RBP | Antibody Info | Primary-HepG2 | Secondary-HepG2 | Primary-K562 | Secondary-K562 | Primary-UBERON | Primary-Hela |
---|
Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
---|---|---|---|---|---|---|---|---|
chr1 | 55505236 | 55505331 | + | 5'-UTR | 4.08901 | 400.00000 | HepG2 | DDX3X |
chr1 | 55505482 | 55505621 | + | 5'-UTR,CDS | 4.19447 | 63.26155 | HepG2 | RPS3 |
chr1 | 55529645 | 55529763 | + | 3'-UTR | 5.82080 | 61.74737 | HepG2 | UPF1 |
chr1 | 55529493 | 55529566 | + | 3'-UTR | 5.86162 | 60.87538 | HepG2 | UPF1 |
chr1 | 55529374 | 55529427 | + | 3'-UTR | 5.62767 | 53.27809 | HepG2 | UPF1 |
chr1 | 55512222 | 55512320 | + | CDS,intron-Distal,intron-Proximal | 5.81282 | 53.12836 | K562 | SND1 |
chr1 | 55505621 | 55505694 | + | CDS | 4.82223 | 52.33409 | HepG2 | RPS3 |
chr1 | 55529782 | 55529856 | + | 3'-UTR | 7.38380 | 46.75927 | HepG2 | UPF1 |
chr1 | 55529588 | 55529645 | + | 3'-UTR | 5.25756 | 46.09771 | HepG2 | UPF1 |
chr1 | 55517957 | 55518063 | + | 3'-UTR,CDS | 4.45318 | 44.24052 | HepG2 | RPS3 |
Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) * | -log(pval) ** | -log(padj) ** | Cell Line | Affected by RBP | Bound by RBP |
---|---|---|---|---|---|---|---|---|---|
PCSK9 | ENSG00000169174.9 | 11408.48170 | 3154.10770 | 1.85470 | 262.96310 | 258.58400 | HepG2 | SLBP | |
PCSK9 | ENSG00000169174.9 | 1383.27240 | 11674.44660 | -3.07720 | 220.00230 | 216.95480 | HepG2 | SRSF9 | |
PCSK9 | ENSG00000169174.9 | 1897.64880 | 14350.27880 | -2.91880 | 199.59780 | 197.28310 | HepG2 | SRSF1 | |
PCSK9 | ENSG00000169174.9 | 2354.83800 | 14695.98790 | -2.64170 | 167.64250 | 165.16280 | HepG2 | NELFE | |
PCSK9 | ENSG00000169174.9 | 2546.47280 | 13204.76220 | -2.37450 | 136.23500 | 133.90650 | HepG2 | PTBP1 | |
PCSK9 | ENSG00000169174.9 | 1229.54710 | 3491.85330 | -1.50590 | 119.01490 | 116.45640 | HepG2 | PUM1 | |
PCSK9 | ENSG00000169174.9 | 826.09530 | 5016.27660 | -2.60220 | 114.30850 | 110.81760 | HepG2 | RBM15 | |
PCSK9 | ENSG00000169174.9 | 1250.28650 | 15148.23250 | -3.59880 | 109.01690 | 106.54700 | HepG2 | AKAP1 | |
PCSK9 | ENSG00000169174.9 | 4661.02350 | 1210.64710 | 1.94480 | 106.83250 | 102.95090 | HepG2 | PPIL4 | |
PCSK9 | ENSG00000169174.9 | 4357.09990 | 1330.70770 | 1.71110 | 99.67260 | 96.93350 | HepG2 | TRIM56 | |
Gene Name | Gene ID | KDMean | CNMean | log2(fold change) | -log(pval) | -log(padj) | Cell Line | Affected by RBP | Bound by RBP |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
Event Type | Gene Name | Gene ID | chr | Strand | ExonStart | ExonEnd | 2ndExonStart | 2ndExonEnd | upstreamES | upstreamEE | downstreamES | downstreamEE | dPSI | p-value | FDR | is_included | Cell Line | Affected by RBP | Bound by RBP |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SE | PCSK9 | ENSG00000169174.9 | chr1 | + | 55512195 | 55512319 | 55505430 | 55505717 | 55517950 | 55518084 | -0.13500 | 0.00000 | 0.00054 | excluded | K562 | HNRNPL | |||
MXE | PCSK9 | ENSG00000169174.9 | chr1 | + | 55509515 | 55509707 | 55512195 | 55512319 | 55505220 | 55505717 | 55517950 | 55518084 | 0.13300 | 0.00000 | 0.00000 | 1included | HepG2 | NOLC1 | |
MXE | PCSK9 | ENSG00000169174.9 | chr1 | + | 55509515 | 55509707 | 55512195 | 55512319 | 55505220 | 55505717 | 55517950 | 55518084 | 0.13500 | 0.00000 | 0.00000 | 1included | HepG2 | NOL12 | |
MXE | PCSK9 | ENSG00000169174.9 | chr1 | + | 55509515 | 55509707 | 55512195 | 55512319 | 55505220 | 55505717 | 55517950 | 55518084 | 0.14500 | 0.00000 | 0.00000 | 1included | HepG2 | HNRNPL | |
SE | PCSK9 | ENSG00000169174.9 | chr1 | + | 55512195 | 55512319 | 55505220 | 55505717 | 55517950 | 55518084 | -0.11100 | 0.00003 | 0.02055 | excluded | K562 | XRN2 | |||
SE | PCSK9 | ENSG00000169174.9 | chr1 | + | 55509515 | 55509707 | 55505220 | 55505717 | 55517950 | 55518084 | -0.34900 | 0.00003 | 0.00629 | excluded | K562 | XRCC6 | |||
MXE | PCSK9 | ENSG00000169174.9 | chr1 | + | 55509515 | 55509707 | 55512195 | 55512319 | 55505220 | 55505717 | 55517950 | 55518084 | 0.14400 | 0.00010 | 0.00575 | 1included | HepG2 | NCBP2 | |
SE | PCSK9 | ENSG00000169174.9 | chr1 | + | 55509515 | 55509707 | 55505430 | 55505717 | 55517950 | 55518084 | -0.11500 | 0.00018 | 0.00608 | excluded | HepG2 | SRSF1 | |||
MXE | PCSK9 | ENSG00000169174.9 | chr1 | + | 55524171 | 55524320 | 55525158 | 55525336 | 55523708 | 55523882 | 55527047 | 55527229 | -0.14800 | 0.00026 | 0.01315 | 2included | HepG2 | PTBP1 | |
MXE | PCSK9 | ENSG00000169174.9 | chr1 | + | 55509515 | 55509707 | 55512195 | 55512319 | 55505220 | 55505717 | 55517950 | 55518084 | 0.11300 | 0.00028 | 0.05920 | 1included | HepG2 | IGF2BP1 |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".