ARL16

General Information

Gene Name       : ARL16
Gene ID             : ENSG00000214087.8
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ARL16)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ARL16ENSG00000214087.810.0318.6714.35ENCSR000AEF
HepG2ARL16ENSG00000214087.819.7613.3516.55ENCSR985KAT
K562ARL16ENSG00000214087.823.4217.2220.32ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ARL16 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ARL16 RNA is bound by 8 proteins.  







eCLIP assay for ARL16 is not avaliable on ENCORE database.





8 proteins are bound to ARL16 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr177964825479648330-3'-UTR,intron-Distal,intron-Proximal4.666846.51828K562YBX3
chr177964882979648903-3'-UTR,CDS,intron-Distal3.434015.11155K562YBX3
chr177964876879648829-3'-UTR,CDS,intron-Distal,intron-Proximal4.383835.86108K562YBX3
chr177965053079650662-5'-UTR,CDS,intron-Distal,intron-Proximal3.9334211.99655HepG2AQR
chr177965051079650673-5'-UTR,CDS,intron-Distal,intron-Proximal4.0040522.98657HepG2PRPF8
chr177965055979650618-5'-UTR,CDS,intron-Distal,intron-Proximal3.8767212.10572HepG2EFTUD2
chr177965056579650629-5'-UTR,CDS,intron-Distal,intron-Proximal4.487405.07098K562DDX3X
chr177965051779650634-5'-UTR,CDS,intron-Distal,intron-Proximal4.527315.63763K562AQR
chr177965061179650626-5'-UTR,CDS,intron-Distal,intron-Proximal3.068473.06595HepG2PPIG
chr177965062579650688-5'-UTR,intron-Distal,intron-Proximal3.759739.76099HepG2EFTUD2
chr177965056279650686-5'-UTR,CDS,intron-Distal,intron-Proximal3.2941113.10836HepG2BUD13
chr177965071879650778-CDS,intron-Distal,intron-Proximal4.622257.55366K562DDX3X
chr177965046879650556-intron-Distal,intron-Proximal5.4059119.46454HepG2EFTUD2
chr177965040479650446-intron-Distal5.530598.08771HepG2EFTUD2
chr177965047779650542-intron-Distal,intron-Proximal4.013645.05259HepG2RBM22
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ARL16 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ARL16 is not available on ENCORE database.

  • 44 RBPs can affect the levels of ARL16.  








The Knockdown/knockout RNA-Seq assay for ARL16 is not available on ENCORE database.





44 RBPs can affect the gene expression of ARL16 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ARL16ENSG00000214087.4309.12450194.269100.670002.355501.49380HepG2BCCIP
ARL16ENSG00000214087.4298.82300157.992200.919306.153405.30160HepG2BOP1
ARL16ENSG00000214087.4303.71220159.379800.930104.612103.62080HepG2CNOT7
ARL16ENSG00000214087.4325.09020232.808200.481602.810602.12820HepG2DKC1
ARL16ENSG00000214087.4178.2600097.463600.870901.965501.39860HepG2DNAJC2
ARL16ENSG00000214087.4493.90250329.153300.585403.486202.77070HepG2EIF4A3
ARL16ENSG00000214087.4512.32520392.639700.383802.530601.95150HepG2ETF1
ARL16ENSG00000214087.4195.9565099.272400.981004.915204.08710HepG2HNRNPA1
ARL16ENSG00000214087.4252.05110110.422701.190607.740806.62900HepG2HNRNPC
ARL16ENSG00000214087.4194.60730109.692600.827004.799204.01870HepG2HNRNPU
ARL16ENSG00000214087.4171.70610112.047300.615703.026402.26250HepG2ILF2
ARL16ENSG00000214087.4346.54620242.242500.516502.313001.55800HepG2LARP4
ARL16ENSG00000214087.4492.08970332.255400.566503.482402.74450HepG2MAGOH
ARL16ENSG00000214087.4188.20870108.576200.793504.176103.16020HepG2PARN
ARL16ENSG00000214087.4162.6193097.837000.732903.400702.59070HepG2PPIL4
ARL16ENSG00000214087.4397.37000296.258200.423502.243801.69860HepG2PUF60
ARL16ENSG00000214087.4407.33350314.487700.373102.438101.87450HepG2PUM1
ARL16ENSG00000214087.4535.77500328.174600.707107.112206.37200HepG2RBM22
ARL16ENSG00000214087.4232.06400321.70440-0.471202.340401.71450HepG2RBM25
ARL16ENSG00000214087.4327.07740211.128700.631402.973001.94350HepG2RBM27
ARL16ENSG00000214087.4468.80810293.597700.675103.794503.01490HepG2RPLP0
ARL16ENSG00000214087.4234.10160125.704000.897005.146604.33840HepG2RPS19
ARL16ENSG00000214087.4339.23560194.708800.800904.816503.77860HepG2RPS2
ARL16ENSG00000214087.4278.34360160.075600.798003.975603.01630HepG2RPS3A
ARL16ENSG00000214087.4213.2648097.685801.126306.337605.42250HepG2SAFB2
ARL16ENSG00000214087.4226.68530113.917600.992607.258206.29270HepG2SMN1
ARL16ENSG00000214087.4286.94950172.769600.731802.911402.10760HepG2SNRNP70
ARL16ENSG00000214087.4478.33440370.662000.367802.638402.14460HepG2SRFBP1
ARL16ENSG00000214087.4339.88600267.791000.343802.016601.41190HepG2SRSF7
ARL16ENSG00000214087.4487.90760321.823800.600205.870105.17630HepG2SSB
ARL16ENSG00000214087.4305.83200190.131300.685602.431501.79200HepG2SUPV3L1
ARL16ENSG00000214087.4204.45230319.73200-0.645103.435602.82150HepG2TAF15
ARL16ENSG00000214087.4223.78360152.968600.548801.973501.34860HepG2TARDBP
ARL16ENSG00000214087.4285.67550106.584901.422306.560605.85110HepG2TIAL1
ARL16ENSG00000214087.4200.85250107.539800.901205.791605.02950HepG2TRIM56
ARL16ENSG00000214087.4383.84640289.426100.407202.083601.33460HepG2TUFM
ARL16ENSG00000214087.4371.32750174.006301.093505.703304.22230HepG2UPF2
ARL16ENSG00000214087.4326.99690187.164500.804903.640402.81780HepG2XRN2
ARL16ENSG00000214087.4560.92970343.586500.707008.268307.22110K562DDX47
ARL16ENSG00000214087.4271.41350154.354000.814105.904904.75520K562EIF3G
ARL16ENSG00000214087.4327.03700208.573700.648804.502203.75600K562FXR1
ARL16ENSG00000214087.484.28270134.70230-0.676501.897701.32450K562G3BP2
ARL16ENSG00000214087.4288.31590193.997100.571501.846601.34760K562HNRNPC
ARL16ENSG00000214087.4328.85260223.538900.556802.737201.81270K562HNRNPM
ARL16ENSG00000214087.4284.07330211.300200.426902.053201.32440K562MAGOH
ARL16ENSG00000214087.4275.96760196.781800.487802.376401.60250K562RBM22
ARL16ENSG00000214087.4394.90490195.589801.013607.049705.73090K562RPS19
ARL16ENSG00000214087.4276.23590201.280600.456602.146201.51480K562SRSF1
ARL16ENSG00000214087.4283.01900203.674400.474502.217601.58020K562TARDBP
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ARL16 is not available on ENCORE database.





25 RBPs can affect the splicing of ARL16 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEARL16ENSG00000214087.4chr17-7964952079649705796490637964917979650042796501560.366000.000000.00000includedHepG2G3BP1
SEARL16ENSG00000214087.4chr17-796490637965015679648251796489097965056579650624-0.078000.000010.00021excludedK562AQR
SEARL16ENSG00000214087.4chr17-7964947279649705796490637964917979650042796501480.147000.000060.00881includedHepG2DDX3X
SEARL16ENSG00000214087.4chr17-7964952079649705796490637964917979650042796501480.251000.000000.00002includedHepG2NCBP2
SEARL16ENSG00000214087.4chr17-7964952079649705796490637964917979650042796501480.202000.000070.00596includedHepG2PTBP1
SEARL16ENSG00000214087.4chr17-7964952079649705796490637964917979650042796501560.357000.000000.00000includedHepG2MATR3
SEARL16ENSG00000214087.4chr17-7964952079649705796490637964917979650042796501560.151000.000450.01336includedHepG2SRSF1
SEARL16ENSG00000214087.4chr17-7964952079649705796490637964917979650042796501560.141000.001370.08177includedHepG2IGF2BP3
SEARL16ENSG00000214087.4chr17-796495207964970579649063796491797965004279650148-0.318000.001120.09709excludedHepG2RBFOX2
SEARL16ENSG00000214087.4chr17-7964952079649705796490637964917979650042796501480.162000.000270.01632includedHepG2SF3B4
SEARL16ENSG00000214087.4chr17-7964952079649705796490637964917979650042796501480.189000.002590.07732includedK562HNRNPU
SEARL16ENSG00000214087.4chr17-7964952079649705796490637964917979650042796501560.180000.000150.07194includedK562AARS
SEARL16ENSG00000214087.4chr17-7964952079649705796490637964917979650042796501560.146000.000500.06370includedHepG2KHSRP
SEARL16ENSG00000214087.4chr17-7964952079649705796490637964917979650042796501560.239000.000010.00051includedK562HNRNPC
A3SSARL16ENSG00000214087.4chr17-7964906379649705796490637964917979650042796501480.201000.000040.01393longerHepG2PTBP1
A3SSARL16ENSG00000214087.4chr17-7964906379649705796490637964917979650042796501560.134000.000760.06285longerHepG2HNRNPK
A3SSARL16ENSG00000214087.4chr17-7964906379649705796490637964917979650042796501560.404000.000000.00000longerHepG2MATR3
A3SSARL16ENSG00000214087.4chr17-7964906379649705796490637964917979650042796501560.216000.000000.00392longerHepG2IGF2BP3
A3SSARL16ENSG00000214087.4chr17-7964906379649705796490637964917979650042796501560.178000.000210.02466longerHepG2SRSF1
A3SSARL16ENSG00000214087.4chr17-7964906379649705796490637964917979650042796501480.316000.000000.00000longerHepG2NCBP2
A3SSARL16ENSG00000214087.4chr17-7964906379649705796490637964917979650042796501560.178000.000050.03599longerHepG2KHSRP
A3SSARL16ENSG00000214087.4chr17-7964906379649705796490637964917979650042796501480.203000.005230.03008longerK562AQR
A3SSARL16ENSG00000214087.4chr17-7964882479648984796488247964890979649063796491790.143000.000000.00000longerK562AQR
A3SSARL16ENSG00000214087.4chr17-7964906379649705796490637964917979650042796501560.442000.000000.00000longerHepG2G3BP1
A3SSARL16ENSG00000214087.4chr17-7964906379649705796490637964917979650042796501560.170000.000660.07467longerK562HNRNPC
A3SSARL16ENSG00000214087.4chr17-7964906379649705796490637964917979650042796501480.236000.000000.00013longerHepG2SF3B4
RIARL16ENSG00000214087.4chr17-7964906379650156796490637964917979650042796501560.117000.000790.03086includedHepG2TIA1
RIARL16ENSG00000214087.4chr17-796490637965015679649063796497057965004279650156-0.274000.000830.08428excludedK562MATR3
RIARL16ENSG00000214087.4chr17-7964906379650156796490637964917979650042796501560.211000.000000.00001includedHepG2IGF2BP3
RIARL16ENSG00000214087.4chr17-7964906379650156796490637964917979650042796501560.280000.000000.00000includedHepG2MATR3
RIARL16ENSG00000214087.4chr17-7964906379650624796490637965015679650565796506240.097000.001550.02228includedHepG2PCBP1
RIARL16ENSG00000214087.4chr17-7964906379650156796490637964917979650042796501560.130000.001350.03243includedHepG2SRSF1
RIARL16ENSG00000214087.4chr17-7964906379650156796490637964917979650042796501560.082000.006020.05829includedHepG2QKI
RIARL16ENSG00000214087.4chr17-7964906379650624796490637965015679650565796506240.203000.000010.00030includedHepG2TAF15
RIARL16ENSG00000214087.4chr17-7964906379650156796490637964970579650042796501560.505000.011240.08457includedHepG2TAF15
RIARL16ENSG00000214087.4chr17-796490637965062479649063796501567965056579650624-0.186000.000620.00775excludedHepG2U2AF1
RIARL16ENSG00000214087.4chr17-7964906379650156796490637964917979650042796501560.313000.000000.00000includedHepG2G3BP1
RIARL16ENSG00000214087.4chr17-7964906379650156796490637964917979650042796501560.126000.000240.00788includedHepG2KHSRP
RIARL16ENSG00000214087.4chr17-7964906379650156796490637964917979650042796501560.237000.000000.00000includedHepG2NCBP2
RIARL16ENSG00000214087.4chr17-7964906379650624796490637965015679650565796506240.170000.000000.00002includedHepG2SF3B4
RIARL16ENSG00000214087.4chr17-7964906379650156796490637964917979650042796501560.224000.000000.00000includedHepG2SF3B4
RIARL16ENSG00000214087.4chr17-7964906379650156796490637964917979650042796501560.160000.002740.04368includedHepG2FUBP3
RIARL16ENSG00000214087.4chr17-7964906379650156796490637964970579650042796501560.293000.000490.00708includedHepG2RBM22
RIARL16ENSG00000214087.4chr17-7964906379650624796490637965015679650565796506240.084000.006990.08308includedHepG2SRSF9
RIARL16ENSG00000214087.4chr17-7964906379650156796490637964917979650042796501560.133000.000040.00091includedHepG2HNRNPK
RIARL16ENSG00000214087.4chr17-7964906379650624796490637965015679650565796506240.134000.011550.08953includedK562EFTUD2
RIARL16ENSG00000214087.4chr17-7964906379650156796490637964917979650042796501560.229000.001490.01700includedK562EFTUD2
RIARL16ENSG00000214087.4chr17-7964906379650624796490637965015679650565796506240.151000.000000.00000includedK562AQR
RIARL16ENSG00000214087.4chr17-7964906379650156796490637964970579650042796501560.181000.002400.01486includedK562AQR
RIARL16ENSG00000214087.4chr17-796490637965015679649063796497057965004279650156-0.255000.002250.06530excludedK562TARDBP
RIARL16ENSG00000214087.4chr17-796490637964970579649063796491797964952079649705-0.495000.006290.08563excludedK562PTBP1
MXEARL16ENSG00000214087.4chr17-7964952079649705796500427965015679649063796491797965062279650698-0.120000.004380.032152includedK562AQR
MXEARL16ENSG00000214087.4chr17-7964952079649705796500427965015679649063796491797965062279650698-0.171000.000930.062132includedHepG2G3BP1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ARL16 is not avaliable on ENCORE database.