PPP1R16B

General Information

Gene Name       : PPP1R16B
Gene ID             : ENSG00000101445.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PPP1R16B)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PPP1R16BENSG00000101445.934.3243.9539.14ENCSR000AEF
HepG2PPP1R16BENSG00000101445.90.000.020.01ENCSR985KAT
K562PPP1R16BENSG00000101445.96.455.285.87ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PPP1R16B is not avaliable on ENCORE database.



Proteins bound to RNA
  • PPP1R16B RNA is bound by 4 proteins.  







eCLIP assay for PPP1R16B is not avaliable on ENCORE database.





4 proteins are bound to PPP1R16B RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr203754759937547710+3'-UTR3.376483.24309K562AGGF1
chr203755106237551124+3'-UTR4.786455.63383K562UPF1
chr203754912537549199+3'-UTR3.301326.76685K562YBX3
chr203755085137550917+3'-UTR4.680705.63383K562UPF1
chr203754818837548237+3'-UTR5.202896.81621K562UPF1
chr203754811237548167+3'-UTR4.636674.46422K562UPF1
chr203754769237547794+3'-UTR3.972477.50442K562UPF1
chr203752496937525072+intron-Distal4.922534.40618K562PTBP1
chr203752519437525242+intron-Distal4.343323.42734K562PTBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PPP1R16B is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PPP1R16B is not available on ENCORE database.

  • 47 RBPs can affect the levels of PPP1R16B.  








The Knockdown/knockout RNA-Seq assay for PPP1R16B is not available on ENCORE database.





47 RBPs can affect the gene expression of PPP1R16B :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PPP1R16BENSG00000101445.516.112102.937402.455402.025301.47250HepG2GPKOW
PPP1R16BENSG00000101445.514.928402.602802.519802.217801.66960HepG2HNRNPU
PPP1R16BENSG00000101445.550.324706.603502.929907.935006.82550HepG2PUM2
PPP1R16BENSG00000101445.511.710201.849502.662401.936001.33430HepG2UPF1
PPP1R16BENSG00000101445.5531.53560365.138700.541603.641302.21680K562ABCF1
PPP1R16BENSG00000101445.5724.73550902.96670-0.317202.728402.16350K562AGGF1
PPP1R16BENSG00000101445.5360.97640621.99190-0.785007.359705.23200K562APOBEC3C
PPP1R16BENSG00000101445.5281.75960517.07600-0.875907.100906.23150K562AQR
PPP1R16BENSG00000101445.5806.45680985.85260-0.289802.292901.46900K562ATP5C1
PPP1R16BENSG00000101445.5440.97200345.057000.353802.241501.37720K562BCLAF1
PPP1R16BENSG00000101445.5368.28990251.845000.548203.278202.42200K562CPSF6
PPP1R16BENSG00000101445.5829.34550474.246000.8062010.941308.71170K562DDX3X
PPP1R16BENSG00000101445.5262.73980540.18660-1.0398015.3105013.89020K562DDX47
PPP1R16BENSG00000101445.5700.73060363.529700.9467014.9110013.44290K562EIF2S2
PPP1R16BENSG00000101445.5147.92670235.87310-0.673102.414301.48080K562EIF3A
PPP1R16BENSG00000101445.5179.81650350.54640-0.963106.951705.20410K562EIF3D
PPP1R16BENSG00000101445.5353.45070256.248300.463902.316001.53180K562FMR1
PPP1R16BENSG00000101445.5257.57120515.28870-1.0004012.6999011.49930K562FXR1
PPP1R16BENSG00000101445.5243.24540338.62940-0.477302.018801.42740K562G3BP2
PPP1R16BENSG00000101445.5509.53290328.356100.633804.052102.29600K562GEMIN5
PPP1R16BENSG00000101445.5345.64840484.45450-0.487103.094802.29830K562GRSF1
PPP1R16BENSG00000101445.5188.49270342.88420-0.863206.283605.41940K562HNRNPC
PPP1R16BENSG00000101445.5129.05370215.96480-0.742803.167902.16640K562HNRNPM
PPP1R16BENSG00000101445.5406.10890570.88860-0.491304.301703.17920K562HNRNPU
PPP1R16BENSG00000101445.5769.56460355.892201.1125015.1435013.35940K562HSPD1
PPP1R16BENSG00000101445.5501.08390332.153500.593104.399302.58980K562LARP7
PPP1R16BENSG00000101445.5320.77270437.86660-0.448903.189102.32080K562MTPAP
PPP1R16BENSG00000101445.5504.68730771.09340-0.611505.594003.42120K562NOL12
PPP1R16BENSG00000101445.5616.74860486.489900.342202.928202.16430K562NSUN2
PPP1R16BENSG00000101445.5301.00620490.24240-0.703704.916203.80800K562PCBP3
PPP1R16BENSG00000101445.5220.00570376.03640-0.773306.184604.99190K562POLR2G
PPP1R16BENSG00000101445.5177.29490318.70190-0.846105.347604.30340K562PRPF8
PPP1R16BENSG00000101445.5305.64830514.82200-0.752206.344405.37390K562PTBP1
PPP1R16BENSG00000101445.5535.28410769.10530-0.522904.595903.54900K562PUF60
PPP1R16BENSG00000101445.5378.31080931.78380-1.3004019.8921018.46340K562PUS1
PPP1R16BENSG00000101445.5706.35040907.90180-0.362203.042602.42610K562RBM15
PPP1R16BENSG00000101445.5738.53450493.490400.581505.294104.08730K562RBM22
PPP1R16BENSG00000101445.5232.54990335.04560-0.526802.834501.73900K562SAFB
PPP1R16BENSG00000101445.5234.17870346.40360-0.564803.185101.62990K562SDAD1
PPP1R16BENSG00000101445.5637.21360491.844700.373503.256602.24950K562SRPK2
PPP1R16BENSG00000101445.5382.18050504.73060-0.401302.520801.84100K562SRSF1
PPP1R16BENSG00000101445.5204.61300377.16910-0.882307.871406.47380K562SYNCRIP
PPP1R16BENSG00000101445.5628.70810483.649000.378302.276601.30770K562TRA2A
PPP1R16BENSG00000101445.5428.15200306.940000.480102.797601.40920K562TRIP6
PPP1R16BENSG00000101445.5475.10220326.505300.541003.126302.03880K562UCHL5
PPP1R16BENSG00000101445.5339.14240459.00420-0.436603.478102.53800K562WDR43
PPP1R16BENSG00000101445.5225.78840488.22680-1.112606.594503.91260K562XRCC6
PPP1R16BENSG00000101445.5466.78380332.587500.488902.654001.47700K562XRN2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PPP1R16B is not available on ENCORE database.






No RBPs affect the alternative splcing events of PPP1R16B on ENCORE database.





The Knockdown/knockout RNA-Seq assay for PPP1R16B is not avaliable on ENCORE database.