BRSK1

General Information

Gene Name       : BRSK1
Gene ID             : ENSG00000160469.16
Essential Gene : No

Functions

Localization

Domains (AlphaFold: BRSK1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878BRSK1ENSG00000160469.160.000.020.01ENCSR000AEF
HepG2BRSK1ENSG00000160469.160.420.150.28ENCSR985KAT
K562BRSK1ENSG00000160469.163.252.923.08ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for BRSK1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • BRSK1 RNA is bound by 6 proteins.  







eCLIP assay for BRSK1 is not avaliable on ENCORE database.





6 proteins are bound to BRSK1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr195579569055795739+5'-UTR,intron-Distal3.531735.14149K562DDX24
chr195579545955795523+intron-Distal,intron-Proximal4.452833.19125K562GTF2F1
chr195579546055795513+intron-Distal,intron-Proximal4.081813.36385K562UCHL5
chr195579545255795512+intron-Distal,intron-Proximal4.470425.64813K562DDX24
chr195579545155795524+intron-Distal,intron-Proximal3.990443.53160K562RBFOX2
chr195579545455795511+intron-Distal,intron-Proximal3.306424.77857K562AKAP8L
chr195579546155795510+intron-Distal,intron-Proximal3.255563.31745K562ZNF622
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for BRSK1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for BRSK1 is not available on ENCORE database.

  • 51 RBPs can affect the levels of BRSK1.  








The Knockdown/knockout RNA-Seq assay for BRSK1 is not available on ENCORE database.





51 RBPs can affect the gene expression of BRSK1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
BRSK1ENSG00000160469.1275.9237026.683901.508504.953804.18550HepG2ACO1
BRSK1ENSG00000160469.1277.3766018.624502.054605.674104.94410HepG2AKAP1
BRSK1ENSG00000160469.1285.8806014.322702.583907.153505.97930HepG2DDX55
BRSK1ENSG00000160469.12237.3692015.330803.9525036.1295034.28060HepG2DDX6
BRSK1ENSG00000160469.1255.0513019.915001.466804.013003.25690HepG2DNAJC2
BRSK1ENSG00000160469.12174.9270040.350102.1160010.316108.95940HepG2FIP1L1
BRSK1ENSG00000160469.1259.3165015.236701.960805.240104.33820HepG2G3BP1
BRSK1ENSG00000160469.1281.0373025.468501.669806.701105.26560HepG2HDGF
BRSK1ENSG00000160469.1249.3750021.379301.207502.337001.71030HepG2HNRNPL
BRSK1ENSG00000160469.126.5678028.56220-2.120602.764302.13500HepG2HNRNPLL
BRSK1ENSG00000160469.1245.1975022.417701.011501.928401.41330HepG2HNRNPU
BRSK1ENSG00000160469.1290.1001033.208501.439904.437202.88130HepG2HSPD1
BRSK1ENSG00000160469.1284.9117033.853101.326604.207202.68280HepG2KHDRBS1
BRSK1ENSG00000160469.1273.6724028.294501.380502.575801.55840HepG2METAP2
BRSK1ENSG00000160469.1262.7791023.266101.432003.652302.77540HepG2NOL12
BRSK1ENSG00000160469.1246.9975022.191601.082502.090601.34630HepG2PARN
BRSK1ENSG00000160469.12124.8694040.309001.631105.384604.23640HepG2RBM15
BRSK1ENSG00000160469.12141.5667033.396202.0836012.7683011.81810HepG2RBM22
BRSK1ENSG00000160469.128.1199028.27370-1.799902.255901.61620HepG2SF3B1
BRSK1ENSG00000160469.1266.9574020.398801.714702.822701.35690HepG2SFPQ
BRSK1ENSG00000160469.1255.7991023.284001.260802.955702.29370HepG2SMN1
BRSK1ENSG00000160469.124.7604032.75600-2.782604.896304.25110HepG2SSB
BRSK1ENSG00000160469.124.6248022.53570-2.284702.747402.15210HepG2UTP3
BRSK1ENSG00000160469.1211.3482029.00420-1.353801.891001.32130HepG2ZC3H8
BRSK1ENSG00000160469.1261.32710159.01100-1.374505.813805.01690K562AQR
BRSK1ENSG00000160469.12349.44010468.00670-0.421502.751201.84080K562ATP5C1
BRSK1ENSG00000160469.12156.7685085.484100.874803.768002.50000K562CCAR1
BRSK1ENSG00000160469.12314.82850512.24890-0.702306.428804.60430K562CCDC124
BRSK1ENSG00000160469.12120.0709075.548800.668301.977801.30610K562CPSF6
BRSK1ENSG00000160469.12351.97700172.950801.0250010.746809.55930K562DDX47
BRSK1ENSG00000160469.12231.00890131.690500.810704.319002.56950K562DDX6
BRSK1ENSG00000160469.12187.6503099.532700.914704.995304.07000K562EIF2S2
BRSK1ENSG00000160469.12216.2305086.953301.314206.103004.57110K562EIF3A
BRSK1ENSG00000160469.1282.30730135.70130-0.721302.665701.86080K562EIF4A3
BRSK1ENSG00000160469.12114.4061065.156600.812102.611101.72640K562FTO
BRSK1ENSG00000160469.1226.44830141.12330-2.4157016.1941014.83830K562FXR1
BRSK1ENSG00000160469.1213.3696048.85920-1.869704.196903.28490K562G3BP2
BRSK1ENSG00000160469.12185.6097072.129501.363508.050406.69210K562GPKOW
BRSK1ENSG00000160469.12167.24410113.334400.561301.899501.39360K562HNRNPC
BRSK1ENSG00000160469.12385.73560103.273701.9010022.4261020.35250K562HSPD1
BRSK1ENSG00000160469.12237.1887084.819801.483508.268106.12870K562IGF2BP2
BRSK1ENSG00000160469.12147.6947086.316700.774803.381202.02920K562IGF2BP3
BRSK1ENSG00000160469.12349.30160473.34080-0.438402.090901.38450K562KIF1C
BRSK1ENSG00000160469.12169.73940101.618900.740103.054302.09820K562PSIP1
BRSK1ENSG00000160469.1246.8614086.70380-0.887701.985601.40630K562PTBP1
BRSK1ENSG00000160469.12112.02890229.75770-1.036202.525901.74660K562PUF60
BRSK1ENSG00000160469.12152.53070442.31540-1.5360015.7696014.51280K562PUS1
BRSK1ENSG00000160469.12299.86550430.99430-0.523403.509902.85510K562RBM15
BRSK1ENSG00000160469.12230.4212055.854302.0444014.5212012.62340K562RPS19
BRSK1ENSG00000160469.12157.7069080.233500.974902.461801.47830K562SRSF5
BRSK1ENSG00000160469.1232.3734095.88750-1.566506.350605.09920K562SYNCRIP
BRSK1ENSG00000160469.12140.7609082.986500.762202.934402.08900K562TIA1
BRSK1ENSG00000160469.12179.7278081.372801.143106.171704.38440K562TRA2A
BRSK1ENSG00000160469.12167.5900056.190501.576408.359106.51590K562UCHL5
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for BRSK1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of BRSK1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for BRSK1 is not avaliable on ENCORE database.