SCIN

General Information

Gene Name : SCIN
Gene ID : ENSG00000006747.14
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: SCIN)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	SCIN	ENSG00000006747.14	1.63	0.98	1.30	ENCSR000AEF
HepG2	SCIN	ENSG00000006747.14	0.02	0.00	0.01	ENCSR985KAT
K562	SCIN	ENSG00000006747.14	8.23	8.48	8.36	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary

RNA Targets

eCLIP assay for SCIN is not avaliable on ENCORE database.

Proteins bound to RNA

NO known proteins bind on SCIN RNA with finished eCLIP experiments on ENCORE database.

eCLIP assay for SCIN is not avaliable on ENCORE database.

NO known proteins are bound to SCIN RNA with finished eCLIP experiments on ENCORE database.

eCLIP assay for SCIN is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for SCIN is not available on ENCORE database.
82 RBPs can affect the levels of SCIN.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for SCIN is not available on ENCORE database.

82 RBPs can affect the gene expression of SCIN :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
SCIN	ENSG00000006747.10	183.22570	761.82690	-2.05580	49.55330	46.80360	K562	SYNCRIP
SCIN	ENSG00000006747.10	195.35300	648.83820	-1.73180	38.15920	36.10270	K562	EIF2S2
SCIN	ENSG00000006747.10	1389.18990	641.81570	1.11390	29.33390	25.77390	K562	DDX21
SCIN	ENSG00000006747.10	2892.48030	1414.17810	1.03220	27.37450	24.82750	K562	CELF1
SCIN	ENSG00000006747.10	1337.01500	611.67920	1.12810	22.80520	20.13440	K562	MATR3
SCIN	ENSG00000006747.10	1211.39780	722.89010	0.74470	18.23000	16.54380	K562	NSUN2
SCIN	ENSG00000006747.10	1085.94240	572.76310	0.92280	19.06440	16.10860	K562	SRSF7
SCIN	ENSG00000006747.10	2513.45400	1198.86090	1.06790	18.24980	15.88830	K562	ZC3H8
SCIN	ENSG00000006747.10	1171.12360	648.37640	0.85290	16.37490	14.30860	K562	HNRNPU
SCIN	ENSG00000006747.10	1228.15280	655.86470	0.90490	15.83330	13.72190	K562	WDR3
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 82 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for SCIN is not available on ENCORE database.

4 RBPs can affect the splicing of SCIN :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	SCIN	ENSG00000006747.10	chr7	+	12683762	12683940			12679971	12680142	12684208	12684330	-0.35000	0.00000	0.00001	excluded	K562	SRSF1
MXE	SCIN	ENSG00000006747.10	chr7	+	12629656	12629825	12635894	12636051	12628552	12628694	12644138	12644288	-0.28000	0.00137	0.02264	2included	K562	DROSHA
MXE	SCIN	ENSG00000006747.10	chr7	+	12629656	12629825	12635894	12636051	12628552	12628694	12644138	12644288	-0.28000	0.00375	0.05341	2included	K562	HNRNPUL1
SE	SCIN	ENSG00000006747.10	chr7	+	12635894	12636051			12629053	12629198	12644138	12644288	0.18900	0.00532	0.04890	included	K562	AQR

Showing 1 to 4 of 4 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

SCIN

General Information

Functions

Localization

Domains (AlphaFold: SCIN)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for SCIN is not avaliable on ENCORE database.

NO known proteins are bound to SCIN RNA with finished eCLIP experiments on ENCORE database.

eCLIP assay for SCIN is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for SCIN is not available on ENCORE database.

82 RBPs can affect the gene expression of SCIN :

The Knockdown/knockout RNA-Seq assay for SCIN is not available on ENCORE database.

4 RBPs can affect the splicing of SCIN :

The Knockdown/knockout RNA-Seq assay for SCIN is not avaliable on ENCORE database.