ZNF8

General Information

Gene Name       : ZNF8
Gene ID             : ENSG00000278129.1
Essential Gene : No

Functions

Localization

Domains (AlphaFold: ZNF8)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ZNF8ENSG00000278129.11.631.381.50ENCSR000AEF
HepG2ZNF8ENSG00000278129.11.051.481.27ENCSR985KAT
K562ZNF8ENSG00000278129.12.232.172.20ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
ZNF8Ribo-STAMP-293TshRNABGRSLV08-51,BGRSLV08-52BGRSLV08-1,BGRSLV08-2NotSatisfiedENCORE2
ZNF8Ribo-STAMP-293TshRNABGRSLV08-53,BGRSLV08-54BGRSLV08-1,BGRSLV08-2NotSatisfiedENCORE2


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ZNF8 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ZNF8 RNA is bound by 5 proteins.  







eCLIP assay for ZNF8 is not avaliable on ENCORE database.





5 proteins are bound to ZNF8 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr195879035958790499+5'-UTR,CDS,intron-Distal4.597455.88953K562DDX3X
chr195879035058790501+5'-UTR,CDS,intron-Distal4.082525.03370HepG2NCBP2
chr195879038058790446+5'-UTR,intron-Distal3.201333.61733HepG2XPO5
chr195879747658797559+3'-UTR,5'-UTR,CDS4.406784.98640K562YBX3
chr195879048058790564+CDS,intron-Distal,intron-Proximal4.1399514.13124HepG2PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ZNF8 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ZNF8 is not available on ENCORE database.

  • 55 RBPs can affect the levels of ZNF8.  








The Knockdown/knockout RNA-Seq assay for ZNF8 is not available on ENCORE database.





55 RBPs can affect the gene expression of ZNF8 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ZNF8ENSG00000273439.1191.9842094.653101.020204.343503.69760HepG2AKAP1
ZNF8ENSG00000083842.837.764902.330404.018301.996001.35060HepG2CNOT7
ZNF8ENSG00000273439.1151.7108090.686100.742302.584101.97760HepG2DDX3X
ZNF8ENSG00000273439.1142.9408080.563600.827102.510001.85310HepG2EIF4B
ZNF8ENSG00000083842.824.977101.353304.205903.540202.82490HepG2GPKOW
ZNF8ENSG00000273439.1144.6316083.496300.792502.799202.14070HepG2MAGOH
ZNF8ENSG00000273439.1133.8669083.972400.672701.920801.39070HepG2MATR3
ZNF8ENSG00000273439.1207.9400085.957501.274407.318606.31170HepG2NCBP2
ZNF8ENSG00000273439.1168.62060114.810600.554402.444001.87970HepG2PUM1
ZNF8ENSG00000273439.146.52250129.72680-1.479503.830603.12890HepG2PUS1
ZNF8ENSG00000273439.1143.0316079.084900.854802.368101.71250HepG2RAVER1
ZNF8ENSG00000273439.1254.80460147.176400.791704.666404.03870HepG2RBM22
ZNF8ENSG00000083842.838.153405.967002.676604.008902.15560HepG2RTF1
ZNF8ENSG00000083842.842.405901.277605.052602.869202.15040HepG2SF3B1
ZNF8ENSG00000273439.1127.1846084.023900.598001.797201.30340HepG2SF3B4
ZNF8ENSG00000273439.1276.21610166.223400.732604.796004.18810HepG2SRFBP1
ZNF8ENSG00000273439.1178.46790106.787900.740803.724603.01900HepG2SRSF5
ZNF8ENSG00000273439.1107.9423071.349400.597201.793001.33150HepG2SRSF9
ZNF8ENSG00000083842.830.984101.079204.843405.311903.47420HepG2SUGP2
ZNF8ENSG00000273439.1161.2931078.827501.032805.240804.51030HepG2TAF15
ZNF8ENSG00000273439.1216.98440117.284800.887504.414803.63000HepG2U2AF1
ZNF8ENSG00000273439.1185.94580111.850100.733202.372101.60170HepG2UBE2L3
ZNF8ENSG00000273439.1117.31580176.60990-0.590202.723902.17960HepG2ZNF622
ZNF8ENSG00000083842.823.29970140.35900-2.590703.280801.93240K562ABCF1
ZNF8ENSG00000273439.193.35080228.18900-1.289509.534608.56190K562AGGF1
ZNF8ENSG00000273439.1139.77090250.73220-0.843105.291803.82820K562AKAP8
ZNF8ENSG00000273439.1132.19630237.43780-0.844904.867703.99180K562AKAP8L
ZNF8ENSG00000273439.1142.75710249.12340-0.803305.257103.95230K562ATP5C1
ZNF8ENSG00000083842.86.3999097.73530-3.932805.098503.09520K562BUD13
ZNF8ENSG00000273439.1165.62490272.70890-0.719404.528102.98010K562CCDC124
ZNF8ENSG00000273439.1122.76350200.46420-0.707503.652601.89510K562CEBPZ
ZNF8ENSG00000273439.1141.91020230.42140-0.699303.886802.44070K562DDX21
ZNF8ENSG00000273439.1265.91820117.051601.183708.065906.66630K562EIF4A3
ZNF8ENSG00000083842.818.71020100.84920-2.430303.018502.13040K562FIP1L1
ZNF8ENSG00000083842.867.786902.473804.7761016.1800012.90090K562FUS
ZNF8ENSG00000273439.125.2704087.56520-1.792907.598805.25760K562FUS
ZNF8ENSG00000273439.1174.48640121.727700.519401.916201.39480K562FXR1
ZNF8ENSG00000273439.1156.37780271.63260-0.796604.690603.70760K562GRSF1
ZNF8ENSG00000083842.81.3374014.92770-3.480503.017902.08770K562HNRNPU
ZNF8ENSG00000083842.811.38420136.76510-3.586604.474903.46830K562HSPD1
ZNF8ENSG00000083842.80.000009.01850-99999.999993.029001.76670K562IGF2BP3
ZNF8ENSG00000273439.1136.36760251.99210-0.885905.337204.11220K562KIF1C
ZNF8ENSG00000273439.1112.47430241.20930-1.100707.298205.21920K562MAK16
ZNF8ENSG00000273439.1152.43860217.01970-0.509602.204001.47870K562MTPAP
ZNF8ENSG00000273439.1166.27390241.11360-0.536202.728601.98640K562NSUN2
ZNF8ENSG00000273439.1189.92780115.422500.718403.086002.05370K562PCBP2
ZNF8ENSG00000083842.84.71720114.44790-4.600606.365405.03260K562PPIG
ZNF8ENSG00000273439.178.67130235.49620-1.581806.114705.34610K562PUS1
ZNF8ENSG00000273439.158.41380229.43650-1.973702.778602.18400K562RBM15
ZNF8ENSG00000273439.1180.43060120.889900.577702.382101.60720K562RBM22
ZNF8ENSG00000273439.134.64940100.92130-1.542303.390402.29380K562RCC2
ZNF8ENSG00000273439.1150.3431079.696400.915602.725501.72930K562RPS3
ZNF8ENSG00000273439.153.9238095.66400-0.827102.216901.31940K562SRFBP1
ZNF8ENSG00000083842.80.000008.38050-99999.999992.532901.53650K562SRSF5
ZNF8ENSG00000083842.88.60460132.35730-3.943205.202203.29660K562SSRP1
ZNF8ENSG00000083842.80.000008.65250-99999.999992.541801.76130K562TIA1
ZNF8ENSG00000083842.87.52260118.10980-3.972804.784302.83890K562TRIP6
ZNF8ENSG00000273439.1151.56250255.65910-0.754305.045904.10650K562UPF1
ZNF8ENSG00000083842.80.5006014.30910-4.837003.953101.93280K562UPF2
ZNF8ENSG00000273439.1120.82310238.74530-0.982603.738602.16310K562UTP18
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ZNF8 is not available on ENCORE database.






No RBPs affect the alternative splcing events of ZNF8 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for ZNF8 is not avaliable on ENCORE database.