TMEM110

General Information

Gene Name       : TMEM110
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TMEM110)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TMEM110 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TMEM110 RNA is bound by 4 proteins.  







eCLIP assay for TMEM110 is not avaliable on ENCORE database.





4 proteins are bound to TMEM110 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr35287332852873421-3'-UTR,intron-Distal4.325273.70195HepG2UPF1
chr35287429052874353-3'-UTR,intron-Distal,intron-Proximal4.239964.19989HepG2UPF1
chr35287436152874435-3'-UTR,intron-Distal,intron-Proximal4.700185.36996HepG2PCBP2
chr35287360752873727-3'-UTR,intron-Distal4.589455.94150HepG2UPF1
chr35293146952931558-5'-UTR,intron-Distal7.0666820.25233HepG2DDX3X
chr35293140752931469-5'-UTR,CDS,intron-Distal5.7662316.18801HepG2DDX3X
chr35287682452876903-CDS,intron-Distal,intron-Proximal4.627123.79199HepG2PPIG
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TMEM110 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TMEM110 is not available on ENCORE database.

  • 51 RBPs can affect the levels of TMEM110.  








The Knockdown/knockout RNA-Seq assay for TMEM110 is not available on ENCORE database.





51 RBPs can affect the gene expression of TMEM110 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TMEM110ENSG00000213533.7271.49790624.70930-1.2022015.4799014.08790HepG2AUH
TMEM110ENSG00000213533.7288.90090414.69830-0.521502.928202.24860HepG2CKAP4
TMEM110ENSG00000213533.7137.85070245.84950-0.834704.579603.71450HepG2CPSF6
TMEM110ENSG00000213533.7249.69750354.35910-0.505002.621801.54560HepG2CPSF7
TMEM110ENSG00000213533.7362.65690453.64490-0.323002.119301.54460HepG2CELF1
TMEM110ENSG00000213533.7578.08090346.472400.738406.732005.72170HepG2DDX21
TMEM110ENSG00000213533.7217.47590339.12500-0.641004.010502.89800HepG2DDX24
TMEM110ENSG00000213533.7127.89520279.18190-1.126205.412104.05960HepG2DDX59
TMEM110ENSG00000213533.7529.28540396.922800.415102.964802.26600HepG2DKC1
TMEM110ENSG00000213533.7155.01120330.21530-1.091009.601907.69110HepG2FASTKD2
TMEM110ENSG00000213533.7212.81100337.74010-0.666304.229803.26840HepG2FUBP3
TMEM110ENSG00000213533.7427.61270271.755500.653904.441203.64740HepG2HNRNPA1
TMEM110ENSG00000213533.7494.20850302.276500.709205.377504.43700HepG2HNRNPC
TMEM110ENSG00000213533.7303.71430444.46270-0.549305.231304.32930HepG2HNRNPL
TMEM110ENSG00000213533.7237.54100306.72440-0.368802.023801.38520HepG2ILF2
TMEM110ENSG00000213533.7610.45610452.177200.432902.100801.38520HepG2LARP4
TMEM110ENSG00000213533.7179.79140295.26880-0.715703.198101.88960HepG2NAA15
TMEM110ENSG00000213533.7815.79570589.887900.467702.279501.70250HepG2NCBP2
TMEM110ENSG00000213533.7257.10520380.31740-0.564802.323101.33030HepG2NONO
TMEM110ENSG00000213533.7435.78580560.90790-0.364102.933902.31210HepG2PCBP1
TMEM110ENSG00000213533.7791.48310461.783700.777208.006707.06340HepG2PUF60
TMEM110ENSG00000213533.7770.27170422.592100.8660010.572809.50240HepG2PUS1
TMEM110ENSG00000213533.7624.16290332.228600.909606.459605.05920HepG2RPS10
TMEM110ENSG00000213533.7554.47100402.152400.463302.434801.68050HepG2RPS2
TMEM110ENSG00000213533.7207.12010504.57470-1.2846021.4578020.18460HepG2SRSF9
TMEM110ENSG00000213533.7999.90280587.888100.7661014.8271013.82890HepG2SSB
TMEM110ENSG00000213533.7191.09030373.95940-0.968604.535602.81950HepG2SUGP2
TMEM110ENSG00000213533.7157.22820412.16520-1.3904012.6632011.39410HepG2SUPV3L1
TMEM110ENSG00000213533.7454.08430557.42360-0.295801.998901.50950HepG2TAF15
TMEM110ENSG00000213533.7185.52890276.24150-0.574303.115302.05950HepG2TFIP11
TMEM110ENSG00000213533.7345.63350512.27100-0.567703.635502.68270HepG2TIA1
TMEM110ENSG00000213533.7162.75460291.78090-0.842206.108205.41790HepG2TIAL1
TMEM110ENSG00000213533.7334.61590477.42830-0.512802.581301.77260HepG2UBE2L3
TMEM110ENSG00000213533.7330.53170424.52490-0.361101.941401.42150HepG2UTP3
TMEM110ENSG00000213533.7193.97490332.57920-0.777803.599202.13810HepG2XRCC5
TMEM110ENSG00000213533.7145.95910295.92350-1.019709.450708.33350HepG2ZC3H8
TMEM110ENSG00000213533.7173.16630309.80750-0.839204.764804.05380K562AGGF1
TMEM110ENSG00000213533.7139.75280322.36260-1.2058010.710709.31440K562AKAP8L
TMEM110ENSG00000213533.7231.39500338.22450-0.547603.675702.61130K562ATP5C1
TMEM110ENSG00000213533.7259.07890363.48850-0.488502.781601.31510K562DDX19B
TMEM110ENSG00000213533.7343.89100214.500700.680905.407204.54040K562DDX47
TMEM110ENSG00000213533.7371.75890220.659600.752406.468305.43590K562EIF2S2
TMEM110ENSG00000213533.7134.7499066.569801.017203.101502.02990K562EIF3A
TMEM110ENSG00000213533.7153.66170215.01010-0.484602.216401.41840K562HNRNPU
TMEM110ENSG00000213533.7389.47730201.416800.951306.194905.01580K562HSPD1
TMEM110ENSG00000213533.7258.82900383.26750-0.566403.446502.41310K562MBNL1
TMEM110ENSG00000213533.7167.71070268.64090-0.679702.861201.96200K562NAA15
TMEM110ENSG00000213533.7417.80140321.627900.377302.091101.38130K562PUF60
TMEM110ENSG00000213533.7131.55840319.73890-1.2812010.921909.89160K562PUS1
TMEM110ENSG00000213533.7201.35740311.50120-0.629503.995303.29860K562RBM15
TMEM110ENSG00000213533.7239.54250137.576400.799903.492602.57180K562RPS19
TMEM110ENSG00000213533.7152.4183088.358600.786502.546601.59080K562RPS3
TMEM110ENSG00000213533.7242.28070163.234000.569602.468601.78850K562UPF1
TMEM110ENSG00000213533.7159.5895092.243400.790702.845401.62650K562UTP3
TMEM110ENSG00000213533.7210.50070145.261600.535102.742801.89980K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TMEM110 is not available on ENCORE database.





2 RBPs can affect the splicing of TMEM110 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SETMEM110ENSG00000213533.7chr3-528777365287781452876826528769765287884452878957-0.269000.002530.03056excludedHepG2U2AF2
SETMEM110ENSG00000213533.7chr3-5288148352881567528788445287895752883807528839290.283000.004320.05565includedK562PUS1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for TMEM110 is not avaliable on ENCORE database.