NDUFAF6

General Information

Gene Name : NDUFAF6
Gene ID : ENSG00000156170.12
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: NDUFAF6)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	NDUFAF6	ENSG00000156170.12	16.08	20.33	18.20	ENCSR000AEF
HepG2	NDUFAF6	ENSG00000156170.12	13.56	22.23	17.89	ENCSR985KAT
K562	NDUFAF6	ENSG00000156170.12	18.58	16.64	17.61	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for NDUFAF6 is not avaliable on ENCORE database.

Proteins bound to RNA

NDUFAF6 RNA is bound by 18 proteins.

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eCLIP assay for NDUFAF6 is not avaliable on ENCORE database.

18 proteins are bound to NDUFAF6 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr8	96037313	96037422	+	5'-UTR,CDS,intron-Distal	5.11557	11.38399	K562	DDX3X
chr8	96000568	96000625	+	intron-Distal,intron-Proximal	4.10157	11.25083	HepG2	U2AF2
chr8	95961811	95961955	+	intron-Distal	4.50008	9.49794	HepG2	PRPF4
chr8	95961839	95961922	+	intron-Distal	5.10932	7.28703	HepG2	GTF2F1
chr8	96037413	96037605	+	5'-UTR,CDS,intron-Distal,intron-Proximal	5.11959	6.45599	K562	PRPF8
chr8	95908781	95908922	+	intron-Distal	4.72537	6.40665	K562	NONO
chr8	96037389	96037525	+	5'-UTR,CDS,intron-Distal,intron-Proximal	3.88215	6.18341	HepG2	PRPF8
chr8	95961779	95961925	+	intron-Distal	4.67175	6.14390	HepG2	NCBP2
chr8	95908763	95908865	+	intron-Distal	4.48066	5.60609	HepG2	CSTF2T
chr8	96061820	96061855	+	intron-Distal	3.73193	5.21542	K562	LSM11
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 25 entries

eCLIP assay for NDUFAF6 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for NDUFAF6 is not available on ENCORE database.
34 RBPs can affect the levels of NDUFAF6.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for NDUFAF6 is not available on ENCORE database.

34 RBPs can affect the gene expression of NDUFAF6 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
NDUFAF6	ENSG00000156170.8	310.88110	147.95390	1.07110	7.51060	6.44530	HepG2	MAGOH
NDUFAF6	ENSG00000156170.8	213.00910	95.18480	1.16200	7.34030	6.09730	HepG2	UCHL5
NDUFAF6	ENSG00000156170.8	327.57080	151.20130	1.11520	5.72620	4.73520	HepG2	RAVER1
NDUFAF6	ENSG00000156170.8	287.14000	148.79020	0.94840	5.35850	4.50540	HepG2	MATR3
NDUFAF6	ENSG00000156170.8	438.13100	275.07100	0.67150	4.55720	3.88390	K562	PUS1
NDUFAF6	ENSG00000156170.8	302.83310	477.62590	-0.65740	4.45370	3.74190	K562	AQR
NDUFAF6	ENSG00000156170.8	578.53970	413.66310	0.48390	4.47630	3.67460	K562	DDX47
NDUFAF6	ENSG00000156170.8	394.85650	269.18600	0.55260	3.80730	3.22460	HepG2	RBM22
NDUFAF6	ENSG00000156170.8	272.57670	160.66300	0.76250	3.89560	3.16450	HepG2	DDX3X
NDUFAF6	ENSG00000156170.8	902.20730	650.71810	0.47130	4.53120	3.13970	K562	PUM1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 35 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for NDUFAF6 is not available on ENCORE database.

11 RBPs can affect the splicing of NDUFAF6 :

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Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	NDUFAF6	ENSG00000156170.8	chr8	+	96048598	96048722	96047681	96047804	96053797	96053854	0.28100	0.00000	0.00001	included	HepG2	HNRNPK
SE	NDUFAF6	ENSG00000156170.8	chr8	+	96056704	96056823	96053797	96053854	96057772	96057875	0.66300	0.00000	0.00000	included	K562	HNRNPC
SE	NDUFAF6	ENSG00000156170.8	chr8	+	96059221	96059355	96057772	96057875	96060684	96060786	-0.21000	0.00000	0.00012	excluded	K562	HNRNPC
A3SS	NDUFAF6	ENSG00000156170.8	chr8	+	96057745	96057875	96057772	96057875	96053709	96053854	0.16100	0.00000	0.00002	longer	K562	AQR
A5SS	NDUFAF6	ENSG00000156170.8	chr8	+	96044222	96044326	96044222	96044322	96047681	96047804	0.51200	0.00000	0.00027	longer	K562	HNRNPL
SE	NDUFAF6	ENSG00000156170.8	chr8	+	96048529	96048722	96047681	96047804	96053797	96053854	0.23300	0.00001	0.00076	included	K562	HNRNPU
SE	NDUFAF6	ENSG00000156170.8	chr8	+	96048598	96048722	96047681	96047804	96053797	96053854	0.22000	0.00004	0.00641	included	HepG2	G3BP1
SE	NDUFAF6	ENSG00000156170.8	chr8	+	96048598	96048722	96047681	96047804	96053797	96053854	0.37200	0.00005	0.00368	included	HepG2	HNRNPU
SE	NDUFAF6	ENSG00000156170.8	chr8	+	96048598	96048722	96047681	96047804	96053797	96053854	0.17000	0.00007	0.09744	included	K562	EWSR1
A3SS	NDUFAF6	ENSG00000156170.8	chr8	+	96059186	96059315	96059221	96059315	96057772	96057875	0.07000	0.00015	0.00127	longer	K562	AQR

Showing 1 to 10 of 21 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

NDUFAF6

General Information

Functions

Localization

Domains (AlphaFold: NDUFAF6)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for NDUFAF6 is not avaliable on ENCORE database.

18 proteins are bound to NDUFAF6 RNA:

eCLIP assay for NDUFAF6 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for NDUFAF6 is not available on ENCORE database.

34 RBPs can affect the gene expression of NDUFAF6 :

The Knockdown/knockout RNA-Seq assay for NDUFAF6 is not available on ENCORE database.

11 RBPs can affect the splicing of NDUFAF6 :

The Knockdown/knockout RNA-Seq assay for NDUFAF6 is not avaliable on ENCORE database.