SCIN

General Information

Gene Name       : SCIN
Gene ID             : ENSG00000006747.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: SCIN)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878SCINENSG00000006747.141.630.981.30ENCSR000AEF
HepG2SCINENSG00000006747.140.020.000.01ENCSR985KAT
K562SCINENSG00000006747.148.238.488.36ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for SCIN is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on SCIN RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for SCIN is not avaliable on ENCORE database.






NO known proteins are bound to SCIN RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for SCIN is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for SCIN is not available on ENCORE database.

  • 82 RBPs can affect the levels of SCIN.  








The Knockdown/knockout RNA-Seq assay for SCIN is not available on ENCORE database.





82 RBPs can affect the gene expression of SCIN :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
SCINENSG00000006747.10272.63130415.12220-0.606604.096802.62440K562AARS
SCINENSG00000006747.10451.98100254.211200.830103.365001.46850K562ADAR
SCINENSG00000006747.10856.487901030.51540-0.266902.234201.71520K562AGGF1
SCINENSG00000006747.101466.069801072.300500.451104.551403.70650K562AKAP8L
SCINENSG00000006747.10663.597801014.54250-0.612406.639404.61550K562APOBEC3C
SCINENSG00000006747.10894.747801125.10610-0.330503.079002.11290K562ATP5C1
SCINENSG00000006747.101048.63120558.401200.9090015.6792012.51070K562CEBPZ
SCINENSG00000006747.10963.23610625.018000.623906.520004.60690K562CIRBP
SCINENSG00000006747.101670.469401003.890100.734604.896003.43420K562CNOT7
SCINENSG00000006747.10746.36000555.370200.426303.404402.53160K562CPSF6
SCINENSG00000006747.102892.480301414.178101.0322027.3745024.82750K562CELF1
SCINENSG00000006747.10257.34330457.34110-0.829603.652401.44370K562DAZAP1
SCINENSG00000006747.101389.18990641.815701.1139029.3339025.77390K562DDX21
SCINENSG00000006747.10341.06820542.55040-0.669707.557805.37180K562DDX27
SCINENSG00000006747.10304.03390436.12240-0.520503.489502.30310K562DDX3X
SCINENSG00000006747.101407.86370856.298600.717207.363506.36960K562DDX47
SCINENSG00000006747.10388.29610278.696300.478402.623101.33370K562DHX30
SCINENSG00000006747.10754.609101153.85630-0.612709.325707.52070K562DKC1
SCINENSG00000006747.10898.29680536.904700.742405.824203.94800K562EEF2
SCINENSG00000006747.10195.35300648.83820-1.7318038.1592036.10270K562EIF2S2
SCINENSG00000006747.10398.85990253.208300.655502.952101.91070K562EIF3A
SCINENSG00000006747.10303.50380410.36210-0.435202.871901.68870K562EIF4B
SCINENSG00000006747.10853.78190624.008800.452203.620802.64070K562FIP1L1
SCINENSG00000006747.10249.50280394.38910-0.660604.057202.65990K562FKBP4
SCINENSG00000006747.10688.58390432.508500.670805.042503.16850K562FUS
SCINENSG00000006747.10234.94240473.86850-1.0122012.1296010.95590K562FXR1
SCINENSG00000006747.10347.54540520.01640-0.581403.934602.19870K562GEMIN5
SCINENSG00000006747.10903.85170618.841000.546406.666804.94360K562GLRX3
SCINENSG00000006747.10801.99680585.522700.453803.928202.65160K562HNRNPA1
SCINENSG00000006747.10732.96800454.171700.690407.067506.15560K562HNRNPC
SCINENSG00000006747.10214.68680405.60030-0.917807.646505.67390K562HNRNPF
SCINENSG00000006747.10502.36780773.93260-0.623504.767603.33700K562HNRNPL
SCINENSG00000006747.10263.60480513.29000-0.961408.149306.41090K562HNRNPM
SCINENSG00000006747.101171.12360648.376400.8529016.3749014.30860K562HNRNPU
SCINENSG00000006747.10501.42470845.97610-0.754606.401705.20630K562HSPD1
SCINENSG00000006747.101043.09400642.096600.699906.112503.47470K562IGF2BP1
SCINENSG00000006747.10372.16230592.98590-0.672106.312104.39810K562IGF2BP3
SCINENSG00000006747.10549.22910260.092501.0783011.112808.35570K562ILF3
SCINENSG00000006747.10228.76070405.03400-0.824206.373403.98940K562LSM11
SCINENSG00000006747.10416.80140612.87770-0.556203.440802.49820K562MAGOH
SCINENSG00000006747.101337.01500611.679201.1281022.8052020.13440K562MATR3
SCINENSG00000006747.10662.515601274.81510-0.9443016.0526013.62770K562MBNL1
SCINENSG00000006747.102273.690101225.555300.8915014.9446012.53970K562MSI2
SCINENSG00000006747.10799.62510650.634800.297402.517401.74530K562MTPAP
SCINENSG00000006747.10296.74310454.97760-0.616604.714803.10570K562NCBP2
SCINENSG00000006747.101211.39780722.890100.7447018.2300016.54380K562NSUN2
SCINENSG00000006747.10619.829701129.08830-0.865202.404701.49560K562PABPN1
SCINENSG00000006747.10781.92970598.947000.384503.089601.66030K562PCBP1
SCINENSG00000006747.10411.51950545.36330-0.406302.439301.52400K562PCBP2
SCINENSG00000006747.101799.13730990.209800.8614011.301109.62300K562PCBP3
SCINENSG00000006747.101184.36530759.514600.640908.710907.32260K562POLR2G
SCINENSG00000006747.10291.60380504.72950-0.791506.459405.31230K562PRPF8
SCINENSG00000006747.10193.71520407.21930-1.0719010.150808.17940K562PSIP1
SCINENSG00000006747.10396.58880595.42700-0.586305.317904.42300K562PTBP1
SCINENSG00000006747.10887.703001254.51390-0.499005.029403.93030K562PUF60
SCINENSG00000006747.101100.076801334.71140-0.278902.459201.45800K562PUM1
SCINENSG00000006747.101025.338501307.40690-0.350604.258703.06050K562PUM2
SCINENSG00000006747.10344.67320466.53260-0.436702.732901.41060K562RBM25
SCINENSG00000006747.10628.98660481.810000.384503.075701.39880K562RPS10
SCINENSG00000006747.10721.76340953.52500-0.401702.506801.56010K562RPS3
SCINENSG00000006747.101183.50680515.951601.1977013.6512010.88040K562RRP9
SCINENSG00000006747.10403.97890676.77750-0.744407.673105.91000K562SAFB
SCINENSG00000006747.10442.824001033.01110-1.222103.125201.82320K562SF1
SCINENSG00000006747.10399.90170511.43990-0.354902.240601.47320K562SF3B4
SCINENSG00000006747.10549.71770274.160601.0036010.924208.58980K562SLBP
SCINENSG00000006747.10244.25120352.23270-0.528202.693201.68680K562SRFBP1
SCINENSG00000006747.101101.48140730.838600.591709.681108.04370K562SRPK2
SCINENSG00000006747.10368.58030583.68390-0.663206.150405.10470K562SRSF1
SCINENSG00000006747.101085.94240572.763100.9228019.0644016.10860K562SRSF7
SCINENSG00000006747.10887.75850504.647900.814806.299904.24790K562SSB
SCINENSG00000006747.101268.77110818.689300.631906.907904.70960K562SSRP1
SCINENSG00000006747.101175.29020748.765300.650306.381504.40710K562STAU1
SCINENSG00000006747.10183.22570761.82690-2.0558049.5533046.80360K562SYNCRIP
SCINENSG00000006747.10800.60380482.761200.729703.610901.85650K562TAF15
SCINENSG00000006747.10706.88820512.679500.463303.391601.61180K562TBRG4
SCINENSG00000006747.10436.96980569.87220-0.383102.042601.34640K562TIA1
SCINENSG00000006747.10571.57760391.672800.545203.581402.51220K562TIAL1
SCINENSG00000006747.10660.17260492.384400.423003.393702.50650K562U2AF2
SCINENSG00000006747.10720.16210517.111300.477703.108702.02480K562UCHL5
SCINENSG00000006747.101228.15280655.864700.9049015.8333013.72190K562WDR3
SCINENSG00000006747.10999.11610682.044100.550708.949907.51890K562WDR43
SCINENSG00000006747.102513.454001198.860901.0679018.2498015.88830K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for SCIN is not available on ENCORE database.





4 RBPs can affect the splicing of SCIN :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SESCINENSG00000006747.10chr7+126837621268394012679971126801421268420812684330-0.350000.000000.00001excludedK562SRSF1
SESCINENSG00000006747.10chr7+1263589412636051126290531262919812644138126442880.189000.005320.04890includedK562AQR
MXESCINENSG00000006747.10chr7+1262965612629825126358941263605112628552126286941264413812644288-0.280000.001370.022642includedK562DROSHA
MXESCINENSG00000006747.10chr7+1262965612629825126358941263605112628552126286941264413812644288-0.280000.003750.053412includedK562HNRNPUL1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for SCIN is not avaliable on ENCORE database.