TIGD1

General Information

Gene Name       : TIGD1
Gene ID             : ENSG00000221944.7
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TIGD1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TIGD1ENSG00000221944.74.153.533.84ENCSR000AEF
HepG2TIGD1ENSG00000221944.73.895.614.75ENCSR985KAT
K562TIGD1ENSG00000221944.75.074.474.77ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TIGD1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TIGD1 RNA is bound by 3 proteins.  







eCLIP assay for TIGD1 is not avaliable on ENCORE database.





3 proteins are bound to TIGD1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr2233414988233415042-5'-UTR3.203473.77680K562TIA1
chr2233415144233415228-5'-UTR6.9786968.52043HepG2XPO5
chr2233415102233415220-5'-UTR3.036904.23993HepG2NCBP2
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TIGD1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TIGD1 is not available on ENCORE database.

  • 60 RBPs can affect the levels of TIGD1.  








The Knockdown/knockout RNA-Seq assay for TIGD1 is not available on ENCORE database.





60 RBPs can affect the gene expression of TIGD1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TIGD1ENSG00000221944.387.18750127.36460-0.546801.853101.33770HepG2ACO1
TIGD1ENSG00000221944.335.67240192.60950-2.4328016.2743015.09400HepG2AKAP1
TIGD1ENSG00000221944.3197.38730267.97920-0.441102.294901.65980HepG2AUH
TIGD1ENSG00000221944.365.56470179.89970-1.456208.521207.54000HepG2BOP1
TIGD1ENSG00000221944.3100.44610171.58230-0.772503.101602.28870HepG2CALR
TIGD1ENSG00000221944.358.85390151.41030-1.363306.419005.27510HepG2CIRBP
TIGD1ENSG00000221944.3253.03300127.354200.990408.058807.03910HepG2CKAP4
TIGD1ENSG00000221944.3104.07510165.16520-0.666302.234501.60800HepG2CPSF6
TIGD1ENSG00000221944.3123.06980184.50380-0.584202.045901.49950HepG2DDX3X
TIGD1ENSG00000221944.3201.13320132.098700.606402.232401.53080HepG2DDX55
TIGD1ENSG00000221944.353.02790158.49620-1.579608.056607.05480HepG2DDX6
TIGD1ENSG00000221944.3175.82960121.857900.528902.040801.44550HepG2DKC1
TIGD1ENSG00000221944.384.53270152.36270-0.849903.083902.45870HepG2EIF2S1
TIGD1ENSG00000221944.3274.40610200.396600.453402.210501.44740HepG2EIF4G1
TIGD1ENSG00000221944.3184.7721099.445800.893704.466901.90480HepG2EXOSC5
TIGD1ENSG00000221944.3194.5596097.970400.989705.219002.88670HepG2EXOSC9
TIGD1ENSG00000221944.3107.70760187.24800-0.797803.108002.43430HepG2GPKOW
TIGD1ENSG00000221944.3349.94600159.586301.132709.011607.80740HepG2HNRNPK
TIGD1ENSG00000221944.384.68640178.69240-1.077304.957004.13970HepG2HNRNPLL
TIGD1ENSG00000221944.3191.25020135.842200.493402.367101.68140HepG2ILF2
TIGD1ENSG00000221944.3391.94330174.925101.163809.591008.45180HepG2NCBP2
TIGD1ENSG00000221944.3219.42500126.207400.797803.508102.34380HepG2PCBP2
TIGD1ENSG00000221944.3238.47510101.941801.226007.695706.42830HepG2PRPF8
TIGD1ENSG00000221944.3307.04200192.274400.675204.055603.34850HepG2PUF60
TIGD1ENSG00000221944.3105.59810203.95830-0.949705.318304.40200HepG2PUM2
TIGD1ENSG00000221944.3106.45910162.49140-0.610102.264201.64920HepG2RBM25
TIGD1ENSG00000221944.3353.37870167.351401.078207.906506.22210HepG2RBM27
TIGD1ENSG00000221944.3190.30080119.903000.666302.603901.33390HepG2SART3
TIGD1ENSG00000221944.391.05510176.88200-0.958004.319903.45640HepG2SF3B1
TIGD1ENSG00000221944.3287.87220172.116900.741904.792704.04740HepG2SF3B4
TIGD1ENSG00000221944.378.22210196.80800-1.331105.995204.83940HepG2SNRNP70
TIGD1ENSG00000221944.3191.05340290.45100-0.604303.749203.19300HepG2SRFBP1
TIGD1ENSG00000221944.3129.98170189.84160-0.546502.322301.74270HepG2SRSF5
TIGD1ENSG00000221944.3206.53220110.765300.898804.579903.12950HepG2STIP1
TIGD1ENSG00000221944.3331.46010215.903400.618304.575403.81200HepG2SUCLG1
TIGD1ENSG00000221944.3330.93120161.471301.035209.481208.54370HepG2TAF15
TIGD1ENSG00000221944.386.89790130.37420-0.585302.117701.61190HepG2TRIM56
TIGD1ENSG00000221944.371.55670217.78540-1.605703.811102.64210HepG2U2AF2
TIGD1ENSG00000221944.3279.64760141.590700.981808.059307.12320HepG2UTP3
TIGD1ENSG00000221944.3101.82900161.29380-0.663503.027202.46270HepG2ZNF622
TIGD1ENSG00000221944.3227.66320121.689500.903604.606802.89880HepG2ZRANB2
TIGD1ENSG00000221944.3265.52770365.28870-0.460202.835802.26130K562AGGF1
TIGD1ENSG00000221944.3180.22840288.16030-0.677003.954602.41220K562CIRBP
TIGD1ENSG00000221944.3839.66110640.297100.391002.932701.93050K562CELF1
TIGD1ENSG00000221944.3296.95800380.95090-0.359302.087901.50920K562DDX47
TIGD1ENSG00000221944.3130.04060224.68900-0.789003.823402.58640K562EIF3D
TIGD1ENSG00000221944.3148.88830218.00440-0.550102.524801.76420K562EIF3G
TIGD1ENSG00000221944.3372.82870520.71170-0.482003.867802.75980K562EIF4G2
TIGD1ENSG00000221944.3378.33800275.353700.458302.672201.61850K562HNRNPA1
TIGD1ENSG00000221944.3300.69580221.593800.440301.798701.30450K562HNRNPC
TIGD1ENSG00000221944.3411.32190268.559600.614903.770002.30440K562HNRNPK
TIGD1ENSG00000221944.3407.22680304.894400.417402.550701.69150K562HNRNPU
TIGD1ENSG00000221944.3165.79890282.56380-0.769105.189804.02980K562MAGOH
TIGD1ENSG00000221944.3441.44790303.593300.540004.630703.69600K562NSUN2
TIGD1ENSG00000221944.3196.57060323.53680-0.718902.183201.32500K562PABPN1
TIGD1ENSG00000221944.3456.87710592.08830-0.374002.684301.73760K562PUM2
TIGD1ENSG00000221944.3265.82100376.99420-0.504102.516601.99300K562PUS1
TIGD1ENSG00000221944.3243.16120367.28570-0.595004.105303.40020K562RBM15
TIGD1ENSG00000221944.3123.75500208.02670-0.749303.117402.24750K562RPS19
TIGD1ENSG00000221944.3340.61080204.449500.736302.634801.58110K562SAFB
TIGD1ENSG00000221944.3182.36460269.10840-0.561402.834702.12020K562SRSF1
TIGD1ENSG00000221944.3170.03860272.38260-0.679803.768002.93660K562TARDBP
TIGD1ENSG00000221944.3154.32680218.76860-0.503402.298801.56810K562U2AF2
TIGD1ENSG00000221944.3211.49760286.42030-0.437502.487301.68300K562WDR43
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TIGD1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of TIGD1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for TIGD1 is not avaliable on ENCORE database.