4394621	-	intron-Distal	4.61022	11.75932	HepG2	PCBP2
chr16	4432206	4432258	-	intron-Distal	3.56876	4.81215	K562	EWSR1
chr16	4393126	4393207	-	intron-Distal,intron-Proximal	5.61227	10.04245	K562	AQR
chr16	4409716	4409796	-	intron-Distal,intron-Proximal	5.49735	7.23906	K562	EFTUD2
chr16	4395251	4395288	-	intron-Distal,intron-Proximal	5.51705	11.52296	HepG2	HNRNPM
chr16	4398189	4398310	-	intron-Distal	3.11468	3.75965	HepG2	DROSHA
chr16	4394792	4394828	-	intron-Distal	3.05133	3.71976	K562	HNRNPL
chr16	4393894	4393931	-	intron-Distal	4.34151	7.31982	HepG2	DDX59
chr16	4401110	4401214	-	intron-Distal,intron-Proximal	3.31658	6.53486	HepG2	CSTF2T
chr16	4437892	4437964	-	intron-Distal,intron-Proximal	3.88788	5.32871	HepG2	CSTF2T
chr16	4437271	4437370	-	intron-Distal	3.78694	3.60521	K562	FUS
chr16	4398438	4398565	-	intron-Distal	3.09381	3.93430	K562	FUS
chr16	4401267	4401302	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.51105	5.06399	K562	DDX3X
chr16	4431702	4431778	-	intron-Distal	4.55049	4.42197	K562	EWSR1
chr16	4398279	4398423	-	intron-Distal	3.85280	3.94652	K562	FUS
chr16	4394787	4394843	-	intron-Distal	5.44869	18.16319	HepG2	DDX59
chr16	4434175	4434264	-	intron-Distal	4.12765	3.80314	K562	CSTF2T
chr16	4404629	4404781	-	3'-UTR,intron-Distal	5.18247	14.42401	K562	UPF1
chr16	4393855	4393945	-	intron-Distal,intron-Proximal	3.52683	5.02933	K562	CSTF2T
chr16	4394513	4394556	-	intron-Distal	4.36631	4.19401	K562	HNRNPK
chr16	4401050	4401116	-	5'-UTR,intron-Distal,intron-Proximal	3.41445	3.97690	HepG2	XRN2
chr16	4412569	4412601	-	intron-Distal,intron-Proximal	5.02731	5.69951	K562	AQR
chr16	4400899	4400958	-	5'-UTR,CDS,intron-Distal	3.87613	3.53896	K562	NONO
chr16	4401109	4401210	-	intron-Distal,intron-Proximal	4.06438	6.71940	K562	PRPF8
chr16	4436121	4436182	-	intron-Distal	3.23434	3.79911	HepG2	CSTF2T
chr16	4401027	4401115	-	5'-UTR,intron-Distal,intron-Proximal	3.66073	4.94042	K562	NONO
chr16	4401044	4401117	-	5'-UTR,intron-Distal,intron-Proximal	4.03890	3.84644	HepG2	NCBP2
chr16	4437029	4437095	-	intron-Distal	3.42082	3.41462	K562	EWSR1
chr16	4431998	4432053	-	intron-Distal	4.08157	3.70058	K562	CSTF2T
chr16	4407923	4407944	-	intron-Distal,intron-Proximal	5.06086	5.17615	K562	AQR
chr16	4404839	4404973	-	3'-UTR,intron-Distal,intron-Proximal	3.91385	8.24727	K562	UPF1
chr16	4394787	4394848	-	intron-Distal	5.40020	19.91536	HepG2	PCBP2
chr16	4394447	4394467	-	intron-Distal	6.04588	24.33515	HepG2	DDX59
chr16	4394434	4394513	-	intron-Distal	5.28796	61.07930	HepG2	HNRNPK
chr16	4393297	4393395	-	intron-Distal,intron-Proximal	4.85663	7.61488	HepG2	EFTUD2
chr16	4451532	4451689	-	intron-Distal	4.44804	5.63677	K562	PTBP1
chr16	4393900	4393960	-	intron-Distal	4.23916	4.08332	K562	NONO
chr16	4401271	4401298	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.38913	4.29172	K562	YBX3
chr16	4427939	4428009	-	intron-Distal	3.84093	3.30664	K562	NONO
chr16	4436106	4436171	-	intron-Distal	4.71515	5.95343	K562	EWSR1
chr16	4397651	4397712	-	intron-Distal	4.76335	6.40665	K562	NONO
chr16	4409753	4409893	-	intron-Distal	4.28889	9.68274	K562	EIF4G2
chr16	4401156	4401190	-	intron-Distal,intron-Proximal	3.40921	3.32762	HepG2	DDX59
chr16	4400791	4400873	-	intron-Distal	3.32558	3.36616	K562	NONO
chr16	4409727	4409839	-	intron-Distal,intron-Proximal	3.18779	3.20331	K562	CSTF2T
chr16	4401000	4401200	-	5'-UTR,intron-Distal,intron-Proximal	3.96391	13.32993	HepG2	FKBP4
chr16	4394115	4394161	-	5'-UTR,intron-Distal,intron-Proximal	5.89095	12.56912	HepG2	DDX59
chr16	4435527	4435599	-	intron-Distal	3.13200	5.38993	K562	NONO
chr16	4401133	4401194	-	intron-Distal,intron-Proximal	4.13617	3.69238	K562	GTF2F1
chr16	4397548	4397612	-	intron-Distal	3.16720	5.38993	K562	NONO
chr16	4401230	4401267	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.16862	13.97687	K562	DDX3X
chr16	4409669	4409839	-	intron-Distal,intron-Proximal	3.79721	8.25843	K562	PRPF8
chr16	4398239	4398340	-	intron-Distal	3.73697	5.10104	K562	NONO
chr16	4409739	4409837	-	intron-Distal	4.63617	4.06667	K562	GTF2F1
chr16	4394784	4394871	-	intron-Distal	5.45974	39.44993	HepG2	HNRNPK
chr16	4401056	4401211	-	intron-Distal,intron-Proximal	3.06865	4.19099	HepG2	PRPF4
chr16	4436889	4436935	-	intron-Distal	3.21713	3.46580	HepG2	CSTF2T
chr16	4401205	4401269	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.06056	6.35651	HepG2	NCBP2
chr16	4431709	4431776	-	intron-Distal	4.35070	4.61649	HepG2	CSTF2T
chr16	4401020	4401102	-	5'-UTR,intron-Distal,intron-Proximal	3.95612	5.84589	K562	EFTUD2
chr16	4431997	4432054	-	intron-Distal	4.40779	4.16830	K562	EWSR1
chr16	4435663	4435730	-	intron-Distal	3.16841	4.12745	K562	EWSR1
chr16	4401132	4401234	-	CDS,intron-Distal,intron-Proximal	4.69351	5.68078	HepG2	AQR
chr16	4414258	4414277	-	intron-Distal,intron-Proximal	5.45511	8.83608	K562	AQR
chr16	4437431	4437543	-	intron-Distal	3.97029	3.90256	HepG2	PRPF4
chr16	4400765	4400829	-	intron-Distal	3.86239	3.37414	K562	CSTF2T
chr16	4401015	4401110	-	5'-UTR,intron-Distal,intron-Proximal	3.56439	5.12571	HepG2	CSTF2T
chr16	4394442	4394491	-	intron-Distal	4.72586	28.47745	HepG2	PCBP2
chr16	4397485	4397548	-	intron-Distal	3.38689	4.48585	K562	NONO
chr16	4412601	4412613	-	intron-Distal,intron-Proximal	3.37958	3.94787	K562	AQR
chr16	4394467	4394493	-	intron-Distal	6.10537	26.92145	HepG2	DDX59
chr16	4394513	4394565	-	intron-Distal	4.81455	28.32335	HepG2	HNRNPK
chr16	4437473	4437545	-	intron-Distal	4.65835	6.32269	K562	CSTF2T
chr16	4435668	4435725	-	intron-Distal	3.19745	4.24473	HepG2	CSTF2T
chr16	4431816	4431874	-	intron-Distal	4.36324	4.70436	K562	EWSR1
chr16	4414226	4414258	-	intron-Distal,intron-Proximal	5.59031	9.23760	K562	AQR
chr16	4394392	4394436	-	intron-Distal	5.07896	9.13275	K562	HNRNPK
chr16	4400958	4401027	-	5'-UTR,intron-Distal	4.22815	4.23759	K562	NONO
chr16	4401120	4401208	-	intron-Distal,intron-Proximal	3.39420	3.01707	K562	SLTM
chr16	4437496	4437554	-	intron-Distal	4.50629	4.84986	K562	GTF2F1
chr16	4393738	4393795	-	5'-UTR,intron-Distal,intron-Proximal	4.29329	4.39969	K562	TARDBP
chr16	4435412	4435457	-	intron-Distal	3.28301	3.93602	K562	EWSR1
chr16	4427946	4428001	-	intron-Distal	4.22731	3.28464	K562	EWSR1
chr16	4394405	4394419	-	intron-Distal	5.35280	5.96444	HepG2	PCBP2
chr16	4394583	4394617	-	intron-Distal	4.70535	6.52680	K562	HNRNPK
chr16	4394436	4394497	-	intron-Distal	5.01480	24.97531	K562	HNRNPK
chr16	4427160	4427247	-	intron-Distal	4.07931	3.40229	HepG2	CSTF2T
chr16	4437665	4437726	-	intron-Distal,intron-Proximal	4.40633	5.01722	K562	CSTF2T
chr16	4394391	4394434	-	intron-Distal	5.63486	23.26693	HepG2	HNRNPK
chr16	4394524	4394554	-	intron-Distal	5.12569	5.41835	HepG2	DDX59
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for CORO7-PAM16 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for CORO7-PAM16 is not available on ENCORE database.
19 RBPs can affect the levels of CORO7-PAM16.

The Knockdown/knockout RNA-Seq assay for CORO7-PAM16 is not available on ENCORE database.

19 RBPs can affect the gene expression of CORO7-PAM16 :

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
CORO7-PAM16	ENSG00000103426.8	7.85660	0.00000	99999.99990	1.96830	1.43190	HepG2	MATR3
CORO7-PAM16	ENSG00000103426.8	0.00000	7.87850	-99999.99999	2.47120	1.83470	HepG2	SF3A3
CORO7-PAM16	ENSG00000103426.8	22.44700	0.00000	99999.99990	2.05700	1.60510	HepG2	SRFBP1
CORO7-PAM16	ENSG00000103426.8	0.00000	6.98710	-99999.99999	2.04450	1.42850	HepG2	UPF1
CORO7-PAM16	ENSG00000103426.8	0.00000	7.68440	-99999.99999	2.42660	1.90480	HepG2	ZNF622
CORO7-PAM16	ENSG00000103426.8	0.00000	14.09980	-99999.99999	4.62400	2.62970	K562	AKAP1
CORO7-PAM16	ENSG00000103426.8	10.07620	0.00000	99999.99990	2.86570	1.88860	K562	BCLAF1
CORO7-PAM16	ENSG00000103426.8	0.00000	17.83040	-99999.99999	5.27650	3.60860	K562	CCDC124
CORO7-PAM16	ENSG00000103426.8	0.00000	14.49050	-99999.99999	4.63500	2.80170	K562	DDX6
CORO7-PAM16	ENSG00000103426.8	0.00000	16.70360	-99999.99999	4.86160	3.64840	K562	DKC1
CORO7-PAM16	ENSG00000103426.8	0.00000	14.93270	-99999.99999	4.72350	3.65150	K562	EIF4A3
CORO7-PAM16	ENSG00000103426.8	0.00000	14.08820	-99999.99999	4.64540	2.25680	K562	FUBP3
CORO7-PAM16	ENSG00000103426.8	11.97880	0.00000	99999.99990	3.92220	2.91420	K562	MAGOH
CORO7-PAM16	ENSG00000103426.8	0.00000	15.77550	-99999.99999	4.07180	2.68920	K562	MAK16
CORO7-PAM16	ENSG00000103426.8	0.00000	18.45850	-99999.99999	5.41730	4.05800	K562	MBNL1
CORO7-PAM16	ENSG00000103426.8	0.00000	12.93840	-99999.99999	2.84490	1.94790	K562	NAA15
CORO7-PAM16	ENSG00000103426.8	0.00000	13.25140	-99999.99999	3.78870	2.11720	K562	PNPT1
CORO7-PAM16	ENSG00000103426.8	14.51280	0.00000	99999.99990	3.99410	2.75730	K562	SUPV3L1
CORO7-PAM16	ENSG00000103426.8	10.68700	0.00000	99999.99990	3.18700	2.00230	K562	TRA2A
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

CORO7-PAM16

General Information

Functions

Localization

Domains (AlphaFold: CORO7-PAM16)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for CORO7-PAM16 is not avaliable on ENCORE database.

37 proteins are bound to CORO7-PAM16 RNA:

eCLIP assay for CORO7-PAM16 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for CORO7-PAM16 is not available on ENCORE database.

19 RBPs can affect the gene expression of CORO7-PAM16 :

The Knockdown/knockout RNA-Seq assay for CORO7-PAM16 is not available on ENCORE database.

No RBPs affect the alternative splcing events of CORO7-PAM16 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for CORO7-PAM16 is not avaliable on ENCORE database.