WSCD2

General Information

Gene Name       : WSCD2
Gene ID             : ENSG00000075035.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: WSCD2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878WSCD2ENSG00000075035.90.000.000.00ENCSR000AEF
HepG2WSCD2ENSG00000075035.90.000.000.00ENCSR985KAT
K562WSCD2ENSG00000075035.92.013.512.76ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for WSCD2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • WSCD2 RNA is bound by 2 proteins.  







eCLIP assay for WSCD2 is not avaliable on ENCORE database.





2 proteins are bound to WSCD2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr12108526971108527104+intron-Distal5.078538.34301K562TARDBP
chr12108526401108526466+intron-Distal4.228643.08314K562TARDBP
chr12108526806108526908+intron-Distal4.688935.18738K562TARDBP
chr12108524283108524353+intron-Distal3.479735.17677K562EIF4G2
chr12108526427108526464+intron-Distal4.337503.26170K562EIF4G2
chr12108526104108526172+intron-Distal4.459145.44904K562TARDBP
chr12108526237108526318+intron-Distal4.617455.18738K562TARDBP
chr12108526318108526369+intron-Distal4.144494.13603K562TARDBP
chr12108525920108525974+intron-Distal3.551923.56210K562EIF4G2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for WSCD2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for WSCD2 is not available on ENCORE database.

  • 38 RBPs can affect the levels of WSCD2.  








The Knockdown/knockout RNA-Seq assay for WSCD2 is not available on ENCORE database.





38 RBPs can affect the gene expression of WSCD2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
WSCD2ENSG00000075035.529.9722084.67130-1.498204.831604.11650K562AGGF1
WSCD2ENSG00000075035.546.0255093.04190-1.015403.250802.16370K562AKAP8
WSCD2ENSG00000075035.5122.1309068.235700.839702.397001.84450K562AQR
WSCD2ENSG00000075035.5150.4302084.595100.830302.975402.06940K562BOP1
WSCD2ENSG00000075035.5254.11940126.489901.006405.888203.70190K562CKAP4
WSCD2ENSG00000075035.5153.1660089.949500.767802.985602.17100K562CPSF6
WSCD2ENSG00000075035.5189.08450123.222600.617702.589801.41920K562DDX21
WSCD2ENSG00000075035.565.31030115.65900-0.824503.134602.44730K562DDX47
WSCD2ENSG00000075035.526.7125066.72350-1.320703.815502.99200K562EIF2S2
WSCD2ENSG00000075035.5220.24700142.580800.627203.068302.08090K562EIF4G2
WSCD2ENSG00000075035.5128.5431069.617900.884603.557002.09710K562EXOSC5
WSCD2ENSG00000075035.5166.0668091.520300.859503.597002.61710K562FMR1
WSCD2ENSG00000075035.539.93180135.85820-1.7665010.107809.03490K562FXR1
WSCD2ENSG00000075035.5167.3962085.880100.962804.373903.38170K562GPKOW
WSCD2ENSG00000075035.5126.0749043.235201.543906.925106.02110K562HNRNPC
WSCD2ENSG00000075035.526.0684081.83510-1.650406.240904.88750K562HNRNPU
WSCD2ENSG00000075035.5189.0242073.329601.366004.425503.21620K562KRR1
WSCD2ENSG00000075035.5159.3076083.828400.926203.898802.84720K562METAP2
WSCD2ENSG00000075035.5186.5140082.901101.169704.844903.17490K562PABPC1
WSCD2ENSG00000075035.5139.1057080.017400.797702.776301.42470K562PCBP1
WSCD2ENSG00000075035.513.2049062.49350-2.242606.001704.89650K562PRPF8
WSCD2ENSG00000075035.536.4950079.51380-1.123503.657102.90500K562PTBP1
WSCD2ENSG00000075035.5257.50490162.126800.667403.611202.51520K562PUM2
WSCD2ENSG00000075035.541.6441087.37390-1.069102.698502.16020K562PUS1
WSCD2ENSG00000075035.542.3917085.13410-1.006002.809002.21230K562RBM15
WSCD2ENSG00000075035.5156.9705078.615400.997502.955101.38420K562SBDS
WSCD2ENSG00000075035.583.6555044.131800.922502.661601.42420K562SLBP
WSCD2ENSG00000075035.5178.64880109.970700.699903.241501.96820K562SRSF7
WSCD2ENSG00000075035.5128.7438062.382801.045204.158302.56710K562STAU1
WSCD2ENSG00000075035.513.1201068.13010-2.376508.124106.70870K562SYNCRIP
WSCD2ENSG00000075035.592.5083037.285001.310904.315703.12810K562TIAL1
WSCD2ENSG00000075035.579.3760039.605301.002902.564601.66050K562TRIM56
WSCD2ENSG00000075035.5146.8306060.776601.272506.133403.91330K562TRIP6
WSCD2ENSG00000075035.5296.43350175.398800.757004.544102.75340K562UBE2L3
WSCD2ENSG00000075035.5162.71910100.734600.691702.982802.23640K562UPF1
WSCD2ENSG00000075035.5114.9090064.460600.833902.606201.44320K562UTP3
WSCD2ENSG00000075035.5183.1918086.196501.087606.318804.96250K562WDR3
WSCD2ENSG00000075035.5180.0598076.867401.227904.173903.07750K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for WSCD2 is not available on ENCORE database.






No RBPs affect the alternative splcing events of WSCD2 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for WSCD2 is not avaliable on ENCORE database.