MTX1

General Information

Gene Name       : MTX1
Gene ID             : ENSG00000173171.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: MTX1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MTX1ENSG00000173171.1411.0929.7920.44ENCSR000AEF
HepG2MTX1ENSG00000173171.1455.4231.9943.70ENCSR985KAT
K562MTX1ENSG00000173171.1463.8553.8358.84ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MTX1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • MTX1 RNA is bound by 4 proteins.  







eCLIP assay for MTX1 is not avaliable on ENCORE database.





4 proteins are bound to MTX1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1155179030155179124+5'-UTR,CDS,intron-Proximal4.135985.56074HepG2NCBP2
chr1155180362155180416+CDS3.989103.83925K562YBX3
chr1155179050155179136+CDS,intron-Proximal4.476038.86236K562DDX3X
chr1155179051155179115+CDS4.961636.83552HepG2DDX3X
chr1155180411155180537+CDS,intron-Distal,intron-Proximal4.464547.15298K562AQR
chr1155181924155182010+CDS,intron-Distal3.120623.17197K562YBX3
chr1155180135155180207+CDS,intron-Proximal3.839675.82148K562DDX3X
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MTX1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MTX1 is not available on ENCORE database.

  • 50 RBPs can affect the levels of MTX1.  








The Knockdown/knockout RNA-Seq assay for MTX1 is not available on ENCORE database.





50 RBPs can affect the gene expression of MTX1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MTX1ENSG00000173171.10769.73660913.82200-0.247501.894901.30720HepG2AUH
MTX1ENSG00000173171.10435.30660271.599100.680504.838404.07520HepG2BOP1
MTX1ENSG00000173171.10681.97340332.200901.037607.632806.37260HepG2CNOT7
MTX1ENSG00000173171.10762.29130611.144400.318702.799302.15320HepG2CELF1
MTX1ENSG00000173171.10791.94730657.029400.269302.570801.85160HepG2DAZAP1
MTX1ENSG00000173171.10408.75430532.31600-0.381002.431701.79020HepG2DKC1
MTX1ENSG00000173171.10515.75830723.21580-0.487703.055802.38460HepG2EIF4A3
MTX1ENSG00000173171.10367.61840496.61330-0.433902.441401.41400HepG2ESF1
MTX1ENSG00000173171.10665.858201049.21810-0.6560011.004409.93490HepG2ETF1
MTX1ENSG00000173171.10464.06460676.98430-0.544803.716302.94850HepG2G3BP1
MTX1ENSG00000173171.10512.18890718.85250-0.489003.365402.37470HepG2G3BP2
MTX1ENSG00000173171.10262.46850372.19450-0.503901.936701.34470HepG2HNRNPC
MTX1ENSG00000173171.10751.66810598.472900.328703.313102.58080HepG2HNRNPL
MTX1ENSG00000173171.10534.83370688.09980-0.363501.957801.38080HepG2IGF2BP2
MTX1ENSG00000173171.10491.56600377.671100.380203.078902.30870HepG2ILF2
MTX1ENSG00000173171.10533.34910391.022900.447702.570101.47640HepG2LARP7
MTX1ENSG00000173171.10561.18070410.464800.451102.584001.41510HepG2LIN28B
MTX1ENSG00000173171.10454.29890757.14690-0.7369010.095909.17880HepG2PTBP1
MTX1ENSG00000173171.10817.14900659.763300.308602.394301.77000HepG2PUM2
MTX1ENSG00000173171.10376.51470566.73280-0.590004.101603.37790HepG2PUS1
MTX1ENSG00000173171.10663.03110819.93180-0.306402.121201.56200HepG2QKI
MTX1ENSG00000173171.10468.15210744.16990-0.668706.888305.86480HepG2RBM25
MTX1ENSG00000173171.10643.87220471.523200.449302.419301.49840HepG2RBM27
MTX1ENSG00000173171.10572.82950842.60180-0.556706.552505.77960HepG2NELFE
MTX1ENSG00000173171.10575.96180784.82340-0.446404.426703.67020HepG2RECQL
MTX1ENSG00000173171.10277.73730410.59440-0.564003.123902.29520HepG2RRP9
MTX1ENSG00000173171.10484.99830329.265200.558605.301604.46230HepG2SAFB2
MTX1ENSG00000173171.10619.68900788.22290-0.347102.896102.29400HepG2SF3B4
MTX1ENSG00000173171.10661.91910990.46820-0.581509.022508.26040HepG2SRFBP1
MTX1ENSG00000173171.10617.10590822.76040-0.415004.018303.47490HepG2SRSF1
MTX1ENSG00000173171.10513.10770669.38220-0.383603.445102.84360HepG2SRSF9
MTX1ENSG00000173171.10578.35070859.94270-0.572308.157207.36610HepG2SSB
MTX1ENSG00000173171.10396.54260739.60250-0.8993010.080109.11730HepG2TAF15
MTX1ENSG00000173171.10527.84080679.51610-0.364402.626501.81130HepG2TIA1
MTX1ENSG00000173171.10449.93000362.476700.311701.989701.49620HepG2TRIM56
MTX1ENSG00000173171.10363.11560495.19600-0.447602.163901.60170HepG2U2AF1
MTX1ENSG00000173171.10288.68420448.16890-0.634606.175305.23390HepG2ZC3H8
MTX1ENSG00000173171.10621.50130478.459700.377303.553302.95480HepG2ZNF622
MTX1ENSG00000173171.10653.97880887.20820-0.440003.177501.84880K562ABCF1
MTX1ENSG00000173171.10717.687801120.25360-0.642406.514605.67630K562AQR
MTX1ENSG00000173171.101241.099701650.72290-0.411505.171403.82880K562CELF1
MTX1ENSG00000173171.10856.21710676.230800.340402.951902.04290K562DKC1
MTX1ENSG00000173171.10512.88910375.357300.450303.436002.55490K562EIF3G
MTX1ENSG00000173171.10766.04430473.279100.694607.320905.99070K562EIF4A3
MTX1ENSG00000173171.10556.50210413.122400.429703.044101.67330K562EWSR1
MTX1ENSG00000173171.10735.92360492.189800.580206.626405.74760K562FXR1
MTX1ENSG00000173171.10145.64650313.52090-1.106107.439906.16490K562G3BP2
MTX1ENSG00000173171.10356.23510490.55280-0.461602.924702.31330K562HNRNPC
MTX1ENSG00000173171.10702.33890473.428700.568905.271604.10120K562MAGOH
MTX1ENSG00000173171.10533.04560746.26390-0.485406.127705.07730K562NSUN2
MTX1ENSG00000173171.10668.25800512.161900.383702.184001.51340K562PRPF8
MTX1ENSG00000173171.10596.01440459.984200.373702.592001.94580K562PTBP1
MTX1ENSG00000173171.101092.368801464.48320-0.422904.112403.12380K562PUF60
MTX1ENSG00000173171.101253.646101557.98380-0.313602.360101.38120K562PUM1
MTX1ENSG00000173171.10453.91240623.23270-0.457402.958402.40040K562PUS1
MTX1ENSG00000173171.10477.99840326.012700.552004.489503.39050K562SF3B4
MTX1ENSG00000173171.10272.85060387.19320-0.504903.145401.75940K562SSB
MTX1ENSG00000173171.10631.30270836.82090-0.406602.697801.35840K562SSRP1
MTX1ENSG00000173171.10497.64390677.07250-0.444203.482702.50280K562WDR3
MTX1ENSG00000173171.10946.191301262.05000-0.415603.817902.77390K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MTX1 is not available on ENCORE database.





17 RBPs can affect the splicing of MTX1 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEMTX1ENSG00000173171.10chr1+155181917155182010155180338155180418155182175155182358-0.215000.001160.02362excludedK562SF3B4
SEMTX1ENSG00000173171.10chr1+155181917155182010155180338155180418155182175155182358-0.169000.000000.00051excludedHepG2RBM22
SEMTX1ENSG00000173171.10chr1+155181917155182010155180338155180418155182175155182358-0.211000.000000.00022excludedK562PCBP1
SEMTX1ENSG00000173171.10chr1+155181917155182010155180338155180418155182175155182358-0.126000.000230.00801excludedHepG2HNRNPK
SEMTX1ENSG00000173171.10chr1+155181917155182010155180338155180418155182175155182358-0.182000.000000.00006excludedK562AQR
SEMTX1ENSG00000173171.10chr1+155181917155182010155180338155180418155182175155182358-0.191000.000010.00161excludedK562SUPV3L1
SEMTX1ENSG00000173171.10chr1+155181917155182010155180338155180418155182175155182358-0.106000.001440.08631excludedHepG2HNRNPL
SEMTX1ENSG00000173171.10chr1+1551819171551820101551803381551804181551821751551823580.089000.000970.09226includedHepG2SSB
SEMTX1ENSG00000173171.10chr1+155181917155182010155180338155180418155182175155182358-0.154000.000020.00192excludedHepG2PCBP1
SEMTX1ENSG00000173171.10chr1+155181917155182010155180338155180418155182175155182358-0.160000.000500.07564excludedK562SRSF7
SEMTX1ENSG00000173171.10chr1+155181917155182010155180338155180418155182175155182358-0.136000.000170.02419excludedHepG2TAF15
SEMTX1ENSG00000173171.10chr1+155181917155182010155180338155180418155182175155182358-0.167000.000050.00342excludedK562TARDBP
SEMTX1ENSG00000173171.10chr1+1551819171551820101551803381551804181551821751551823580.128000.000010.00051includedK562HNRNPU
SEMTX1ENSG00000173171.10chr1+155181917155182010155180338155180418155182175155182358-0.185000.000380.00856excludedK562HNRNPC
A5SSMTX1ENSG00000173171.10chr1+155180338155182010155180338155180418155182175155182358-0.226000.000300.05408shorterK562TARDBP
A5SSMTX1ENSG00000173171.10chr1+155180338155182010155180338155180418155182175155182358-0.266000.000000.00614shorterK562PCBP1
A5SSMTX1ENSG00000173171.10chr1+155180338155182010155180338155180418155182175155182358-0.155000.001570.02742shorterK562AQR
A5SSMTX1ENSG00000173171.10chr1+155180338155182010155180338155180418155182175155182358-0.256000.000030.00861shorterK562SUPV3L1
A5SSMTX1ENSG00000173171.10chr1+155180338155182010155180338155180418155182175155182358-0.179000.000670.07300shorterHepG2TAF15
A5SSMTX1ENSG00000173171.10chr1+155180338155182010155180338155180418155182175155182358-0.226000.000020.00359shorterHepG2RBM22
A5SSMTX1ENSG00000173171.10chr1+155180338155182010155180338155180418155182175155182358-0.184000.000460.03303shorterHepG2HNRNPK
A5SSMTX1ENSG00000173171.10chr1+155180338155182010155180338155180418155182175155182358-0.216000.000150.02287shorterHepG2PCBP1
A5SSMTX1ENSG00000173171.10chr1+1551803381551820101551803381551804181551821751551823580.185000.000230.04890longerK562HNRNPU
A5SSMTX1ENSG00000173171.10chr1+155180338155182010155180338155180418155182175155182358-0.270000.000000.00127shorterK562SRSF7
RIMTX1ENSG00000173171.10chr1+1551803381551820101551803381551804181551819171551820100.118000.005400.03314includedK562PUS1
RIMTX1ENSG00000173171.10chr1+155180338155182010155180338155180418155181917155182010-0.074000.005670.04890excludedK562AKAP8L
RIMTX1ENSG00000173171.10chr1+155180338155182010155180338155180418155181917155182010-0.070000.009680.08176excludedK562RBM15
RIMTX1ENSG00000173171.10chr1+1551803381551820101551803381551804181551819171551820100.054000.004420.04066includedHepG2RBM22
RIMTX1ENSG00000173171.10chr1+1551803381551820101551803381551804181551819171551820100.075000.000970.01210includedK562EFTUD2
RIMTX1ENSG00000173171.10chr1+1551803381551820101551803381551804181551819171551820100.172000.000000.00000includedK562AQR

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for MTX1 is not avaliable on ENCORE database.